ggKbase home page

L3_106_000M1_scaffold_12979

Search features with annotation key words

Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_106_000M1_scaffold_12979_1
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

506..751
DNA (246bp) protein (82aa)
RNA-binding proteins (RRM domain) n=23 Tax=Bacteroides RepID=D6D678_9BACE
RNA-binding protein rbpA
RNA recognition motif family protein {ECO:0000313|EMBL:KDS11399.1}; TaxID=1339346 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus str. 3725 D1 iv.;"
L3_106_000M1_scaffold_12979_2
Bacteroides sp. 1_1_30, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(818..1588)
DNA (771bp) protein (257aa)
ABC-type transport system involved in resistance to organic solvents, ATPase component n=10 Tax=Bacteroides RepID=D6D677_9BACE
ABC-type transport system involved in resistance to organic solvents, ATPase component
Uncharacterized protein {ECO:0000313|EMBL:EGN06923.1}; TaxID=457387 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_30.;"
L3_106_000M1_scaffold_12979_3
Bacteroides sp. D22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1585..2328)
DNA (744bp) protein (248aa)
ABC transporter permease n=1 Tax=Bacteroides thetaiotaomicron dnLKV9 RepID=R9H994_BACT4
Membrane protein {ECO:0000313|EMBL:EFI15009.1}; TaxID=585544 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D22.;"
hypothetical protein
L3_106_000M1_scaffold_12979_4
Bacteroides xylanisolvens, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2404..3165
DNA (762bp) protein (254aa)
ABC-type (unclassified) transport system, ATPase component (EC:3.6.3.-)
ABC-type (Unclassified) transport system, ATPase component n=11 Tax=Bacteroides RepID=D6D675_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY88532.1}; TaxID=997892 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides xylanisolvens CL03T12C04.;"
L3_106_000M1_scaffold_12979_5
Bacteroides sp. 2_1_22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3294..4016)
DNA (723bp) protein (241aa)
GTPase Der n=1 Tax=Bacteroides ovatus CAG:22 RepID=R6JLY7_9BACE
ribosome-associated GTPase EngA
GTPase Der {ECO:0000256|HAMAP-Rule:MF_00195, ECO:0000256|RuleBase:RU004481}; GTP-binding protein EngA {ECO:0000256|HAMAP-Rule:MF_00195}; TaxID=469588 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_22.;"
L3_106_000M1_scaffold_12979_6
Bacteroides sp. D22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3973..4386)
DNA (414bp) protein (138aa)
GTPase Der n=9 Tax=Bacteroides RepID=D6D674_9BACE
ribosome-associated GTPase EngA
GTPase Der {ECO:0000256|HAMAP-Rule:MF_00195, ECO:0000256|RuleBase:RU004481}; GTP-binding protein EngA {ECO:0000256|HAMAP-Rule:MF_00195}; TaxID=585544 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D22.;"
L3_106_000M1_scaffold_12979_7
Bacteroides sp. D1, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4435..5316)
DNA (882bp) protein (294aa)
GTPase Era n=9 Tax=Bacteroides RepID=D6D673_9BACE
GTP-binding protein Era
GTPase Era {ECO:0000256|HAMAP-Rule:MF_00367, ECO:0000256|SAAS:SAAS00085723}; TaxID=556258 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D1.;"
L3_106_000M1_scaffold_12979_8
Bacteroides xylanisolvens, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5398..5955)
DNA (558bp) protein (186aa)
3-oxoacyl-[acyl-carrier-protein] synthase III (EC:2.3.1.180 2.3.1.41)
3-oxoacyl-[acyl-carrier-protein] synthase 3 {ECO:0000256|HAMAP-Rule:MF_01815}; EC=2.3.1.180 {ECO:0000256|HAMAP-Rule:MF_01815};; 3-oxoacyl-[acyl-carrier-protein] synthase III {ECO:0000256|HAMAP-Rule:MF_01815}; Beta-ketoacyl-ACP synthase III {ECO:0000256|HAMAP-Rule:MF_01815}; TaxID=702447 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides xylanisolvens SD CC 1b.;"
3-oxoacyl-[acyl-carrier-protein] synthase 3 n=4 Tax=Bacteroides RepID=C3QM29_9BACE
L3_106_000M1_scaffold_12979_9
Bacteroides sp. 3_1_23, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(6122..6307)
DNA (186bp) protein (62aa)
50S ribosomal protein L32 n=14 Tax=Bacteroides RepID=A7LQG1_BACOV
50S ribosomal protein L32 {ECO:0000256|HAMAP-Rule:MF_00340}; TaxID=457390 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_23.;"
50S ribosomal protein L32
L3_106_000M1_scaffold_12979_10
Bacteroides xylanisolvens, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6343..6828)
DNA (486bp) protein (162aa)
Uncharacterized protein n=8 Tax=Bacteroides RepID=D4WSK9_9BACE
COG1399 protein in cluster with ribosomal protein L32p, Bacteroidetes/Chlorobi subfamily {ECO:0000313|EMBL:CDM07433.1}; TaxID=702447 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides xylanisolvens SD CC 1b.;"
hypothetical protein
Displaying 10 items

View Taxonomy