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L3_106_000M1_scaffold_828

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Displaying items 1-30 of 68 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_106_000M1_scaffold_828_1
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(180..1121)
DNA (942bp) protein (314aa)
Uncharacterized protein n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BFT5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM63491.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
hypothetical protein
L3_106_000M1_scaffold_828_2
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1196..2314)
DNA (1119bp) protein (373aa)
CobW/P47K family protein n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BFT6_9FIRM
CobW/P47K family protein {ECO:0000313|EMBL:EDM63492.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
Putative GTPases (G3E family)
L3_106_000M1_scaffold_828_3
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2582..4564)
DNA (1983bp) protein (661aa)
Putative K(+)-stimulated pyrophosphate-energized sodium pump {ECO:0000256|HAMAP-Rule:MF_01129}; EC=3.6.1.1 {ECO:0000256|HAMAP-Rule:MF_01129};; Membrane-bound sodium-translocating pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01129}; Pyrophosphate-energized inorganic pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01129}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
vacuolar-type H(+)-translocating pyrophosphatase (EC:3.6.1.1)
Putative K(+)-stimulated pyrophosphate-energized sodium pump n=2 Tax=Dorea RepID=A6BFT7_9FIRM
L3_106_000M1_scaffold_828_4
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4758..5498)
DNA (741bp) protein (247aa)
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridylate synthase I {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA-uridine isomerase I {ECO:0000256|HAMAP-Rule:MF_00171}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
pseudouridylate synthase I (EC:5.4.99.12)
tRNA pseudouridine synthase A n=1 Tax=Dorea longicatena CAG:42 RepID=R7FVB6_9FIRM
L3_106_000M1_scaffold_828_5
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5596..6420)
DNA (825bp) protein (275aa)
Energy-coupling factor transporter transmembrane protein EcfT n=1 Tax=Dorea longicatena CAG:42 RepID=R7FU01_9FIRM
Energy-coupling factor transporter transmembrane protein EcfT {ECO:0000256|HAMAP-Rule:MF_01461}; Short=ECF transporter T component EcfT {ECO:0000256|HAMAP-Rule:MF_01461};; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
ABC-type cobalt transport system, permease component CbiQ and related transporters
L3_106_000M1_scaffold_828_6
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6417..7280)
DNA (864bp) protein (288aa)
Energy-coupling factor transporter ATP-binding protein EcfA {ECO:0000256|HAMAP-Rule:MF_01710}; Short=ECF transporter A component EcfA {ECO:0000256|HAMAP-Rule:MF_01710};; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01710};; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
ABC transporter, ATP-binding protein n=2 Tax=Dorea RepID=A6BFU0_9FIRM
ABC-type cobalt transport system, ATPase component
L3_106_000M1_scaffold_828_7
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7311..8165)
DNA (855bp) protein (285aa)
Energy-coupling factor transporter ATP-binding protein EcfA {ECO:0000256|HAMAP-Rule:MF_01710}; Short=ECF transporter A component EcfA {ECO:0000256|HAMAP-Rule:MF_01710};; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01710};; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
ABC transporter, ATP-binding protein n=2 Tax=Dorea RepID=A6BFU1_9FIRM
ABC-type cobalt transport system, ATPase component
L3_106_000M1_scaffold_828_8
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8242..8760)
DNA (519bp) protein (173aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU000493}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU000493};; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
Peptidyl-prolyl cis-trans isomerase n=2 Tax=Dorea RepID=A6BFU2_9FIRM
cyclophilin-type peptidyl-prolyl cis-trans isomerase
L3_106_000M1_scaffold_828_9
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8913..10586)
DNA (1674bp) protein (558aa)
Uncharacterized protein n=2 Tax=Dorea RepID=A6BFU3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM63499.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
arylsulfate sulfotransferase
L3_106_000M1_scaffold_828_10
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10683..11330)
DNA (648bp) protein (216aa)
Uncharacterized protein n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BFU4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM63500.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
hypothetical protein
L3_106_000M1_scaffold_828_11
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11513..12307)
DNA (795bp) protein (265aa)
Pyrroline-5-carboxylate reductase {ECO:0000256|HAMAP-Rule:MF_01925}; Short=P5C reductase {ECO:0000256|HAMAP-Rule:MF_01925};; Short=P5CR {ECO:0000256|HAMAP-Rule:MF_01925};; EC=1.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01925};; PCA reductase {ECO:0000256|HAMAP-Rule:MF_01925}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
pyrroline-5-carboxylate reductase (EC:1.5.1.2)
Pyrroline-5-carboxylate reductase n=1 Tax=Dorea longicatena CAG:42 RepID=R7FYE1_9FIRM
L3_106_000M1_scaffold_828_12
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12610..13251
DNA (642bp) protein (214aa)
Transcriptional regulator, GntR family n=2 Tax=Dorea RepID=A6BFU6_9FIRM
Transcriptional regulator GntR family {ECO:0000313|EMBL:CDE18716.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
hypothetical protein
L3_106_000M1_scaffold_828_13
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13318..13908)
DNA (591bp) protein (197aa)
Transcriptional regulator, TetR family n=2 Tax=Dorea RepID=A6BFU7_9FIRM
Transcriptional regulator, TetR family {ECO:0000313|EMBL:EDM63503.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
TetR family transcriptional regulator
L3_106_000M1_scaffold_828_14
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13990..14262)
DNA (273bp) protein (91aa)
