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L3_106_000M1_scaffold_4792

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_106_000M1_scaffold_4792_1
Dorea sp. 5-2, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(424..735)
DNA (312bp) protein (104aa)
Uncharacterized protein n=1 Tax=Dorea sp. 5-2 RepID=R9NES7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS81648.1}; TaxID=1235798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea sp. 5-2.;"
hypothetical protein
L3_106_000M1_scaffold_4792_2
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(866..1108)
DNA (243bp) protein (81aa)
DNA-binding helix-turn-helix protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VRR5_9CLOT
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EDO61745.1}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
Helix-turn-helix.
L3_106_000M1_scaffold_4792_3
Firmicutes bacterium ASF500, Firmicutes, Bacteria

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1238..1732
DNA (495bp) protein (165aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium ASF500 RepID=V2YC12_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ESL13918.1}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
hypothetical protein
L3_106_000M1_scaffold_4792_4
Lachnospiraceae bacterium 3-2, Clostridiales, Clostridia, Firmicutes, Bacteria

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1809..2237
DNA (429bp) protein (143aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3-2 RepID=R9MC61_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS68403.1}; TaxID=1235799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-2.;"
Predicted transcriptional regulators
L3_106_000M1_scaffold_4792_5
Clostridium sp. CAG:413, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2295..3512)
DNA (1218bp) protein (406aa)
Metalloendopeptidase-like membrane protein n=1 Tax=Clostridium sp. CAG:413 RepID=R6P1U6_9CLOT
Metalloendopeptidase-like membrane protein {ECO:0000313|EMBL:CDC12446.1}; TaxID=1262803 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:413.;"
peptidase M23
L3_106_000M1_scaffold_4792_6
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3693..5222)
DNA (1530bp) protein (510aa)
Sodium/proline symporter n=1 Tax=Clostridium leptum CAG:27 RepID=R6N5U0_9CLOT
Sodium/proline symporter {ECO:0000313|EMBL:CDC03714.1}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
putP; sodium/proline symporter
L3_106_000M1_scaffold_4792_7
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5410..7635)
DNA (2226bp) protein (742aa)
Transglutaminase-like protein (Fragment) n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2B608_9CLOT
Transglutaminase-like protein {ECO:0000313|EMBL:ERI67665.1}; Flags: Fragment;; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
Transglutaminase-like enzymes, putative cysteine proteases
L3_106_000M1_scaffold_4792_8
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7632..8648)
DNA (1017bp) protein (339aa)
Uncharacterized protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YWJ0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF57123.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
hypothetical protein
L3_106_000M1_scaffold_4792_9
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8653..9582)
DNA (930bp) protein (310aa)
MoxR-like ATPases (EC:3.6.3.-)
ATPase family associated with various cellular activities (AAA) n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NTX3_9FIRM
ATPase family associated with various cellular activities (AAA) {ECO:0000313|EMBL:EDN00320.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
L3_106_000M1_scaffold_4792_10
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10222..11430
DNA (1209bp) protein (403aa)
Alcohol dehydrogenase class IV n=1 Tax=Clostridium sp. CAG:217 RepID=R6IL37_9CLOT
Alcohol dehydrogenase class IV {ECO:0000313|EMBL:CDB51028.1}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
iron-containing alcohol dehydrogenase
L3_106_000M1_scaffold_4792_11
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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11467..12675
DNA (1209bp) protein (403aa)
Glycosyltransferase group 2 family protein n=1 Tax=Clostridium leptum CAG:27 RepID=R6N5U4_9CLOT
Glycosyltransferase group 2 family protein {ECO:0000313|EMBL:CDC03719.1}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
sgtA; putative glycosyl transferase, family 2
Displaying 11 items

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