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L3_106_000M1_scaffold_3935

Search features with annotation key words

Displaying items 1-30 of 43 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_106_000M1_scaffold_3935_1
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3..2099)
DNA (2097bp) protein (699aa)
Uncharacterized protein n=2 Tax=root RepID=I9J526_BACVU
Uncharacterized protein {ECO:0000313|EMBL:KDS23369.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
hypothetical protein
L3_106_000M1_scaffold_3935_2
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2124..4094)
DNA (1971bp) protein (657aa)
Uncharacterized protein n=1 Tax=Bacteroides vulgatus CL09T03C04 RepID=I9UH27_BACVU
Uncharacterized protein {ECO:0000313|EMBL:KDS23318.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
hypothetical protein
L3_106_000M1_scaffold_3935_3
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4149..5387)
DNA (1239bp) protein (413aa)
Uncharacterized protein n=1 Tax=Bacteroides vulgatus CL09T03C04 RepID=I9A2G1_BACVU
Glycosyl Hydrolase Family 88 family protein {ECO:0000313|EMBL:KDS42624.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
hypothetical protein
L3_106_000M1_scaffold_3935_4
Bacteroides dorei, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5645..6355)
DNA (711bp) protein (237aa)
Uridylate kinase {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197273}; Short=UK {ECO:0000256|HAMAP-Rule:MF_01220};; EC=2.7.4.22 {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197270};; Uridine monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_01220}; TaxID=357276 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides dorei.;"
Uridylate kinase n=13 Tax=Bacteroides RepID=PYRH_BACV8
pyrH; uridylate kinase
L3_106_000M1_scaffold_3935_5
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6394..7719)
DNA (1326bp) protein (442aa)
MATE efflux family protein n=5 Tax=Bacteroides RepID=C6Z4T6_9BACE
MATE efflux family protein {ECO:0000313|EMBL:KDS42622.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
DNA-damage-inducible protein F
L3_106_000M1_scaffold_3935_6
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7878..9317
DNA (1440bp) protein (480aa)
Uncharacterized protein n=1 Tax=Bacteroides vulgatus CL09T03C04 RepID=I9J521_BACVU
Peptidase S41 family protein {ECO:0000313|EMBL:KDS42621.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
peptidase S41
L3_106_000M1_scaffold_3935_7
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9314..10081)
DNA (768bp) protein (256aa)
Biotin-[acetyl-CoA-carboxylase] ligase n=1 Tax=Bacteroides vulgatus CL09T03C04 RepID=I9UH24_BACVU
Biotin-[acetyl-CoA-carboxylase] ligase {ECO:0000313|EMBL:EIY81548.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
biotin-(acetyl-CoA carboxylase) synthetase
L3_106_000M1_scaffold_3935_8
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10065..10421)
DNA (357bp) protein (119aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=I9A2F7_BACVU
Uncharacterized protein {ECO:0000313|EMBL:EIY81547.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
hypothetical protein
L3_106_000M1_scaffold_3935_9
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10439..10804)
DNA (366bp) protein (122aa)
UPF0102 protein BVU_1879 n=8 Tax=Bacteroides RepID=Y1879_BACV8
hypothetical protein
UPF0102 protein HMPREF1058_01118 {ECO:0000256|HAMAP-Rule:MF_00048}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
L3_106_000M1_scaffold_3935_10
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10838..11113
DNA (276bp) protein (92aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=R7NN81_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDF17941.1}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
hypothetical protein
L3_106_000M1_scaffold_3935_11
Bacteroides sp. 3_1_33FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11151..11549
DNA (399bp) protein (133aa)
tRNA-specific adenosine deaminase {ECO:0000256|HAMAP-Rule:MF_00972}; EC=3.5.4.33 {ECO:0000256|HAMAP-Rule:MF_00972};; TaxID=457391 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_33FAA.;"
Cytidine and deoxycytidylate deaminase zinc-binding region n=12 Tax=Bacteroides RepID=C3Q5Y8_9BACE
cytosine/adenosine deaminase
L3_106_000M1_scaffold_3935_12
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11553..11855)
DNA (303bp) protein (101aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=I9UH19_BACVU
Uncharacterized protein {ECO:0000313|EMBL:EIY81543.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
hypothetical protein
L3_106_000M1_scaffold_3935_13
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11909..12616)
DNA (708bp) protein (236aa)
CDP-diacylglycerol-serine O-phosphatidyltransferase n=7 Tax=Bacteroides RepID=A6L1J4_BACV8
CDP-diacylglycerol--serine O-phosphatidyltransferase
CDP-alcohol phosphatidyltransferase family protein {ECO:0000313|EMBL:KDS23355.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
L3_106_000M1_scaffold_3935_14
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12628..13314)
DNA (687bp) protein (229aa)
phosphatidylserine decarboxylase (EC:4.1.1.65)
Phosphatidylserine decarboxylase proenzyme {ECO:0000256|HAMAP-Rule:MF_00664, ECO:0000256|SAAS:SAAS00154492}; EC=4.1.1.65 {ECO:0000256|HAMAP-Rule:MF_00664, ECO:0000256|SAAS:SAAS00093350};; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
Phosphatidylserine decarboxylase proenzyme n=9 Tax=root RepID=PSD_BACV8
L3_106_000M1_scaffold_3935_15
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13506..17303
DNA (3798bp) protein (1266aa)
DNA-directed DNA polymerase {ECO:0000256|SAAS:SAAS00057170}; EC=2.7.7.7 {ECO:0000256|SAAS:SAAS00057170};; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