Acylphosphatase {ECO:0000313|EMBL:EDM63504.1}; EC=3.6.1.7 {ECO:0000313|EMBL:EDM63504.1};; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
Acylphosphatases (EC:3.6.1.7)
Acylphosphatase n=2 Tax=Dorea RepID=A6BFU8_9FIRM
L3_106_000M1_scaffold_828_15
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14250..14414)
DNA (165bp) protein (55aa)
Uncharacterized protein n=1 Tax=Dorea longicatena CAG:42 RepID=R7FW14_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE18713.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
L3_106_000M1_scaffold_828_16
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14374..14910)
DNA (537bp) protein (179aa)
Guanosine polyphosphate pyrophosphohydrolases/synthetases (EC:3.1.7.2)
HD domain protein n=2 Tax=Dorea RepID=A6BFU9_9FIRM
HD domain protein {ECO:0000313|EMBL:CDE18712.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
L3_106_000M1_scaffold_828_17
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15135..15869
DNA (735bp) protein (245aa)
Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) (EC:1.1.1.100)
Oxidoreductase, short chain dehydrogenase/reductase family protein n=2 Tax=Dorea RepID=A6BFV0_9FIRM
Oxidoreductase short chain dehydrogenase/reductase family protein {ECO:0000313|EMBL:CDE18711.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
L3_106_000M1_scaffold_828_18
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15974..16726)
DNA (753bp) protein (251aa)
exodeoxyribonuclease III (EC:3.1.11.2)
Exodeoxyribonuclease III n=2 Tax=Dorea RepID=A6BFV1_9FIRM
Exodeoxyribonuclease III {ECO:0000313|EMBL:CDE18710.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
L3_106_000M1_scaffold_828_19
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16784..17518)
DNA (735bp) protein (245aa)
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridylate synthase I {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA-uridine isomerase I {ECO:0000256|HAMAP-Rule:MF_00171}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
pseudouridylate synthase I (EC:5.4.99.12)
tRNA pseudouridine synthase A n=2 Tax=Dorea RepID=A6BFV2_9FIRM
L3_106_000M1_scaffold_828_20
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17696..18145)
DNA (450bp) protein (150aa)
Transcriptional repressor NrdR n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BFV3_9FIRM
Transcriptional repressor NrdR {ECO:0000256|HAMAP-Rule:MF_00440, ECO:0000256|SAAS:SAAS00087559}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
transcriptional regulator NrdR
L3_106_000M1_scaffold_828_21
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18233..18481)
DNA (249bp) protein (83aa)
Sporulation protein, YlmC/YmxH family n=2 Tax=Dorea RepID=A6BFV4_9FIRM
Sporulation protein, YlmC/YmxH family {ECO:0000313|EMBL:EDM63510.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
sporulation protein, YlmC/YmxH family
L3_106_000M1_scaffold_828_22
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18647..18832)
DNA (186bp) protein (62aa)
Ferredoxin family protein n=1 Tax=Dorea longicatena CAG:42 RepID=R7FVL6_9FIRM
Ferredoxin family protein {ECO:0000313|EMBL:CDE18701.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
ferredoxin
L3_106_000M1_scaffold_828_23
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18898..19827)
DNA (930bp) protein (310aa)
Carbamate kinase (EC:2.7.2.2)
Carbamate kinase n=2 Tax=Dorea RepID=A6BFV7_9FIRM
Carbamate kinase {ECO:0000256|PIRNR:PIRNR000723}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
L3_106_000M1_scaffold_828_24
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19960..20589)
DNA (630bp) protein (210aa)
haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E (EC:3.1.3.18)
HAD hydrolase family IA variant 1 n=1 Tax=Dorea longicatena CAG:42 RepID=R7FV45_9FIRM
HAD hydrolase family IA variant 1 {ECO:0000313|EMBL:CDE18695.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
L3_106_000M1_scaffold_828_25
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20570..20722)
DNA (153bp) protein (51aa)
Uncharacterized protein n=1 Tax=Dorea longicatena CAG:42 RepID=R7FYB2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE18692.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
L3_106_000M1_scaffold_828_26
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20677..21810)
DNA (1134bp) protein (378aa)
DNA-binding helix-turn-helix protein n=1 Tax=Dorea longicatena CAG:42 RepID=R7FVK5_9FIRM
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:CDE18691.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
hypothetical protein
L3_106_000M1_scaffold_828_27
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22104..22901
DNA (798bp) protein (266aa)
4-hydroxy-tetrahydrodipicolinate reductase {ECO:0000256|HAMAP-Rule:MF_00102, ECO:0000256|SAAS:SAAS00018068}; Short=HTPA reductase {ECO:0000256|HAMAP-Rule:MF_00102};; EC=1.17.1.8 {ECO:0000256|HAMAP-Rule:MF_00102, ECO:0000256|SAAS:SAAS00018030};; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
4-hydroxy-tetrahydrodipicolinate reductase n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BFW0_9FIRM
Dihydrodipicolinate reductase
L3_106_000M1_scaffold_828_28
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23065..23373)
DNA (309bp) protein (103aa)
Thioredoxin n=2 Tax=Dorea RepID=A6BFW1_9FIRM
Thioredoxin {ECO:0000256|PIRNR:PIRNR000077}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
thioredoxin
L3_106_000M1_scaffold_828_29
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23480..24373)
DNA (894bp) protein (298aa)
Aldose 1-epimerase n=1 Tax=Dorea longicatena CAG:42 RepID=R7FV34_9FIRM
Aldose 1-epimerase {ECO:0000313|EMBL:CDE18685.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
Galactose mutarotase and related enzymes
L3_106_000M1_scaffold_828_30
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24408..24965)
DNA (558bp) protein (186aa)
Hydrolase, NUDIX family n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BFW3_9FIRM
Hydrolase, NUDIX family {ECO:0000313|EMBL:EDM63519.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
Isopentenyldiphosphate isomerase
Displaying items 1-30 of 68 in total

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