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L3_106_000M1_scaffold_3784

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Displaying items 1-30 of 63 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_106_000M1_scaffold_3784_1
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(1..87)
DNA (87bp) protein (29aa)
Uncharacterized protein n=1 Tax=Bacteroides vulgatus CL09T03C04 RepID=I9U4S1_BACVU
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:KDS31628.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
L3_106_000M1_scaffold_3784_2
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(164..742)
DNA (579bp) protein (193aa)
Uncharacterized protein n=3 Tax=Bacteroides vulgatus RepID=A6L7R8_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EOS04270.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L3_106_000M1_scaffold_3784_3
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(755..1228)
DNA (474bp) protein (158aa)
Sigma-70 region 2 n=4 Tax=Bacteroides RepID=D4V4K6_BACVU
RNA polymerase ECF-type sigma factor
Putative RNA polymerase ECF-type sigma factor {ECO:0000313|EMBL:CDF17746.1}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
L3_106_000M1_scaffold_3784_4
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1337..1978)
DNA (642bp) protein (214aa)
Uncharacterized protein n=3 Tax=Bacteroides vulgatus RepID=A6L7R6_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EOS04268.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L3_106_000M1_scaffold_3784_5
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2461..3087
DNA (627bp) protein (209aa)
Putative DNA-binding protein n=2 Tax=Bacteroides RepID=D4V4K8_BACVU
Uncharacterized protein {ECO:0000313|EMBL:EOS04267.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
hypothetical protein
L3_106_000M1_scaffold_3784_6
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3302..4669)
DNA (1368bp) protein (456aa)
Outer membrane protein n=6 Tax=Bacteroides RepID=E5UWP7_9BACE
outer membrane protein
Uncharacterized protein {ECO:0000313|EMBL:EOS04266.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L3_106_000M1_scaffold_3784_7
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4714..7839)
DNA (3126bp) protein (1042aa)
AcrB/D/F family transporter n=1 Tax=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154) RepID=A6L7R3_BACV8
AcrB/AcrD/AcrF family transporter
AcrB/D/F family transporter {ECO:0000313|EMBL:ABR41727.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
L3_106_000M1_scaffold_3784_8
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7839..8906)
DNA (1068bp) protein (356aa)
Efflux transporter, RND family, MFP subunit n=2 Tax=Bacteroides vulgatus RepID=R9HK12_BACVU
lipoprotein
Putative lipoprotein {ECO:0000313|EMBL:ABR41726.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
L3_106_000M1_scaffold_3784_9
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9083..9961
DNA (879bp) protein (293aa)
Transcriptional regulator n=4 Tax=Bacteroides RepID=A6L7R1_BACV8
transcriptional regulator
Transcriptional regulator, AraC family {ECO:0000313|EMBL:EET14602.2}; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
L3_106_000M1_scaffold_3784_10
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10027..10791
DNA (765bp) protein (255aa)
Uncharacterized protein n=3 Tax=Bacteroides vulgatus RepID=A6L7R0_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EOS04262.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L3_106_000M1_scaffold_3784_11
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10967..12955)
DNA (1989bp) protein (663aa)
Glucosamine-6-phosphate deaminase {ECO:0000256|SAAS:SAAS00029492}; EC=3.5.99.6 {ECO:0000256|SAAS:SAAS00029496};; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
glucosamine-6-phosphate deaminase (EC:3.5.99.6)
Glucosamine-6-phosphate deaminase-like protein n=3 Tax=Bacteroides vulgatus RepID=D4V4L4_BACVU
L3_106_000M1_scaffold_3784_12
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12959..13750)
DNA (792bp) protein (264aa)
nagB; glucosamine-6-phosphate deaminase (EC:3.5.99.6)
Glucosamine-6-phosphate deaminase {ECO:0000256|HAMAP-Rule:MF_01241, ECO:0000256|SAAS:SAAS00029492}; EC=3.5.99.6 {ECO:0000256|HAMAP-Rule:MF_01241, ECO:0000256|SAAS:SAAS00029496};; GlcN6P deaminase {ECO:0000256|HAMAP-Rule:MF_01241}; Glucosamine-6-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_01241}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
Glucosamine-6-phosphate deaminase n=7 Tax=Bacteroides RepID=NAGB_BACV8
L3_106_000M1_scaffold_3784_13
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13796..15031)
DNA (1236bp) protein (412aa)
Major facilitator family transporter n=7 Tax=Bacteroides RepID=A6L7Q7_BACV8
major facilitator family transporter
Major Facilitator Superfamily protein {ECO:0000313|EMBL:KDS56358.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
L3_106_000M1_scaffold_3784_14
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15050..16246)
DNA (1197bp) protein (399aa)
Renin-binding protein-related protein n=2 Tax=Bacteroides vulgatus RepID=A6L7Q6_BACV8
renin-binding protein-related protein
Renin-binding protein-related protein {ECO:0000313|EMBL:ABR41720.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
L3_106_000M1_scaffold_3784_15
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16259..17173)
DNA (915bp) protein (305aa)
Dihydrodipicolinate synthetase family n=10 Tax=Bacteroides RepID=C3PVP0_9BACE
N-acetylneuraminate lyase
Dihydrodipicolinate synthetase family protein {ECO:0000313|EMBL:KDS31643.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
L3_106_000M1_scaffold_3784_16
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17479..18438
DNA (960bp) protein (320aa)
ROK family protein n=13 Tax=Bacteroides RepID=C3R7S4_9BACE
xylose repressor
Uncharacterized protein {ECO:0000313|EMBL:EIY76893.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
L3_106_000M1_scaffold_3784_17
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18501..18941
DNA (441bp) protein (147aa)
RNA polymerase ECF-type sigma factor n=4 Tax=Bacteroides RepID=A6L7Q3_BACV8
RNA polymerase sigma 70
RNA polymerase ECF-type sigma factor {ECO:0000313|EMBL:ABR41717.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
L3_106_000M1_scaffold_3784_18
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19154..20236
DNA (1083bp) protein (361aa)
Sigma factor regulatory protein, FecR/PupR family n=4 Tax=Bacteroides RepID=D4V4M1_BACVU
anti-sigma factor
Putative anti-sigma factor {ECO:0000313|EMBL:ABR41716.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
L3_106_000M1_scaffold_3784_19
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20384..24121
DNA (3738bp) protein (1246aa)
Putative outer membrane protein probably involved in nutrient binding n=1 Tax=Bacteroides vulgatus CAG:6 RepID=R7NYH3_9BACE
hypothetical protein
TonB-linked outer membrane , SusC/RagA family protein {ECO:0000313|EMBL:KDS31647.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
L3_106_000M1_scaffold_3784_20
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24137..25726
DNA (1590bp) protein (530aa)
Putative lipoprotein n=1 Tax=Bacteroides vulgatus PC510 RepID=D4V4M3_BACVU
Putative outer membrane protein {ECO:0000313|EMBL:KDS31648.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
hypothetical protein
L3_106_000M1_scaffold_3784_21
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25739..26983
DNA (1245bp) protein (415aa)
Uncharacterized protein n=2 Tax=Bacteroides vulgatus RepID=A6L7P9_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABR41713.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
L3_106_000M1_scaffold_3784_22
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27038..27787)
DNA (750bp) protein (250aa)
HAD hydrolase, family IA, variant 3 n=2 Tax=Bacteroides vulgatus RepID=D4V4M5_BACVU
beta-phosphoglucomutase
Putative beta-phosphoglucomutase {ECO:0000313|EMBL:KDS31650.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
L3_106_000M1_scaffold_3784_23
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27937..29280)
DNA (1344bp) protein (448aa)
Glucose-6-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612}; Short=GPI {ECO:0000256|HAMAP-Rule:MF_00473};; EC=5.3.1.9 {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612};; Phosphoglucose isomerase {ECO:0000256|HAMAP-Rule:MF_00473}; Phosphohexose isomerase {ECO:0000256|HAMAP-Rule:MF_00473}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
pgi; glucose-6-phosphate isomerase (EC:5.3.1.9)
Glucose-6-phosphate isomerase n=1 Tax=Bacteroides vulgatus PC510 RepID=D4V4M6_BACVU
L3_106_000M1_scaffold_3784_24
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29294..30289)
DNA (996bp) protein (332aa)
Glycerol-3-phosphate dehydrogenase {ECO:0000256|RuleBase:RU000439}; EC=1.1.1.94 {ECO:0000256|RuleBase:RU000439};; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
Glycerol-3-phosphate dehydrogenase n=7 Tax=Bacteroides RepID=A6L7P6_BACV8
glycerol-3-phosphate dehydrogenase
L3_106_000M1_scaffold_3784_25
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30346..32076)
DNA (1731bp) protein (577aa)
Lysine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336}; EC=6.1.1.6 {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336};; Lysyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00252}; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
lysS; lysyl-tRNA synthetase (EC:6.1.1.6)
Lysine--tRNA ligase n=5 Tax=root RepID=C6Z154_9BACE
L3_106_000M1_scaffold_3784_26
Bacteroides sp. 3_1_40A, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(32151..32759)
DNA (609bp) protein (203aa)
Uncharacterized protein n=5 Tax=Bacteroides RepID=C6Z155_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EFV66388.1}; TaxID=469593 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_40A.;"
membrane protein
L3_106_000M1_scaffold_3784_27
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

