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L3_106_000M1_scaffold_5168

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_106_000M1_scaffold_5168_1
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(637..1590)
DNA (954bp) protein (318aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6HW29_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB41245.1}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
hypothetical protein
L3_106_000M1_scaffold_5168_2
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1622..2053)
DNA (432bp) protein (144aa)
Mini-ribonuclease 3 {ECO:0000256|HAMAP-Rule:MF_01468}; Short=Mini-3 {ECO:0000256|HAMAP-Rule:MF_01468};; Short=Mini-RNase 3 {ECO:0000256|HAMAP-Rule:MF_01468};; EC=3.1.26.- {ECO:0000256|HAMAP-Rule:MF_01468};; Mini-RNase III {ECO:0000256|HAMAP-Rule:MF_01468}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
Mini-ribonuclease 3 n=2 Tax=Clostridium RepID=A7VVP7_9CLOT
hypothetical protein
L3_106_000M1_scaffold_5168_3
Eubacterium sp. CAG:180, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2078..3349)
DNA (1272bp) protein (424aa)
GTPase Obg n=1 Tax=Eubacterium sp. CAG:180 RepID=R5MZY5_9FIRM
GTPase Obg {ECO:0000256|HAMAP-Rule:MF_01454}; GTP-binding protein Obg {ECO:0000256|HAMAP-Rule:MF_01454}; TaxID=1262882 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:180.;"
GTP-binding protein Obg/CgtA
L3_106_000M1_scaffold_5168_4
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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3639..4613
DNA (975bp) protein (325aa)
PhoH family protein n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6HVX4_9FIRM
PhoH family protein {ECO:0000313|EMBL:CDB41175.1}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
Phosphate starvation-inducible protein PhoH, predicted ATPase
L3_106_000M1_scaffold_5168_5
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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4600..5106
DNA (507bp) protein (169aa)
Endoribonuclease YbeY {ECO:0000256|HAMAP-Rule:MF_00009, ECO:0000256|SAAS:SAAS00023089}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00009, ECO:0000256|SAAS:SAAS00023108};; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
Endoribonuclease YbeY n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6I6Z1_9FIRM
conserved hypothetical protein TIGR00043
L3_106_000M1_scaffold_5168_6
Eubacterium sp. CAG:180, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5232..5717
DNA (486bp) protein (162aa)
dgkA; Diacylglycerol kinase (EC:2.7.1.107)
Prokaryotic diacylglycerol kinase n=1 Tax=Eubacterium sp. CAG:180 RepID=R5MGQ3_9FIRM
Prokaryotic diacylglycerol kinase {ECO:0000313|EMBL:CCY90890.1}; TaxID=1262882 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:180.;"
L3_106_000M1_scaffold_5168_7
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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5950..6843
DNA (894bp) protein (298aa)
GTPase Era n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6HTI5_9FIRM
GTPase Era {ECO:0000256|HAMAP-Rule:MF_00367, ECO:0000256|SAAS:SAAS00085723}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
GTP-binding protein Era
L3_106_000M1_scaffold_5168_8
Clostridium cellulovorans, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6876..7790
DNA (915bp) protein (305aa)
Adenylyltransferase n=1 Tax=Clostridium cellulovorans (strain ATCC 35296 / DSM 3052 / OCM 3 / 743B) RepID=D9SUI2_CLOC7
adenylyltransferase
Adenylyltransferase {ECO:0000313|EMBL:ADL52937.1}; TaxID=573061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium cellulovorans (strain ATCC 35296 / DSM 3052 / OCM 3 /; 743B).;"
L3_106_000M1_scaffold_5168_9
unknown

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7880..8047
DNA (168bp) protein (56aa)

This feature has no annotations

L3_106_000M1_scaffold_5168_10
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7998..8738
DNA (741bp) protein (247aa)
DNA repair protein RecO n=2 Tax=Clostridium RepID=A7VUC1_9CLOT
DNA repair protein RecO {ECO:0000256|HAMAP-Rule:MF_00201, ECO:0000256|SAAS:SAAS00018750}; Recombination protein O {ECO:0000256|HAMAP-Rule:MF_00201}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
DNA repair protein RecO
L3_106_000M1_scaffold_5168_11
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8811..11213
DNA (2403bp) protein (801aa)
Endonuclease MutS2 {ECO:0000256|HAMAP-Rule:MF_00092, ECO:0000256|SAAS:SAAS00084206}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00092, ECO:0000256|SAAS:SAAS00084246};; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
Endonuclease MutS2 n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6I3U3_9FIRM
MutS2 family protein
L3_106_000M1_scaffold_5168_12
unknown

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comp(12550..12777)
DNA (228bp) protein (76aa)

This feature has no annotations

Displaying 12 items

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