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L3_106_000M1_scaffold_821

Search features with annotation key words

Displaying items 1-30 of 53 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_106_000M1_scaffold_821_1
Firmicutes bacterium CAG:270, Firmicutes, Bacteria

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comp(308..1411)
DNA (1104bp) protein (368aa)
glycerol 2-dehydrogenase (NAD+) (EC:1.1.1.6)
Glycerol 2-dehydrogenase (NAD+) n=1 Tax=Firmicutes bacterium CAG:270 RepID=R7BWT2_9FIRM
Glycerol 2-dehydrogenase (NAD+) {ECO:0000313|EMBL:CDD70271.1}; TaxID=1263014 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:270.;"
L3_106_000M1_scaffold_821_2
Eubacterium sp. CAG:180, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1583..2263)
DNA (681bp) protein (227aa)
SNARE-like domain protein n=1 Tax=Eubacterium sp. CAG:180 RepID=R5MR46_9FIRM
SNARE-like domain protein {ECO:0000313|EMBL:CCY92174.1}; TaxID=1262882 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:180.;"
hypothetical protein
L3_106_000M1_scaffold_821_3
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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2532..3998
DNA (1467bp) protein (489aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6I8A0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB41646.1}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
phosphohydrolase
L3_106_000M1_scaffold_821_4
Clostridium sp. CAG:413, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4145..4855
DNA (711bp) protein (237aa)
ABC transporter related n=1 Tax=Clostridium sp. CAG:413 RepID=R6NQF3_9CLOT
ABC transporter related {ECO:0000313|EMBL:CDC10589.1}; TaxID=1262803 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:413.;"
ABC transporter
L3_106_000M1_scaffold_821_5
Clostridium sp. CAG:413, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4836..5657
DNA (822bp) protein (274aa)
Putative ABC transporter peremase protein n=1 Tax=Clostridium sp. CAG:413 RepID=R6NWF9_9CLOT
Putative ABC transporter peremase protein {ECO:0000313|EMBL:CDC10591.1}; TaxID=1262803 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:413.;"
ABC transporter permease
L3_106_000M1_scaffold_821_6
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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5725..6327
DNA (603bp) protein (201aa)
Putative cyclase n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6I6K7_9FIRM
Putative cyclase {ECO:0000313|EMBL:CDB42109.1}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
cyclase family protein
L3_106_000M1_scaffold_821_7
Clostridium sp. CAG:413, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6547..7161
DNA (615bp) protein (205aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:413 RepID=R6P001_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC11851.1}; TaxID=1262803 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:413.;"
capM; capsular polysaccharide synthesis enzyme
L3_106_000M1_scaffold_821_8
Anaerotruncus sp. CAG:528, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7279..10326
DNA (3048bp) protein (1016aa)
Beta-galactosidase {ECO:0000256|RuleBase:RU361154, ECO:0000256|SAAS:SAAS00046613}; EC=3.2.1.23 {ECO:0000256|RuleBase:RU361154, ECO:0000256|SAAS:SAAS00046613};; Lactase {ECO:0000256|RuleBase:RU361154}; TaxID=1262700 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus; environmental samples.;" source="Anaerotruncus sp. CAG:528.;"
Beta-galactosidase n=1 Tax=Anaerotruncus sp. CAG:528 RepID=R5XDE8_9FIRM
beta-galactosidase
L3_106_000M1_scaffold_821_9
Paenibacillus macerans, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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10452..11390
DNA (939bp) protein (313aa)
Transcriptional regulator DeoR family n=1 Tax=Acetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC 1655) RepID=H6LHP7_ACEWD
DeoR-like helix-turn-helix domain protein {ECO:0000313|EMBL:KFN07992.1}; TaxID=44252 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus macerans (Bacillus macerans).;"
transcriptional regulator DeoR family
L3_106_000M1_scaffold_821_10
Anaerotruncus sp. G3(2012), Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