32991..33533
DNA (543bp) protein (181aa)
Redoxin family protein n=4 Tax=Bacteroides RepID=C6Z156_9BACE
Redoxin family protein {ECO:0000313|EMBL:EET14615.1}; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
hypothetical protein
L3_106_000M1_scaffold_3784_28
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(34072..35748)
DNA (1677bp) protein (559aa)
Rne/Rng family ribonuclease n=1 Tax=Bacteroides vulgatus CL09T03C04 RepID=I9U3Y5_BACVU
ribonuclease G
Rne/Rng family ribonuclease {ECO:0000313|EMBL:EIY76901.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
L3_106_000M1_scaffold_3784_29
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

36293..37351
DNA (1059bp) protein (353aa)
A/G-specific adenine glycosylase {ECO:0000313|EMBL:EET14619.1}; EC=3.2.2.- {ECO:0000313|EMBL:EET14619.1};; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
A/G-specific adenine glycosylase n=2 Tax=Bacteroides RepID=C6Z160_9BACE
A/G-specific adenine glycosylase
L3_106_000M1_scaffold_3784_30
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

37366..37833
DNA (468bp) protein (156aa)
Single-stranded DNA-binding protein n=1 Tax=Bacteroides vulgatus CL09T03C04 RepID=I9IT90_BACVU
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|PIRNR:PIRNR002070}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
single-strand binding protein
Displaying items 1-30 of 63 in total

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