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L3_106_000M1_scaffold_1678

Search features with annotation key words

Displaying items 1-30 of 72 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_106_000M1_scaffold_1678_1
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2..352
DNA (351bp) protein (117aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B3Q9_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EDN77585.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
uncharacterized protein
L3_106_000M1_scaffold_1678_2
unknown

Not on your lists

349..576
DNA (228bp) protein (76aa)

This feature has no annotations

L3_106_000M1_scaffold_1678_3
unknown

Not on your lists

578..910
DNA (333bp) protein (111aa)

This feature has no annotations

L3_106_000M1_scaffold_1678_4
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

910..1644
DNA (735bp) protein (245aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme 90A7 RepID=N9Z801_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ16599.1}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
hypothetical protein
L3_106_000M1_scaffold_1678_5
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1641..2186
DNA (546bp) protein (182aa)
Uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PAM5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS11205.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
L3_106_000M1_scaffold_1678_6
unknown

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2170..2496
DNA (327bp) protein (109aa)

This feature has no annotations

L3_106_000M1_scaffold_1678_7
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2500..2964
DNA (465bp) protein (155aa)
Single-stranded DNA-binding protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PJS6_9FIRM
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|PIRNR:PIRNR002070}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
single-strand binding protein
L3_106_000M1_scaffold_1678_8
Haemophilus influenzae, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2977..3198
DNA (222bp) protein (74aa)
Uncharacterized protein n=1 Tax=Haemophilus influenzae F3031 RepID=E7A8L6_HAEIF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBY80599.1}; TaxID=866630 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus influenzae F3031.;"
L3_106_000M1_scaffold_1678_9
[Eubacterium] dolichum, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

3220..3999
DNA (780bp) protein (260aa)
UPI00030404C6 related cluster n=1 Tax=unknown RepID=UPI00030404C6
Uncharacterized protein {ECO:0000313|EMBL:EDP10913.1}; TaxID=428127 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="[Eubacterium] dolichum DSM 3991.;"
hypothetical protein
L3_106_000M1_scaffold_1678_10
unknown

Not on your lists

3992..4351
DNA (360bp) protein (120aa)

This feature has no annotations

L3_106_000M1_scaffold_1678_11
unknown

Not on your lists

4338..4526
DNA (189bp) protein (63aa)

This feature has no annotations

L3_106_000M1_scaffold_1678_12
Lachnospiraceae bacterium A2, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4523..5179
DNA (657bp) protein (219aa)
hypothetical protein n=1 Tax=Lachnospiraceae bacterium A2 RepID=UPI0003B45C94
Uncharacterized protein {ECO:0000313|EMBL:EOS47171.1}; TaxID=397290 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium A2.;"
hypothetical protein
L3_106_000M1_scaffold_1678_13
Anaerococcus hydrogenalis, Anaerococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5176..5574
DNA (399bp) protein (133aa)
Crossover junction endodeoxyribonuclease RusA {ECO:0000313|EMBL:EGC83665.1}; EC=3.1.22.4 {ECO:0000313|EMBL:EGC83665.1};; TaxID=879306 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Anaerococcus.;" source="Anaerococcus hydrogenalis ACS-025-V-Sch4.;"
crossover junction endodeoxyribonuclease RusA n=1 Tax=Peptoniphilus lacrimalis RepID=UPI0003616DEF
endodeoxyribonuclease RusA
L3_106_000M1_scaffold_1678_14
unknown

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5558..5764
DNA (207bp) protein (69aa)

This feature has no annotations

L3_106_000M1_scaffold_1678_15
unknown

Not on your lists

5770..6099
DNA (330bp) protein (110aa)

This feature has no annotations

L3_106_000M1_scaffold_1678_16
unknown

Not on your lists

6096..6383
DNA (288bp) protein (96aa)

This feature has no annotations

L3_106_000M1_scaffold_1678_17
unknown

Not on your lists

6383..6718
DNA (336bp) protein (112aa)

This feature has no annotations

L3_106_000M1_scaffold_1678_18
unknown

Not on your lists

6730..7083
DNA (354bp) protein (118aa)

This feature has no annotations

L3_106_000M1_scaffold_1678_19
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7076..7663
DNA (588bp) protein (196aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6U7B8_9FIRM
hypothetical protein predicted by Glimmer/Critica
Uncharacterized protein {ECO:0000313|EMBL:CCO05293.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L3_106_000M1_scaffold_1678_20
[Clostridium] sticklandii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7720..8085
DNA (366bp) protein (122aa)
Gp26 n=1 Tax=Clostridium sticklandii (strain ATCC 12662 / DSM 519 / JCM 1433 / NCIB 10654) RepID=E3PS12_CLOSD
Gp26
Gp26 {ECO:0000313|EMBL:CBH21666.1}; TaxID=499177 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sticklandii (strain ATCC 12662 / DSM 519 / JCM 1433 / NCIB; 10654).;"
L3_106_000M1_scaffold_1678_21
unknown

Not on your lists

8072..8359
DNA (288bp) protein (96aa)

This feature has no annotations

L3_106_000M1_scaffold_1678_22
unknown

Not on your lists

8366..8566
DNA (201bp) protein (67aa)

This feature has no annotations

L3_106_000M1_scaffold_1678_23
unknown

Not on your lists

8563..8712
DNA (150bp) protein (50aa)

This feature has no annotations

L3_106_000M1_scaffold_1678_24
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8684..9073
DNA (390bp) protein (130aa)
Putative uncharacterized protein n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R5F7_CLOSW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADL03363.1}; TaxID=610130 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533; / WM1).;"
L3_106_000M1_scaffold_1678_25
Prevotella histicola, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9881..11026
DNA (1146bp) protein (382aa)
DNA adenine methyltransferase, phage-associated n=2 Tax=Lactobacillus paracasei subsp. tolerans RepID=S2LC93_LACPA
Uncharacterized protein {ECO:0000313|EMBL:KGF29916.1}; TaxID=1236504 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella histicola JCM 15637 = DNF00424.;"
L3_106_000M1_scaffold_1678_26
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11098..11475
DNA (378bp) protein (126aa)
Uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PAN8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS11218.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
hypothetical protein
L3_106_000M1_scaffold_1678_27
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11456..12739
DNA (1284bp) protein (428aa)
PBSX family phage terminase large subunit n=1 Tax=Clostridium leptum CAG:27 RepID=R6P8C3_9CLOT
PBSX family phage terminase large subunit {ECO:0000313|EMBL:CDC06137.1}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
prophage LambdaCh01, PBSX family terminase large subunit
L3_106_000M1_scaffold_1678_28
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

12756..14102
DNA (1347bp) protein (449aa)
Putative phage portal protein, SPP1 family n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E793_9ACTN
Putative phage portal protein, SPP1 family {ECO:0000313|EMBL:EBA40602.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
SPP1 family phage portal protein
L3_106_000M1_scaffold_1678_29
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

Not on your lists

14107..14412
DNA (306bp) protein (102aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme CM201 RepID=N9XAS5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY21860.1}; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
hypothetical protein
L3_106_000M1_scaffold_1678_30
unknown

Not on your lists

14723..15082
DNA (360bp) protein (120aa)

This feature has no annotations

Displaying items 1-30 of 72 in total

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