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11466..11732
DNA (267bp) protein (89aa)
Uncharacterized protein n=1 Tax=Anaerotruncus sp. G3(2012) RepID=R9M5G1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS63107.1}; TaxID=1235835 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus sp. G3(2012).;"
hypothetical protein
L3_106_000M1_scaffold_821_11
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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12252..12929
DNA (678bp) protein (226aa)
Mg2+ transporter-C family protein n=2 Tax=Clostridiales RepID=B0NJP5_CLOSV
Uncharacterized protein {ECO:0000313|EMBL:EGN35260.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
mgtC; Magnesium-transporting ATPase protein C;Tn916-like, CTn7-Orf10
L3_106_000M1_scaffold_821_12
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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13163..13474
DNA (312bp) protein (104aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=B0NJP6_CLOSV
Uncharacterized protein {ECO:0000313|EMBL:EDS05123.1}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
putative conjugative transposon proteinTn916-like, CTn7-Orf8
L3_106_000M1_scaffold_821_13
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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13638..16403
DNA (2766bp) protein (922aa)
mgtA; Magnesium-transporting ATPase, P-type 1;Tn916-like, CTn7-Orf7 (EC:3.6.3.2)
magnesium-transporting ATPase n=1 Tax=Blautia producta RepID=UPI00035EA996
Magnesium-translocating P-type ATPase {ECO:0000313|EMBL:EGN35262.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
L3_106_000M1_scaffold_821_14
Anaerostipes caccae, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

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16413..16586
DNA (174bp) protein (58aa)
Uncharacterized protein n=3 Tax=Anaerostipes RepID=B0MCM8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDR97698.1}; TaxID=411490 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes caccae DSM 14662.;"
putative conjugative transposon proteinTn916-like, CTn7-Orf6
L3_106_000M1_scaffold_821_15
Anaerotruncus sp. G3(2012), Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

