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L3_106_000M1_scaffold_4656

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_106_000M1_scaffold_4656_1
Anaerococcus hydrogenalis, Anaerococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(264..614)
DNA (351bp) protein (117aa)
hypothetical protein n=1 Tax=Anaerococcus obesiensis RepID=UPI0002DFB86B
Uncharacterized protein {ECO:0000313|EMBL:EEB36816.1}; TaxID=561177 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Anaerococcus.;" source="Anaerococcus hydrogenalis DSM 7454.;"
L3_106_000M1_scaffold_4656_2
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(641..1810)
DNA (1170bp) protein (390aa)
Alcohol dehydrogenase, iron-dependent {ECO:0000313|EMBL:EDS11921.1}; EC=1.1.1.1 {ECO:0000313|EMBL:EDS11921.1};; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
Alcohol dehydrogenase, iron-dependent n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0P952_9FIRM
alcohol dehydrogenase
L3_106_000M1_scaffold_4656_3
unknown

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comp(1993..2874)
DNA (882bp) protein (294aa)

This feature has no annotations

L3_106_000M1_scaffold_4656_4
Eubacterium sp. CAG:180, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2893..3450)
DNA (558bp) protein (186aa)
PF08006 family protein n=1 Tax=Eubacterium sp. CAG:180 RepID=R5MQ63_9FIRM
PF08006 family protein {ECO:0000313|EMBL:CCY91844.1}; TaxID=1262882 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:180.;"
hypothetical protein
L3_106_000M1_scaffold_4656_5
Eubacterium sp. CAG:180, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3437..3784)
DNA (348bp) protein (116aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:180 RepID=R5MK62_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY91843.1}; TaxID=1262882 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:180.;"
PadR family transcriptional regulator
L3_106_000M1_scaffold_4656_6
unknown

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3975..5051
DNA (1077bp) protein (359aa)

This feature has no annotations

L3_106_000M1_scaffold_4656_7
Ruminococcus sp. CAG:488, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5174..6058
DNA (885bp) protein (295aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:488 RepID=R5Y6M6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA20489.1}; TaxID=1262959 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:488.;"
L3_106_000M1_scaffold_4656_8
Ruminococcus sp. CAG:563, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6187..6480
DNA (294bp) protein (98aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:563 RepID=R6E7S3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA92646.1}; TaxID=1262961 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:563.;"
L3_106_000M1_scaffold_4656_9
Clostridium sp. CAG:678, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6559..8160)
DNA (1602bp) protein (534aa)
Xylose transporter n=1 Tax=Clostridium sp. CAG:678 RepID=R5KM44_9CLOT
Xylose transporter {ECO:0000313|EMBL:CCY67915.1}; TaxID=1262831 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:678.;"
glycoside/pentoside/hexuronide transporter
L3_106_000M1_scaffold_4656_10
unknown

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comp(8207..8722)
DNA (516bp) protein (172aa)

This feature has no annotations

L3_106_000M1_scaffold_4656_11
Ruminococcus sp. CAG:563, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9121..10041
DNA (921bp) protein (307aa)
Ribosomal protein L11 methyltransferase {ECO:0000256|HAMAP-Rule:MF_00735, ECO:0000256|SAAS:SAAS00189466}; Short=L11 Mtase {ECO:0000256|HAMAP-Rule:MF_00735};; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_00735, ECO:0000256|SAAS:SAAS00189468};; TaxID=1262961 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:563.;"
ribosomal protein L11 methyltransferase (EC:2.1.1.-)
Ribosomal protein L11 methyltransferase n=1 Tax=Ruminococcus sp. CAG:563 RepID=R6DVK3_9FIRM
L3_106_000M1_scaffold_4656_12
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10280..10732
DNA (453bp) protein (151aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=R6PSM8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23769.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
TM2 domain-containing protein
L3_106_000M1_scaffold_4656_13
Oscillatoria acuminata, Oscillatoria, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(11207..11869)
DNA (663bp) protein (221aa)
Ankyrin n=1 Tax=Acetonema longum DSM 6540 RepID=F7NG61_9FIRM
ankyrin repeat-containing protein
Ankyrin repeat-containing protein {ECO:0000313|EMBL:AFY79868.1}; TaxID=56110 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Oscillatoria.;" source="Oscillatoria acuminata PCC 6304.;"
L3_106_000M1_scaffold_4656_14
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11909..12907)
DNA (999bp) protein (333aa)
NAD-dependent epimerase/dehydratase n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6IXK2_9FIRM
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:CDB42732.1}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
NAD-dependent epimerase/dehydratase
L3_106_000M1_scaffold_4656_15
unknown

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comp(12929..13063)
DNA (135bp) protein (45aa)

This feature has no annotations

L3_106_000M1_scaffold_4656_16
unknown

Not on your lists

comp(13281..13364)
DNA (84bp) protein (28aa)

This feature has no annotations

Displaying 16 items

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