DNA polymerase III alpha subunit n=5 Tax=Bacteroides RepID=A6L1J6_BACV8
DNA polymerase III subunit alpha
L3_106_000M1_scaffold_3935_16
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17345..17659
DNA (315bp) protein (105aa)
Thioredoxin n=15 Tax=Bacteroides RepID=A6L1J7_BACV8
thioredoxin
Thioredoxin {ECO:0000256|PIRNR:PIRNR000077}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L3_106_000M1_scaffold_3935_17
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17695..18030
DNA (336bp) protein (112aa)
Uncharacterized protein n=7 Tax=Bacteroides RepID=A6L1J8_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EOS03740.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L3_106_000M1_scaffold_3935_18
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18210..19769
DNA (1560bp) protein (520aa)
Uncharacterized protein n=1 Tax=Bacteroides vulgatus CAG:6 RepID=R7P0Y6_9BACE
Plasmid pRiA4b ORF-3-like family protein {ECO:0000313|EMBL:KDS23383.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
hypothetical protein
L3_106_000M1_scaffold_3935_19
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20013..20441)
DNA (429bp) protein (143aa)
YjeE family ATPase n=7 Tax=Bacteroides RepID=I9A1B8_BACVU
ATPase/GTPase
YjeE family ATPase {ECO:0000313|EMBL:EIY81535.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
L3_106_000M1_scaffold_3935_20
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20425..21276)
DNA (852bp) protein (284aa)
Zinc ABC transporter permease n=6 Tax=Bacteroides RepID=A6L1K2_BACV8
zinc ABC transporter permease
Uncharacterized protein {ECO:0000313|EMBL:EIY81534.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
L3_106_000M1_scaffold_3935_21
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21329..21748)
DNA (420bp) protein (140aa)
Uncharacterized protein n=6 Tax=Bacteroides RepID=A6L1K3_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDF17929.1}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
L3_106_000M1_scaffold_3935_22
Bacteroides sp. 3_1_40A, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21753..22982)
DNA (1230bp) protein (410aa)
3-phosphoshikimate 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|RuleBase:RU000531}; EC=2.5.1.19 {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|RuleBase:RU000531};; 5-enolpyruvylshikimate-3-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00210}; TaxID=469593 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_40A.;"
3-phosphoshikimate 1-carboxyvinyltransferase n=3 Tax=Bacteroides RepID=A6L1K4_BACV8
3-phosphoshikimate 1-carboxyvinyltransferase
L3_106_000M1_scaffold_3935_23
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23141..24193)
DNA (1053bp) protein (351aa)
Fructose-bisphosphate aldolase class 1 {ECO:0000313|EMBL:KDS23373.1}; EC=4.1.2.13 {ECO:0000313|EMBL:KDS23373.1};; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
fructose-bisphosphate aldolase (EC:4.1.2.13)
Deoxyribose-phosphate aldolase n=3 Tax=Bacteroides RepID=C6Z4R7_9BACE
L3_106_000M1_scaffold_3935_24
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24345..25139)
DNA (795bp) protein (265aa)
2,3-bisphosphoglycerate-dependent phosphoglycerate mutase {ECO:0000256|HAMAP-Rule:MF_01039, ECO:0000256|RuleBase:RU004512}; Short=BPG-dependent PGAM {ECO:0000256|HAMAP-Rule:MF_01039};; Short=PGAM {ECO:0000256|HAMAP-Rule:MF_01039};; Short=Phosphoglyceromutase {ECO:0000256|HAMAP-Rule:MF_01039};; Short=dPGM {ECO:0000256|HAMAP-Rule:MF_01039};; EC=5.4.2.11 {ECO:0000256|HAMAP-Rule:MF_01039, ECO:0000256|RuleBase:RU004512};; TaxID=702446 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus PC510.;"
2,3-bisphosphoglycerate-dependent phosphoglycerate mutase n=2 Tax=Bacteroides RepID=E5UY66_9BACE
gpmA; phosphoglyceromutase
L3_106_000M1_scaffold_3935_25
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25270..26058
DNA (789bp) protein (263aa)
Uncharacterized protein n=5 Tax=Bacteroides RepID=I9J504_BACVU
ADP-ribosylglycohydrolase
ADP-ribosylglycohydrolase family protein {ECO:0000313|EMBL:KDS23345.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
L3_106_000M1_scaffold_3935_26
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26039..27103)
DNA (1065bp) protein (355aa)
DNA polymerase IV {ECO:0000256|HAMAP-Rule:MF_01113}; Short=Pol IV {ECO:0000256|HAMAP-Rule:MF_01113};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_01113};; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
DNA polymerase IV n=6 Tax=Bacteroides RepID=D4V4E9_BACVU
DNA damage-inducible protein
L3_106_000M1_scaffold_3935_27
unknown

Not on your lists

comp(27302..27424)
DNA (123bp) protein (41aa)

This feature has no annotations

L3_106_000M1_scaffold_3935_28
Bacteroides intestinalis CAG:315, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27591..28742)
DNA (1152bp) protein (384aa)
Uncharacterized protein n=1 Tax=Bacteroides intestinalis CAG:315 RepID=R7E360_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDD96746.1}; TaxID=1263048 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides intestinalis CAG:315.;"
hypothetical protein
L3_106_000M1_scaffold_3935_29
unknown

Not on your lists

comp(28778..29320)
DNA (543bp) protein (181aa)

This feature has no annotations

L3_106_000M1_scaffold_3935_30
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29504..29899)
DNA (396bp) protein (132aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. CAG:98 RepID=R7NLI1_9BACE
Uncharacterized protein {ECO:0000313|EMBL:KDS71046.1}; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
hypothetical protein
Displaying items 1-30 of 43 in total

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