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L3_106_000M1_scaffold_1881

Search features with annotation key words

Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_106_000M1_scaffold_1881_1
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(530..2305)
DNA (1776bp) protein (592aa)
Uncharacterized protein n=1 Tax=Clostridium sp. MSTE9 RepID=J1H527_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EJF40353.1}; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
myosin-crossreactive antigen
L3_106_000M1_scaffold_1881_2
Ruminococcus sp. CAG:353, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2438..3019)
DNA (582bp) protein (194aa)
Transcriptional regulator n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7KT42_9FIRM
Transcriptional regulator {ECO:0000313|EMBL:CDE79520.1}; TaxID=1262955 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:353.;"
TetR family transcriptional regulator
L3_106_000M1_scaffold_1881_3
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3276..3569)
DNA (294bp) protein (98aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RXY2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL65187.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
L3_106_000M1_scaffold_1881_4
unknown

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comp(4115..4429)
DNA (315bp) protein (105aa)

This feature has no annotations

L3_106_000M1_scaffold_1881_5
Eubacterium sp. CAG:180, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4609..5817
DNA (1209bp) protein (403aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:180 RepID=R5N678_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY92677.1}; TaxID=1262882 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:180.;"
hypothetical protein
L3_106_000M1_scaffold_1881_6
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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5975..8986
DNA (3012bp) protein (1004aa)
N-acetylmuramoyl-L-alanine amidase n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6ITD1_9FIRM
N-acetylmuramoyl-L-alanine amidase {ECO:0000313|EMBL:CDB41262.1}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
N-acetylmuramoyl-L-alanine amidase
L3_106_000M1_scaffold_1881_7
Candidatus Methanomassiliicoccus intestinalis, Methanomassiliicoccus, Methanomassiliicoccales, Thermoplasmata, Euryarchaeota, Archaea

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9269..9973
DNA (705bp) protein (235aa)
Uncharacterized protein n=1 Tax=Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1 RepID=R9T5I6_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGN26202.1}; TaxID=1295009 species="Archaea; Euryarchaeota; Thermoplasmata; Methanomassiliicoccales; Methanomassiliicoccaceae; Methanomassiliicoccus.;" source="Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1.;"
L3_106_000M1_scaffold_1881_8
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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10016..10222
DNA (207bp) protein (69aa)
2-oxoglutarate ferredoxin oxidoreductase, delta subunit (EC:1.2.7.3)
4Fe-4S binding domain protein n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6IT77_9FIRM
4Fe-4S binding domain protein {ECO:0000313|EMBL:CDB41207.1}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
L3_106_000M1_scaffold_1881_9
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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10251..11300
DNA (1050bp) protein (350aa)
Pyruvate flavodoxin/ferredoxin oxidoreductase thiamine diP-binding domain protein n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6I718_9FIRM
Pyruvate flavodoxin/ferredoxin oxidoreductase thiamine diP-binding domain protein {ECO:0000313|EMBL:CDB41206.1}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein
L3_106_000M1_scaffold_1881_10
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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11300..12064
DNA (765bp) protein (255aa)
vorA; Ketoisovalerate oxidoreductase subunit VorA (EC:1.2.7.7)
Thiamine pyrophosphate enzyme C-terminal TPP binding domain protein n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6HVZ9_9FIRM
Thiamine pyrophosphate enzyme C-terminal TPP binding domain protein {ECO:0000313|EMBL:CDB41205.1}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
L3_106_000M1_scaffold_1881_11
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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12057..12596
DNA (540bp) protein (180aa)
2-oxoglutarate ferredoxin oxidoreductase, gamma subunit (EC:1.2.7.3)
2-oxoacid:ferredoxin/flavodoxin oxidoreductase gamma subunit n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6I3Y7_9FIRM
2-oxoacid:ferredoxin/flavodoxin oxidoreductase gamma subunit {ECO:0000313|EMBL:CDB41204.1}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
L3_106_000M1_scaffold_1881_12
Enterococcus cecorum, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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13575..14024
DNA (450bp) protein (150aa)
NTP pyrophosphohydrolases including oxidative damage repair enzymes (EC:3.6.1.-)
Uncharacterized protein n=1 Tax=Enterococcus cecorum DSM 20682 = ATCC 43198 RepID=S1RKR2_9ENTE
Uncharacterized protein {ECO:0000313|EMBL:ESK60853.1}; TaxID=1121864 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus cecorum DSM 20682 = ATCC 43198.;"
L3_106_000M1_scaffold_1881_13
Turicibacter sanguinis, Turicibacter, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(14215..15057)
DNA (843bp) protein (281aa)
Phospholipase, patatin family n=2 Tax=Turicibacter RepID=D4W6H5_9FIRM
Phospholipase, patatin family {ECO:0000313|EMBL:EFF63442.1}; TaxID=702450 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Turicibacter.;" source="Turicibacter sanguinis PC909.;"
putative esterase of the alpha-beta hydrolase superfamily
L3_106_000M1_scaffold_1881_14
Blautia sp. CAG:37, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(15071..15646)
DNA (576bp) protein (192aa)
Nitroreductase family protein n=1 Tax=Blautia sp. CAG:37 RepID=R7JSB8_9FIRM
Nitroreductase family protein {ECO:0000313|EMBL:CDE66493.1}; TaxID=1262757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:37.;"
Nitroreductase
L3_106_000M1_scaffold_1881_15
Ruminococcus sp. CAG:488, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(15873..17159)
DNA (1287bp) protein (429aa)
triacylglycerol lipase (EC:3.1.1.3)
Triacylglycerol lipase n=1 Tax=Ruminococcus sp. CAG:488 RepID=R5YE06_9FIRM
Triacylglycerol lipase {ECO:0000313|EMBL:CDA19491.1}; TaxID=1262959 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:488.;"
L3_106_000M1_scaffold_1881_16
Clostridium sp. CAG:413, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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17745..18389
DNA (645bp) protein (215aa)
GGDEF domain protein (Selenocysteine protein) n=1 Tax=Clostridium sp. CAG:413 RepID=R6NQR3_9CLOT
GGDEF domain protein (Selenocysteine protein) {ECO:0000313|EMBL:CDC10744.1}; TaxID=1262803 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:413.;"
diguanylate cyclase
L3_106_000M1_scaffold_1881_17
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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18429..19532
DNA (1104bp) protein (368aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6I3L9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB41089.1}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
Phosphotransferase enzyme family.
L3_106_000M1_scaffold_1881_18
Paenibacillus sp. FSL R7-269, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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20569..20748
DNA (180bp) protein (60aa)
hypothetical protein n=1 Tax=Paenibacillus sp. HW567 RepID=UPI00036869E0
Uncharacterized protein {ECO:0000313|EMBL:ETT32282.1}; TaxID=1226755 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. FSL R7-269.;"
hypothetical protein
L3_106_000M1_scaffold_1881_19
unknown

