ggKbase home page

L3_106_000M1_scaffold_8549

Search features with annotation key words

Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_106_000M1_scaffold_8549_1
Bacteroides sp. D1, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

116..778
DNA (663bp) protein (221aa)
Uncharacterized protein n=4 Tax=Bacteroides RepID=C3QKG2_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EEO52446.1}; TaxID=556258 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D1.;"
hypothetical protein
L3_106_000M1_scaffold_8549_2
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

791..1465
DNA (675bp) protein (225aa)
Ribosomal RNA small subunit methyltransferase I {ECO:0000256|HAMAP-Rule:MF_01877}; EC=2.1.1.198 {ECO:0000256|HAMAP-Rule:MF_01877};; 16S rRNA 2'-O-ribose C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01877}; rRNA (cytidine-2'-O-)-methyltransferase RsmI {ECO:0000256|HAMAP-Rule:MF_01877}; TaxID=1339346 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus str. 3725 D1 iv.;"
Ribosomal RNA small subunit methyltransferase I n=14 Tax=Bacteroides RepID=D6D852_9BACE
conserved hypothetical protein TIGR00096
L3_106_000M1_scaffold_8549_3
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1499..2356
DNA (858bp) protein (286aa)
Uncharacterized protein n=7 Tax=Bacteroides RepID=A7LYZ9_BACOV
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDO11171.1}; TaxID=411476 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus (strain ATCC 8483 / DSM 1896 / JCM 5824 / NCTC; 11153).;"
L3_106_000M1_scaffold_8549_4
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2454..3146
DNA (693bp) protein (231aa)
HAD superfamily (Subfamily IA) hydrolase, TIGR02254 n=4 Tax=Bacteroides RepID=D6D854_9BACE
HAD superfamily (subfamily IA) hydrolase, TIGR02254
TIGR02254 family HAD hydrolase {ECO:0000313|EMBL:EIY55441.1}; TaxID=997885 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL02T12C04.;"
L3_106_000M1_scaffold_8549_5
Bacteroides sp. 1_1_30, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3208..3858
DNA (651bp) protein (217aa)
MarC family membrane protein n=5 Tax=Bacteroides RepID=I8XX08_BACOV
conserved hypothetical protein TIGR00427
UPF0056 membrane protein {ECO:0000256|RuleBase:RU362048}; TaxID=457387 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_30.;"
L3_106_000M1_scaffold_8549_6
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4194..4415
DNA (222bp) protein (74aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=I9AAS7_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY55439.1}; TaxID=997885 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL02T12C04.;"
L3_106_000M1_scaffold_8549_7
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4486..5898)
DNA (1413bp) protein (471aa)
SusD family protein n=6 Tax=Bacteroides RepID=A7LZ03_BACOV
Putative lipoprotein {ECO:0000313|EMBL:EFF53494.1}; TaxID=702443 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus SD CMC 3f.;"
SusD family.
L3_106_000M1_scaffold_8549_8
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5918..6541)
DNA (624bp) protein (208aa)
SusC/RagA family TonB-linked outer membrane protein n=2 Tax=Bacteroides ovatus CL03T12C18 RepID=I9HNW6_BACOV
SusC/RagA family TonB-linked outer membrane protein {ECO:0000313|EMBL:EIY55437.1}; Flags: Fragment;; TaxID=997885 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL02T12C04.;"
TonB-dependent receptor plug
Displaying 8 items

View Taxonomy