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L3_106_000M1_scaffold_5658

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_106_000M1_scaffold_5658_1
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(1..477)
DNA (477bp) protein (159aa)
Uncharacterized protein n=1 Tax=Bacteroides dorei CAG:222 RepID=R6HHR8_9BACE
starch-binding protein
SusD family protein {ECO:0000313|EMBL:EET15247.1}; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
L3_106_000M1_scaffold_5658_2
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(492..3563)
DNA (3072bp) protein (1024aa)
Putative outer membrane protein, probably involved in nutrient binding n=1 Tax=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154) RepID=A6KWG2_BACV8
hypothetical protein
TonB-linked outer membrane , SusC/RagA family protein {ECO:0000313|EMBL:KDS29326.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
L3_106_000M1_scaffold_5658_3
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(3605..5503)
DNA (1899bp) protein (633aa)
Glycosyl hydrolase, family 43 n=2 Tax=Bacteroides RepID=C6Z2Z0_9BACE
Glycosyl hydrolase, family 43 {ECO:0000313|EMBL:EET15249.2}; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
beta-xylosidase/alpha-L-arabinofuranosidase
L3_106_000M1_scaffold_5658_4
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(5691..6662)
DNA (972bp) protein (324aa)
Glycoside hydrolase family 43, candidate beta-xylosidase/alpha-L-arabinofuranosidase n=5 Tax=Bacteria RepID=A6KWG4_BACV8
beta-xylosidase/alpha-L-arabinofuranosidase
Glycoside hydrolase family 43 candidate beta-xylosidase/alpha-L-arabinofuranosidase {ECO:0000313|EMBL:CDF18288.1}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
L3_106_000M1_scaffold_5658_5
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(6675..7796)
DNA (1122bp) protein (374aa)
Beta-xylanase {ECO:0000256|RuleBase:RU361174}; EC=3.2.1.8 {ECO:0000256|RuleBase:RU361174};; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
Glycoside hydrolase family 10, candidate beta-xylanase n=5 Tax=Bacteroides RepID=A6KWG5_BACV8
beta-xylanase
L3_106_000M1_scaffold_5658_6
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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8009..8974
DNA (966bp) protein (322aa)
Transposase n=2 Tax=Bacteroides RepID=A6KWG6_BACV8
transposase
Transposase {ECO:0000313|EMBL:CDF18290.1}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
L3_106_000M1_scaffold_5658_7
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(9145..10611)
DNA (1467bp) protein (489aa)
Sugar (Glycoside-Pentoside-Hexuronide) transporter n=5 Tax=Bacteroides RepID=R7P027_9BACE
cation symporter
Putative cation symporter {ECO:0000313|EMBL:ABR37773.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
L3_106_000M1_scaffold_5658_8
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(10838..11443)
DNA (606bp) protein (202aa)
Glycoside hydrolase family 16, candidate beta-glycosidase n=4 Tax=Bacteria RepID=A6KWG8_BACV8
beta-glycosidase
Glycoside hydrolase family 16 candidate beta-glycosidase {ECO:0000313|EMBL:CDF18292.1}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
L3_106_000M1_scaffold_5658_9
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(11514..12887)
DNA (1374bp) protein (458aa)
Phosphoglucomutase/phosphomannomutase n=7 Tax=Bacteria RepID=A6KWH0_BACV8
phosphoglucomutase/phosphomannomutase
Phosphoglucosamine mutase {ECO:0000313|EMBL:EIY77739.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
L3_106_000M1_scaffold_5658_10
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(12884..13519)
DNA (636bp) protein (212aa)
Uncharacterized protein n=2 Tax=Bacteroides vulgatus RepID=A6KWB7_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KDS26375.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
L3_106_000M1_scaffold_5658_11
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13602..14642)
DNA (1041bp) protein (347aa)
DHHA1 domain protein n=4 Tax=Bacteria RepID=D4V8N4_BACVU
exopolyphosphatase-like protein
DHHA1 domain protein {ECO:0000313|EMBL:KDS54589.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
L3_106_000M1_scaffold_5658_12
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(14692..16611)
DNA (1920bp) protein (640aa)
Competence protein n=1 Tax=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154) RepID=A6KWB9_BACV8
competence protein
ComEC/Rec2-related domain protein {ECO:0000313|EMBL:KDS26401.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
L3_106_000M1_scaffold_5658_13
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16658..17311)
DNA (654bp) protein (218aa)
Ribulose-phosphate 3-epimerase {ECO:0000256|PIRNR:PIRNR001461}; EC=5.1.3.1 {ECO:0000256|PIRNR:PIRNR001461};; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
Ribulose-phosphate 3-epimerase n=6 Tax=Bacteroides RepID=A6KWC0_BACV8
ribulose-phosphate 3-epimerase
L3_106_000M1_scaffold_5658_14
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17387..18682)
DNA (1296bp) protein (432aa)
Uncharacterized protein n=4 Tax=Bacteroides RepID=A6KWC1_BACV8
Outer membrane beta-barrel domain protein {ECO:0000313|EMBL:KDS26422.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
hypothetical protein
L3_106_000M1_scaffold_5658_15
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18685..19086)
DNA (402bp) protein (134aa)
Sigma-70 region 2 n=8 Tax=Bacteria RepID=D4V8N8_BACVU
RNA polymerase sigma factor, sigma-70 family protein {ECO:0000313|EMBL:KDS26443.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
RNA polymerase ECF-type sigma factor
Displaying 15 items

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