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21287..21589
DNA (303bp) protein (101aa)

This feature has no annotations

L3_106_000M1_scaffold_1881_20
unknown

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21604..21879
DNA (276bp) protein (92aa)

This feature has no annotations

L3_106_000M1_scaffold_1881_21
Eubacterium sp. CAG:180, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(21941..22576)
DNA (636bp) protein (212aa)
Redox-sensing transcriptional repressor Rex n=1 Tax=Eubacterium sp. CAG:180 RepID=R5MHD0_9FIRM
Redox-sensing transcriptional repressor Rex {ECO:0000256|HAMAP-Rule:MF_01131}; TaxID=1262882 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:180.;"
rex; putative redox-sensing transcriptional regulator
L3_106_000M1_scaffold_1881_22
Ruminococcus sp. CAG:488, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(22590..23759)
DNA (1170bp) protein (390aa)
Putative isocitrate dehydrogenase n=1 Tax=Ruminococcus sp. CAG:488 RepID=R5Y403_9FIRM
Putative isocitrate dehydrogenase {ECO:0000313|EMBL:CDA19519.1}; TaxID=1262959 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:488.;"
hypothetical protein
L3_106_000M1_scaffold_1881_23
Ruminococcus sp. CAG:488, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23793..25727)
DNA (1935bp) protein (645aa)
aconitase (EC:4.2.1.3)
Putative aconitate hydratase n=1 Tax=Ruminococcus sp. CAG:488 RepID=R5XWQ8_9FIRM
Putative aconitate hydratase {ECO:0000313|EMBL:CDA19518.1}; TaxID=1262959 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:488.;"
L3_106_000M1_scaffold_1881_24
Clostridium tyrobutyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(25881..26699)
DNA (819bp) protein (273aa)
hypothetical protein n=1 Tax=Clostridium tyrobutyricum RepID=UPI0002F25414
Cof protein {ECO:0000313|EMBL:CDL92102.1}; TaxID=1408889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium tyrobutyricum DIVETGP.;"
putative hydrolase
L3_106_000M1_scaffold_1881_25
Eubacterium sp. CAG:180, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26864..28048)
DNA (1185bp) protein (395aa)
Cell cycle protein FtsW/RodA/SpoVE family n=2 Tax=root RepID=R5MGB7_9FIRM
Cell cycle protein FtsW/RodA/SpoVE family {ECO:0000313|EMBL:CCY90508.1}; TaxID=1262882 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:180.;"
cell cycle protein
L3_106_000M1_scaffold_1881_26
Ruminococcus sp. CAG:563, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(28448..28891)
DNA (444bp) protein (148aa)
RpiB/LacA/LacB family sugar-phosphate isomerase (EC:5.3.1.6)
Ribose 5-phosphate isomerase B n=1 Tax=Ruminococcus sp. CAG:563 RepID=R6DNN6_9FIRM
Ribose 5-phosphate isomerase B {ECO:0000313|EMBL:CDA90113.1}; TaxID=1262961 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:563.;"
L3_106_000M1_scaffold_1881_27
Firmicutes bacterium CAG:94, Firmicutes, Bacteria

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comp(28916..29617)
DNA (702bp) protein (234aa)
tRNA threonylcarbamoyl adenosine modification protein YeaZ n=1 Tax=Firmicutes bacterium CAG:94 RepID=R6YI82_9FIRM
tRNA threonylcarbamoyl adenosine modification protein YeaZ {ECO:0000313|EMBL:CDD31104.1}; TaxID=1262989 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:94.;"
peptidase M22 glycoprotease
L3_106_000M1_scaffold_1881_28
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(29614..29979)
DNA (366bp) protein (122aa)
Conserved hypothetical nucleotide-binding protein n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6I7J1_9FIRM
Conserved hypothetical nucleotide-binding protein {ECO:0000313|EMBL:CDB42459.1}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
conserved hypothetical nucleotide-binding protein
L3_106_000M1_scaffold_1881_29
Paenibacillus dendritiformis, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(30122..30823)
DNA (702bp) protein (234aa)
Uncharacterized protein n=1 Tax=Paenibacillus dendritiformis C454 RepID=H3SH45_9BACL
Uncharacterized protein {ECO:0000313|EMBL:EHQ61579.1}; TaxID=1131935 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus dendritiformis C454.;"
DNA alkylation repair protein
L3_106_000M1_scaffold_1881_30
Clostridium sp. CAG:413, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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30958..31143
DNA (186bp) protein (62aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:413 RepID=R6NB77_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC09363.1}; TaxID=1262803 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:413.;"
hypothetical protein
Displaying items 1-30 of 33 in total

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