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L3_106_000M1_scaffold_4905

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_106_000M1_scaffold_4905_1
Bacteroides sp. 3_1_33FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(3..329)
DNA (327bp) protein (109aa)
Bifunctional protein FolD n=7 Tax=Bacteroides RepID=FOLD_BACV8
bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/5,10-methylene-tetrahydrofolate cyclohydrolase
Bifunctional protein FolD {ECO:0000256|HAMAP-Rule:MF_01576}; TaxID=457391 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_33FAA.;"
L3_106_000M1_scaffold_4905_2
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(443..1765)
DNA (1323bp) protein (441aa)
Signal recognition particle protein n=7 Tax=Bacteroides RepID=A6L2G1_BACV8
signal recognition protein
Signal recognition particle protein {ECO:0000256|HAMAP-Rule:MF_00306}; Fifty-four homolog {ECO:0000256|HAMAP-Rule:MF_00306}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
L3_106_000M1_scaffold_4905_3
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(1864..3186)
DNA (1323bp) protein (441aa)
MATE efflux family protein n=1 Tax=Bacteroides vulgatus CL09T03C04 RepID=I9UIJ6_BACVU
MATE efflux family protein {ECO:0000313|EMBL:EIY82098.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
antiporter membrane protein
L3_106_000M1_scaffold_4905_4
Bacteroides sp. 3_1_40A, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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3358..4023
DNA (666bp) protein (222aa)
Outer membrane protein transport protein, Ompp1/FadL/TodX family n=2 Tax=Bacteroides RepID=C6Z5T3_9BACE
Outer membrane protein {ECO:0000313|EMBL:EFV67466.1}; TaxID=469593 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_40A.;"
outer membrane protein
L3_106_000M1_scaffold_4905_5
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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4040..4345
DNA (306bp) protein (102aa)
Outer membrane protein transport protein, Ompp1/FadL/TodX family n=2 Tax=Bacteroides RepID=C6Z5T3_9BACE
membrane protein
Outer membrane protein transport protein, Ompp1/FadL/TodX family {ECO:0000313|EMBL:EET16242.1}; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
L3_106_000M1_scaffold_4905_6
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(4404..4964)
DNA (561bp) protein (187aa)
RNA polymerase sigma-70 factor n=7 Tax=Bacteroides RepID=C6Z5T2_9BACE
RNA polymerase ECF-type sigma factor
RNA polymerase sigma-70 factor, expansion family 1 {ECO:0000313|EMBL:EOS06200.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L3_106_000M1_scaffold_4905_7
Bacteroides sp. 3_1_40A, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(4989..6080)
DNA (1092bp) protein (364aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=C6Z5T1_9BACE
Transmembrane protein {ECO:0000313|EMBL:EFV67464.1}; TaxID=469593 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_40A.;"
transmembrane protein
L3_106_000M1_scaffold_4905_8
Bacteroides sp. 3_1_40A, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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6281..8704
DNA (2424bp) protein (808aa)
Glycoside hydrolase family 20, candidate beta-N-acetylhexosaminidase n=4 Tax=root RepID=A6L2F6_BACV8
Glycoside hydrolase family 20 {ECO:0000313|EMBL:EFV67463.1}; TaxID=469593 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_40A.;"
beta-N-acetylhexosaminidase
L3_106_000M1_scaffold_4905_9
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8938..9768
DNA (831bp) protein (277aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=I9UIK1_BACVU
Carboxymuconolactone decarboxylase family protein {ECO:0000313|EMBL:KDS55806.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
hypothetical protein
L3_106_000M1_scaffold_4905_10
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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9903..11117
DNA (1215bp) protein (405aa)
Uncharacterized protein n=2 Tax=Bacteroides vulgatus RepID=I9J6I0_BACVU
outer membrane protein
Uncharacterized protein {ECO:0000313|EMBL:EIY82104.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
L3_106_000M1_scaffold_4905_11
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(11192..12442)
DNA (1251bp) protein (417aa)
pgk; phosphoglycerate kinase (EC:2.7.2.3)
Phosphoglycerate kinase {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532}; EC=2.7.2.3 {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532};; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
Phosphoglycerate kinase n=7 Tax=Bacteroides RepID=A6L2F3_BACV8
L3_106_000M1_scaffold_4905_12
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12589..13596
DNA (1008bp) protein (336aa)
Sigma factor regulatory protein, FecR/PupR family n=5 Tax=Bacteroides RepID=D4V3W3_BACVU
Sigma factor regulatory protein, FecR/PupR family {ECO:0000313|EMBL:EFG19460.1}; TaxID=702446 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus PC510.;"
anti-sigma factor
L3_106_000M1_scaffold_4905_13
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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13817..16546
DNA (2730bp) protein (910aa)
TonB-linked outer membrane protein, SusC/RagA family n=3 Tax=Bacteroides RepID=C6Z5S5_9BACE
SusC/RagA family TonB-linked outer membrane protein {ECO:0000313|EMBL:EOS06193.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
hypothetical protein
Displaying 13 items

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