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L3_106_000M1_scaffold_2125

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Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_106_000M1_scaffold_2125_1
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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297..917
DNA (621bp) protein (207aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CM98_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO21787.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
L3_106_000M1_scaffold_2125_2
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1336..1863)
DNA (528bp) protein (176aa)
Spore maturation protein B n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4X9N7_9FIRM
Spore maturation protein B {ECO:0000313|EMBL:EGJ48363.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
spmB; spore maturation protein B
L3_106_000M1_scaffold_2125_3
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1866..2444)
DNA (579bp) protein (193aa)
Spore maturation protein A n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4X9N8_9FIRM
Spore maturation protein A {ECO:0000313|EMBL:EGJ48364.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
spmA; spore maturation protein A
L3_106_000M1_scaffold_2125_4
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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2714..2968
DNA (255bp) protein (85aa)
Transition state regulatory protein AbrB n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4X9N9_9FIRM
Transition state regulatory protein AbrB {ECO:0000313|EMBL:EGJ48365.2}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
AbrB family DNA-binding protein
L3_106_000M1_scaffold_2125_5
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3104..4480)
DNA (1377bp) protein (459aa)
Amidophosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485}; Short=ATase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485};; EC=2.4.2.14 {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485};; Glutamine phosphoribosylpyrophosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
purF; putative amidophosphoribosyltransferase (EC:2.4.2.14)
Amidophosphoribosyltransferase n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NRS4_9FIRM
L3_106_000M1_scaffold_2125_6
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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4684..5115
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XDQ7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ46953.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
L3_106_000M1_scaffold_2125_7
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5466..6785)
DNA (1320bp) protein (440aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4X9N6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ48362.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
Predicted membrane protein
L3_106_000M1_scaffold_2125_8
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6859..8010)
DNA (1152bp) protein (384aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4X9N5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ48361.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
hypothetical protein
L3_106_000M1_scaffold_2125_9
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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8223..10400
DNA (2178bp) protein (726aa)
Tetratricopeptide repeat protein n=2 Tax=Oscillibacter RepID=U2QLP1_9FIRM
Tetratricopeptide repeat protein {ECO:0000313|EMBL:ERK66463.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
hypothetical protein
L3_106_000M1_scaffold_2125_10
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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10497..10778
DNA (282bp) protein (94aa)
Sporulation protein YqfC n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XAE1_9FIRM
Sporulation protein YqfC {ECO:0000313|EMBL:EGJ47319.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
hypothetical protein
L3_106_000M1_scaffold_2125_11
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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10789..12018
DNA (1230bp) protein (410aa)
Sporulation protein YqfD n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XAE2_9FIRM
Sporulation protein YqfD {ECO:0000313|EMBL:EGJ47320.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
yqfD; putative stage IV sporulation protein
L3_106_000M1_scaffold_2125_12
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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12033..13007
DNA (975bp) protein (325aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XAE3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ47321.2}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
PhoH-like protein
L3_106_000M1_scaffold_2125_13
Firmicutes bacterium ASF500, Firmicutes, Bacteria

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comp(13835..14101)
DNA (267bp) protein (89aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium ASF500 RepID=V2YAN1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ESL13468.1}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
L3_106_000M1_scaffold_2125_14
Firmicutes bacterium ASF500, Firmicutes, Bacteria

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14190..14420
DNA (231bp) protein (77aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium ASF500 RepID=V2YD21_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ESL14253.1}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
helix-turn-helix domain-containing protein
L3_106_000M1_scaffold_2125_15
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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14459..15637
DNA (1179bp) protein (393aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XCY9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ46685.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
putative hydrolase
L3_106_000M1_scaffold_2125_16
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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15634..15954
DNA (321bp) protein (107aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XCZ0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ46686.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
L3_106_000M1_scaffold_2125_17
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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16857..17054
DNA (198bp) protein (66aa)
Uncharacterized protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NZ79_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM98728.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
L3_106_000M1_scaffold_2125_18
Firmicutes bacterium ASF500, Firmicutes, Bacteria

