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L3_106_000M1_scaffold_6498

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_106_000M1_scaffold_6498_1
[Clostridium] methylpentosum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(323..853)
DNA (531bp) protein (177aa)
RNA 2',3'-cyclic phosphodiesterase {ECO:0000256|HAMAP-Rule:MF_01940}; Short=RNA 2',3'-CPDase {ECO:0000256|HAMAP-Rule:MF_01940};; EC=3.1.4.- {ECO:0000256|HAMAP-Rule:MF_01940};; TaxID=537013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] methylpentosum DSM 5476.;"
2'-5' RNA ligase n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EIB1_9CLOT
2'-5' RNA ligase
L3_106_000M1_scaffold_6498_2
Eubacterium sp. CAG:180, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(864..2471)
DNA (1608bp) protein (536aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656};; TaxID=1262882 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:180.;"
ssrB; sensor signal transduction histidine kinase SsrB (EC:2.7.13.3)
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Eubacterium sp. CAG:180 RepID=R5N087_9FIRM
L3_106_000M1_scaffold_6498_3
Ruminococcus sp. CAG:488, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2468..3148)
DNA (681bp) protein (227aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:488 RepID=R5YQM7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA18902.1}; TaxID=1262959 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:488.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L3_106_000M1_scaffold_6498_4
Eubacterium sp. CAG:192, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3356..4021)
DNA (666bp) protein (222aa)
ABC-type antimicrobial peptide transport system ATPase component n=1 Tax=Eubacterium sp. CAG:192 RepID=R6GEE4_9FIRM
ABC-type antimicrobial peptide transport system ATPase component {ECO:0000313|EMBL:CDB12647.1}; TaxID=1262883 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:192.;"
antimicrobial peptide ABC transporter ATPase
L3_106_000M1_scaffold_6498_5
Clostridium sp. CAG:411, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4042..5232)
DNA (1191bp) protein (397aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:411 RepID=R7HXD9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE43931.1}; TaxID=1262802 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:411.;"
L3_106_000M1_scaffold_6498_6
Clostridium sp. CAG:411, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5239..6345)
DNA (1107bp) protein (369aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:411 RepID=R7HW55_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE43929.1}; TaxID=1262802 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:411.;"
L3_106_000M1_scaffold_6498_7
Clostridium kluyveri, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6802..8184
DNA (1383bp) protein (461aa)
Tryptophan synthase {ECO:0000256|SAAS:SAAS00015859}; EC=4.2.1.20 {ECO:0000256|SAAS:SAAS00015859};; TaxID=583346 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium kluyveri (strain NBRC 12016).;"
TrpB2 n=2 Tax=Clostridium kluyveri RepID=A5N1S4_CLOK5
tryptophan synthase subunit beta
Displaying 7 items

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