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16591..17553
DNA (963bp) protein (321aa)
Uncharacterized protein n=1 Tax=Anaerotruncus sp. G3(2012) RepID=R9LX22_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS63108.1}; TaxID=1235835 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus sp. G3(2012).;"
radical SAM protein
L3_106_000M1_scaffold_821_16
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(17653..18645)
DNA (993bp) protein (331aa)
Peptidase S15 n=1 Tax=Coprobacillus sp. 29_1 RepID=E7GAV7_9FIRM
Peptidase S15 {ECO:0000313|EMBL:EFW04773.1}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
peptidase S15
L3_106_000M1_scaffold_821_17
Clostridium sp. CAG:1013, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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19140..19664
DNA (525bp) protein (175aa)
Translation initiation factor IF-3 n=1 Tax=Clostridium sp. CAG:1013 RepID=R5AC27_9CLOT
Translation initiation factor IF-3 {ECO:0000256|HAMAP-Rule:MF_00080, ECO:0000256|RuleBase:RU000646}; TaxID=1262769 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1013.;"
translation initiation factor IF-3
L3_106_000M1_scaffold_821_18
Eubacterium sp. CAG:180, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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19682..19879
DNA (198bp) protein (66aa)
50S ribosomal protein L35 n=1 Tax=Eubacterium sp. CAG:180 RepID=R5MIU6_9FIRM
50S ribosomal protein L35 {ECO:0000256|HAMAP-Rule:MF_00514, ECO:0000256|RuleBase:RU000568}; TaxID=1262882 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:180.;"
LSU ribosomal protein L35P
L3_106_000M1_scaffold_821_19
Ruminococcus sp. CAG:563, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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19922..20278
DNA (357bp) protein (119aa)
50S ribosomal protein L20 n=1 Tax=Ruminococcus sp. CAG:563 RepID=R6DMQ5_9FIRM
50S ribosomal protein L20 {ECO:0000256|HAMAP-Rule:MF_00382, ECO:0000256|RuleBase:RU000560}; TaxID=1262961 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:563.;"
50S ribosomal protein L20
L3_106_000M1_scaffold_821_20
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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20357..21148
DNA (792bp) protein (264aa)
RNA methyltransferase TrmH family n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6HXC9_9FIRM
RNA methyltransferase TrmH family {ECO:0000313|EMBL:CDB41700.1}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
tRNA/rRNA methyltransferase SpoU
L3_106_000M1_scaffold_821_21
Eubacterium sp. CAG:180, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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21189..22400
DNA (1212bp) protein (404aa)
DNA protecting protein DprA n=1 Tax=Eubacterium sp. CAG:180 RepID=R5N371_9FIRM
DNA protecting protein DprA {ECO:0000313|EMBL:CCY91642.1}; TaxID=1262882 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:180.;"
DNA protecting protein DprA
L3_106_000M1_scaffold_821_22
Ruminococcus sp. CAG:563, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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22418..24565
DNA (2148bp) protein (716aa)
DNA topoisomerase 1 {ECO:0000256|HAMAP-Rule:MF_00952}; EC=5.99.1.2 {ECO:0000256|HAMAP-Rule:MF_00952};; DNA topoisomerase I {ECO:0000256|HAMAP-Rule:MF_00952}; TaxID=1262961 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:563.;"
DNA topoisomerase I (EC:5.99.1.2)
DNA topoisomerase 1 n=1 Tax=Ruminococcus sp. CAG:563 RepID=R6DK40_9FIRM
L3_106_000M1_scaffold_821_23
Ruminococcus sp. CAG:488, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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24587..25909
DNA (1323bp) protein (441aa)
Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO {ECO:0000256|HAMAP-Rule:MF_01037}; EC=2.1.1.74 {ECO:0000256|HAMAP-Rule:MF_01037};; Folate-dependent tRNA (uracil-5-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01037}; Folate-dependent tRNA(M-5-U54)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01037}; TaxID=1262959 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:488.;"
Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO n=1 Tax=Ruminococcus sp. CAG:488 RepID=R5Y6D2_9FIRM
tRNA:m(5)U-54 methyltransferase
L3_106_000M1_scaffold_821_24
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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25953..26960
DNA (1008bp) protein (336aa)
Phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_00019, ECO:0000256|SAAS:SAAS00054336}; EC=2.3.1.n2 {ECO:0000256|HAMAP-Rule:MF_00019, ECO:0000256|SAAS:SAAS00054327};; Acyl-ACP phosphotransacylase {ECO:0000256|HAMAP-Rule:MF_00019}; Acyl-[acyl-carrier-protein]--phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_00019}; Phosphate-acyl-ACP acyltransferase {ECO:0000256|HAMAP-Rule:MF_00019}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
plsX; putative glycerol-3-phosphate acyltransferase PlsY (together with PlsY) (EC:2.3.1.15)
Phosphate acyltransferase n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6I8E1_9FIRM
L3_106_000M1_scaffold_821_25
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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27013..27699
DNA (687bp) protein (229aa)
Ribonuclease 3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231299}; EC=3.1.26.3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231445};; Ribonuclease III {ECO:0000256|HAMAP-Rule:MF_00104}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
ribonuclease III (EC:3.1.26.3)
Ribonuclease 3 n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6HXC7_9FIRM
L3_106_000M1_scaffold_821_26
Eubacterium sp. CAG:180, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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27696..28703
DNA (1008bp) protein (336aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:180 RepID=R5MIT8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY91635.1}; TaxID=1262882 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:180.;"
hypothetical protein
L3_106_000M1_scaffold_821_27
Ruminococcus sp. CAG:563, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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28789..32358
DNA (3570bp) protein (1190aa)
Chromosome partition protein Smc n=1 Tax=Ruminococcus sp. CAG:563 RepID=R6EFS2_9FIRM
Chromosome partition protein Smc {ECO:0000256|HAMAP-Rule:MF_01894}; TaxID=1262961 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:563.;"
chromosome segregation protein SMC
L3_106_000M1_scaffold_821_28
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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32526..33464
DNA (939bp) protein (313aa)
Signal recognition particle receptor FtsY n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6IX59_9FIRM
Signal recognition particle receptor FtsY {ECO:0000256|HAMAP-Rule:MF_00920}; Short=SRP receptor {ECO:0000256|HAMAP-Rule:MF_00920};; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
signal recognition particle-docking protein FtsY
L3_106_000M1_scaffold_821_29
unknown

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33514..33816
DNA (303bp) protein (101aa)

This feature has no annotations

L3_106_000M1_scaffold_821_30
Eubacterium sp. CAG:180, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


33840..34448
DNA (609bp) protein (203aa)
Non-canonical purine NTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405, ECO:0000256|SAAS:SAAS00020486}; EC=3.6.1.19 {ECO:0000256|HAMAP-Rule:MF_01405, ECO:0000256|SAAS:SAAS00020468};; Non-standard purine NTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; Nucleoside-triphosphate diphosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; Nucleoside-triphosphate pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; TaxID=1262882 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:180.;"
non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family (EC:3.6.1.15)
Non-canonical purine NTP pyrophosphatase n=2 Tax=root RepID=R5N364_9FIRM
Displaying items 1-30 of 53 in total

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