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L3_106_000M1_scaffold_1157

Search features with annotation key words

Displaying items 1-30 of 67 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_106_000M1_scaffold_1157_1
unknown

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229..402
DNA (174bp) protein (58aa)

This feature has no annotations

L3_106_000M1_scaffold_1157_2
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(786..2396)
DNA (1611bp) protein (537aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=I8UPW2_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY16245.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
Amino acid transporters
L3_106_000M1_scaffold_1157_3
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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2517..3218
DNA (702bp) protein (234aa)
Ion channel n=3 Tax=Bacteroides RepID=A5ZBP8_9BACE
Ion channel {ECO:0000313|EMBL:EDM21917.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
Ion channel.
L3_106_000M1_scaffold_1157_4
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3326..4333)
DNA (1008bp) protein (336aa)
Glutaminase {ECO:0000256|HAMAP-Rule:MF_00313, ECO:0000256|SAAS:SAAS00041476}; EC=3.5.1.2 {ECO:0000256|HAMAP-Rule:MF_00313, ECO:0000256|SAAS:SAAS00041476};; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
L-glutaminase (EC:3.5.1.2)
Glutaminase n=3 Tax=Bacteroides RepID=A5ZBP9_9BACE
L3_106_000M1_scaffold_1157_5
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4302..5744)
DNA (1443bp) protein (481aa)
Glutamate decarboxylase {ECO:0000256|RuleBase:RU361171}; EC=4.1.1.15 {ECO:0000256|RuleBase:RU361171};; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
Glutamate decarboxylase n=1 Tax=Bacteroides caccae CAG:21 RepID=R5UFX5_9BACE
glutamate decarboxylase
L3_106_000M1_scaffold_1157_6
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6085..6588)
DNA (504bp) protein (168aa)
Sigma-70 region 2 n=3 Tax=Bacteroides caccae RepID=A5ZBQ1_9BACE
Sigma-70 region 2 {ECO:0000313|EMBL:EDM21920.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
RNA polymerase ECF-type sigma factor
L3_106_000M1_scaffold_1157_7
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6700..6810)
DNA (111bp) protein (37aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=A5ZBQ2_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ74389.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
L3_106_000M1_scaffold_1157_8
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6910..8139
DNA (1230bp) protein (410aa)
Transporter, major facilitator family protein n=2 Tax=Bacteroides RepID=A5ZBQ3_9BACE
Transporter, major facilitator family protein {ECO:0000313|EMBL:EDM21922.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
sugar transporter
L3_106_000M1_scaffold_1157_9
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8142..9062
DNA (921bp) protein (307aa)
Uncharacterized protein n=2 Tax=Bacteroides caccae RepID=I9PJ44_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY16253.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
permease
L3_106_000M1_scaffold_1157_10
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9139..9531)
DNA (393bp) protein (131aa)
Histidine triad domain protein n=3 Tax=Bacteroides RepID=A5ZBQ5_9BACE
Histidine triad domain protein {ECO:0000313|EMBL:EDM21924.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases
L3_106_000M1_scaffold_1157_11
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9583..10113)
DNA (531bp) protein (177aa)
Transcription elongation factor GreA n=3 Tax=Bacteroides RepID=A5ZBQ6_9BACE
Transcription elongation factor GreA {ECO:0000256|HAMAP-Rule:MF_00105, ECO:0000256|SAAS:SAAS00018706}; Transcript cleavage factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
transcription elongation factor GreA
L3_106_000M1_scaffold_1157_12
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10229..11380)
DNA (1152bp) protein (384aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CAG:21 RepID=R5UFD9_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ74394.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
AhpC/TSA family.
L3_106_000M1_scaffold_1157_13
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11577..13703
DNA (2127bp) protein (709aa)
Polyribonucleotide nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_01595}; EC=2.7.7.8 {ECO:0000256|HAMAP-Rule:MF_01595};; Polynucleotide phosphorylase {ECO:0000256|HAMAP-Rule:MF_01595}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
polyribonucleotide nucleotidyltransferase (EC:2.7.7.8)
Polyribonucleotide nucleotidyltransferase n=3 Tax=Bacteroides RepID=A5ZBQ8_9BACE
L3_106_000M1_scaffold_1157_14
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13807..13986)
DNA (180bp) protein (60aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I9PJ49_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY16258.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
L3_106_000M1_scaffold_1157_15
unknown

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comp(14511..14681)
DNA (171bp) protein (57aa)

