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L3_106_000M1_scaffold_4687

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_106_000M1_scaffold_4687_1
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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1..1116
DNA (1116bp) protein (372aa)
Uncharacterized protein n=1 Tax=Bacteroides vulgatus dnLKV7 RepID=R9HI18_BACVU
Viral (Super1) RNA helicase family protein {ECO:0000313|EMBL:KDS56523.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
helicase
L3_106_000M1_scaffold_4687_2
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(1300..1674)
DNA (375bp) protein (125aa)
Uncharacterized protein n=7 Tax=Bacteroides RepID=A6L1R5_BACV8
Thioesterase superfamily protein {ECO:0000313|EMBL:KDS29609.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
hypothetical protein
L3_106_000M1_scaffold_4687_3
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(1906..2772)
DNA (867bp) protein (289aa)
Uncharacterized protein n=1 Tax=Bacteroides vulgatus CAG:6 RepID=R7NW34_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDF16940.1}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
hypothetical protein
L3_106_000M1_scaffold_4687_4
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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3046..4938
DNA (1893bp) protein (631aa)
DNA topoisomerase III family protein {ECO:0000313|EMBL:KDS29611.1}; EC=5.99.1.2 {ECO:0000313|EMBL:KDS29611.1};; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
DNA topoisomerase III n=1 Tax=Bacteroides vulgatus CAG:6 RepID=R7NWB0_9BACE
DNA topoisomerase
L3_106_000M1_scaffold_4687_5
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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4889..5104
DNA (216bp) protein (72aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. 4_3_47FAA RepID=G1UM60_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EGX27666.1}; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
L3_106_000M1_scaffold_4687_6
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(5075..6502)
DNA (1428bp) protein (476aa)
NOL1/NOP2/sun family protein n=1 Tax=Bacteroides vulgatus PC510 RepID=D4VCF2_BACVU
NOL1/NOP2/sun family protein {ECO:0000313|EMBL:EFG16465.1}; TaxID=702446 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus PC510.;"
tRNA and rRNA cytosine-C5-methylase
L3_106_000M1_scaffold_4687_7
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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6634..7341
DNA (708bp) protein (236aa)
Putative uncharacterized protein n=1 Tax=Bacteroides vulgatus PC510 RepID=D4VCF1_BACVU
Putative uncharacterized protein {ECO:0000313|EMBL:EFG16464.1}; TaxID=702446 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus PC510.;"
hypothetical protein
L3_106_000M1_scaffold_4687_8
Bacteroides dorei, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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7344..7892
DNA (549bp) protein (183aa)
RNA polymerase sigma factor n=14 Tax=Bacteroides RepID=A6L1R0_BACV8
RNA polymerase sigma70 factor
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=357276 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides dorei.;"
L3_106_000M1_scaffold_4687_9
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7876..8205
DNA (330bp) protein (110aa)
Uncharacterized protein n=5 Tax=Bacteroides RepID=A6L1Q9_BACV8
Uncharacterized protein {ECO:0000313|EMBL:KDS56530.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
hypothetical protein
L3_106_000M1_scaffold_4687_10
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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8287..9081
DNA (795bp) protein (265aa)
Thymidylate synthase {ECO:0000256|HAMAP-Rule:MF_00008, ECO:0000256|SAAS:SAAS00215270}; Short=TS {ECO:0000256|HAMAP-Rule:MF_00008};; Short=TSase {ECO:0000256|HAMAP-Rule:MF_00008};; EC=2.1.1.45 {ECO:0000256|HAMAP-Rule:MF_00008, ECO:0000256|SAAS:SAAS00215290};; TaxID=702446 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus PC510.;"
thyA; thymidylate synthase (EC:2.1.1.45)
Thymidylate synthase n=4 Tax=Bacteroides RepID=D4VCE8_BACVU
L3_106_000M1_scaffold_4687_11
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9165..9662
DNA (498bp) protein (166aa)
Dihydrofolate reductase {ECO:0000256|PIRNR:PIRNR000194}; EC=1.5.1.3 {ECO:0000256|PIRNR:PIRNR000194};; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
Dihydrofolate reductase n=5 Tax=Bacteroides RepID=A6L1Q7_BACV8
dihydrofolate reductase
L3_106_000M1_scaffold_4687_12
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(9666..10142)
DNA (477bp) protein (159aa)
Transcriptional regulator n=7 Tax=Bacteroides RepID=A6L1Q6_BACV8
transcriptional regulator
Transcriptional regulator AsnC family {ECO:0000313|EMBL:CDF16948.1}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
L3_106_000M1_scaffold_4687_13
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10171..11556
DNA (1386bp) protein (462aa)
IgA Peptidase M64 n=6 Tax=Bacteroides RepID=C6Z4K7_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EOS03590.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
peptidase M64
L3_106_000M1_scaffold_4687_14
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11591..12127
DNA (537bp) protein (179aa)
Uncharacterized protein n=4 Tax=Bacteroides vulgatus RepID=A6L1Q4_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIY81476.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
L3_106_000M1_scaffold_4687_15
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12038..12253)
DNA (216bp) protein (72aa)
Uncharacterized protein n=1 Tax=Bacteroides vulgatus CAG:6 RepID=R7NWB9_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDF16951.1}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
L3_106_000M1_scaffold_4687_16
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12309..12773)
DNA (465bp) protein (155aa)
Uncharacterized protein n=7 Tax=Bacteroides RepID=A6L1Q3_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIY81478.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
L3_106_000M1_scaffold_4687_17
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12773..13363)
DNA (591bp) protein (197aa)
Uncharacterized protein n=7 Tax=Bacteroides RepID=A6L1Q2_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDF16953.1}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
L3_106_000M1_scaffold_4687_18
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13407..13868)
DNA (462bp) protein (154aa)
Uncharacterized protein n=7 Tax=Bacteroides RepID=A6L1Q1_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EOS03596.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L3_106_000M1_scaffold_4687_19
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13876..14649)
DNA (774bp) protein (258aa)
Transporter, MotA/TolQ/ExbB proton channel family protein n=7 Tax=Bacteroides RepID=C6Z4L2_9BACE
biopolymer transport protein
Putative biopolymer transport protein {ECO:0000313|EMBL:CDF16955.1}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
L3_106_000M1_scaffold_4687_20
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14992..15765)
DNA (774bp) protein (258aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=R7NWC3_9BACE
TatD family hydrolase {ECO:0000313|EMBL:EOS03598.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
hypothetical protein
L3_106_000M1_scaffold_4687_21
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15767..16744)
DNA (978bp) protein (326aa)
Isoprenoid biosynthesis like protein n=1 Tax=Bacteroides vulgatus CAG:6 RepID=R7NXV3_9BACE
Isoprenoid biosynthesis like protein {ECO:0000313|EMBL:CDF16957.1}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
isoprenoid biosynthesis-like protein
L3_106_000M1_scaffold_4687_22
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16826..17509)
DNA (684bp) protein (228aa)
Outer membrane protein TonB n=7 Tax=Bacteroides RepID=A6L1P7_BACV8
outer membrane protein TonB
TonB family domain-containing protein {ECO:0000313|EMBL:EIY81484.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
Displaying 22 items

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