This feature has no annotations

L3_106_000M1_scaffold_1157_16
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15751..16812)
DNA (1062bp) protein (354aa)
Probable butyrate kinase {ECO:0000256|HAMAP-Rule:MF_00542}; Short=BK {ECO:0000256|HAMAP-Rule:MF_00542};; EC=2.7.2.7 {ECO:0000256|HAMAP-Rule:MF_00542};; Branched-chain carboxylic acid kinase {ECO:0000256|HAMAP-Rule:MF_00542}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
butyrate kinase (EC:2.7.2.7)
Probable butyrate kinase n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I9E8W6_9BACE
L3_106_000M1_scaffold_1157_17
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16830..17786)
DNA (957bp) protein (319aa)
Phosphate butyryltransferase {ECO:0000313|EMBL:EDM21933.1}; EC=2.3.1.19 {ECO:0000313|EMBL:EDM21933.1};; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
phosphate butyryltransferase (EC:2.3.1.8 2.3.1.19)
Phosphate butyryltransferase n=3 Tax=Bacteroides RepID=A5ZBR4_9BACE
L3_106_000M1_scaffold_1157_18
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17966..18769
DNA (804bp) protein (268aa)
Glycosyl hydrolase family 16 n=2 Tax=Bacteroides caccae RepID=A5ZBR5_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY16261.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
beta-glucanase
L3_106_000M1_scaffold_1157_19
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18778..19686
DNA (909bp) protein (303aa)
Uncharacterized proteins, homologs of microcin C7 resistance protein MccF (EC:3.4.17.13)
LD-carboxypeptidase n=2 Tax=Bacteroides RepID=A5ZBR6_9BACE
LD-carboxypeptidase {ECO:0000313|EMBL:EDM21935.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
L3_106_000M1_scaffold_1157_20
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19715..20740
DNA (1026bp) protein (342aa)
Peptidase, M28 family {ECO:0000313|EMBL:EDM21936.1}; EC=3.4.-.- {ECO:0000313|EMBL:EDM21936.1};; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
Peptidase, M28 family n=2 Tax=Bacteroides caccae RepID=A5ZBR7_9BACE
Predicted aminopeptidases
L3_106_000M1_scaffold_1157_21
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20791..21216
DNA (426bp) protein (142aa)
Fe-S metabolism associated domain protein n=3 Tax=Bacteroides RepID=A5ZBR8_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY16264.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
Cysteine desulfuration protein SufE
L3_106_000M1_scaffold_1157_22
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21464..24520
DNA (3057bp) protein (1019aa)
TonB-linked outer membrane protein, SusC/RagA family n=2 Tax=Bacteroides RepID=A5ZBR9_9BACE
TonB-linked outer membrane protein SusC/RagA family {ECO:0000313|EMBL:CCZ74404.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
hypothetical protein
L3_106_000M1_scaffold_1157_23
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24533..25924
DNA (1392bp) protein (464aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I9PIQ7_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY16266.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
hypothetical protein
L3_106_000M1_scaffold_1157_24
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25953..27164
DNA (1212bp) protein (404aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=A5ZBS2_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ74406.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
putative lipoprotein
L3_106_000M1_scaffold_1157_25
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27189..30035
DNA (2847bp) protein (949aa)
Peptidase M16 inactive domain protein n=3 Tax=root RepID=A5ZBS3_9BACE
Peptidase M16 inactive domain protein {ECO:0000313|EMBL:CCZ74407.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
putative peptidase
L3_106_000M1_scaffold_1157_26
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30028..30915
DNA (888bp) protein (296aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=A5ZBS4_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ74408.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
hypothetical protein
L3_106_000M1_scaffold_1157_27
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30905..31678)
DNA (774bp) protein (258aa)
CAAX amino terminal protease family protein n=2 Tax=Bacteroides caccae RepID=A5ZBS5_9BACE
CAAX amino terminal protease family protein {ECO:0000313|EMBL:EDM21944.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
CAAX amino terminal protease family.
L3_106_000M1_scaffold_1157_28
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(31690..31779)
DNA (90bp) protein (30aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=I9PIS3_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ74410.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
L3_106_000M1_scaffold_1157_29
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(31815..32801)
DNA (987bp) protein (329aa)
Riboflavin biosynthesis protein {ECO:0000256|PIRNR:PIRNR004491}; EC=2.7.1.26 {ECO:0000256|PIRNR:PIRNR004491};; EC=2.7.7.2 {ECO:0000256|PIRNR:PIRNR004491};; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
Riboflavin biosynthesis protein RibF n=2 Tax=Bacteroides caccae RepID=A5ZBS6_9BACE
riboflavin biosynthesis protein RibF
L3_106_000M1_scaffold_1157_30
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(32812..33435)
DNA (624bp) protein (208aa)
HAD hydrolase, family IA, variant 3 n=3 Tax=Bacteroides RepID=A5ZBS7_9BACE
HAD hydrolase, family IA, variant 3 {ECO:0000313|EMBL:EDM21946.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
Displaying items 1-30 of 67 in total

View Taxonomy