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17051..17707
DNA (657bp) protein (219aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium ASF500 RepID=V2YER1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ESL13671.1}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
hypothetical protein
L3_106_000M1_scaffold_2125_19
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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17860..18894
DNA (1035bp) protein (345aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XDB4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ46810.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
mreB; rod shape-determining protein MreB
L3_106_000M1_scaffold_2125_20
Blautia sp. KLE 1732, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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18986..19333
DNA (348bp) protein (116aa)
Transcriptional regulator, Spx/MgsR family n=2 Tax=Clostridiales RepID=U2EXI2_9FIRM
hypothetical protein
Transcriptional regulator, Spx/MgsR family {ECO:0000313|EMBL:ERI97756.1}; TaxID=1226324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia sp. KLE 1732.;"
L3_106_000M1_scaffold_2125_21
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(19705..20595)
DNA (891bp) protein (297aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XDB5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ46811.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
putative LysR family transcriptional regulator
L3_106_000M1_scaffold_2125_22
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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20835..21908
DNA (1074bp) protein (358aa)
N-acetyl-gamma-glutamyl-phosphate reductase {ECO:0000256|HAMAP-Rule:MF_00150, ECO:0000256|SAAS:SAAS00137393}; Short=AGPR {ECO:0000256|HAMAP-Rule:MF_00150};; EC=1.2.1.38 {ECO:0000256|HAMAP-Rule:MF_00150, ECO:0000256|SAAS:SAAS00137393};; N-acetyl-glutamate semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00150}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
argC; N-acetyl-gamma-glutamyl-phosphate reductase (EC:1.2.1.38)
N-acetyl-gamma-glutamyl-phosphate reductase n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XDB6_9FIRM
L3_106_000M1_scaffold_2125_23
Oscillibacter valericigenes, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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21944..23167
DNA (1224bp) protein (408aa)
argJ; glutamate N-acetyltransferase/amino-acid acetyltransferase (EC:2.3.1.1 2.3.1.35)
Arginine biosynthesis bifunctional protein ArgJ n=1 Tax=Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 / Sjm18-20) RepID=G4KUS7_OSCVS
Arginine biosynthesis bifunctional protein ArgJ {ECO:0000256|HAMAP-Rule:MF_01106}; TaxID=693746 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 /; Sjm18-20).;"
L3_106_000M1_scaffold_2125_24
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

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23183..24061
DNA (879bp) protein (293aa)
Acetylglutamate kinase {ECO:0000256|HAMAP-Rule:MF_00082, ECO:0000256|SAAS:SAAS00245375}; EC=2.7.2.8 {ECO:0000256|HAMAP-Rule:MF_00082, ECO:0000256|SAAS:SAAS00245383};; N-acetyl-L-glutamate 5-phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00082}; NAG kinase {ECO:0000256|HAMAP-Rule:MF_00082}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
argB; acetylglutamate kinase (EC:2.7.2.8)
Acetylglutamate kinase n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5SNT5_9FIRM
L3_106_000M1_scaffold_2125_25
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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24152..25375
DNA (1224bp) protein (408aa)
Acetylornithine aminotransferase {ECO:0000256|HAMAP-Rule:MF_01107}; Short=ACOAT {ECO:0000256|HAMAP-Rule:MF_01107};; EC=2.6.1.11 {ECO:0000256|HAMAP-Rule:MF_01107};; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
argD; acetylornithine/succinyldiaminopimelate aminotransferase (EC:2.6.1.11 2.6.1.17)
Acetylornithine aminotransferase n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XDB7_9FIRM
L3_106_000M1_scaffold_2125_26
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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25676..27163
DNA (1488bp) protein (496aa)
Na+/H+ antiporter NhaC n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XDB8_9FIRM
Na+/H+ antiporter NhaC {ECO:0000313|EMBL:EGJ46814.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
nhaC; sodium/proton antiporter NhaC
L3_106_000M1_scaffold_2125_27
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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27191..28294
DNA (1104bp) protein (368aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XDB9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ46815.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
hypothetical protein
L3_106_000M1_scaffold_2125_28
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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28566..29069
DNA (504bp) protein (168aa)
Transcription elongation factor GreA n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XDC0_9FIRM
Transcription elongation factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; Transcript cleavage factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
Transcription elongation factor
L3_106_000M1_scaffold_2125_29
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(29592..30359)
DNA (768bp) protein (256aa)
HTH-type transcriptional regulator, antitoxin HipB n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XDC5_9FIRM
HTH-type transcriptional regulator, antitoxin HipB {ECO:0000313|EMBL:EGJ46821.2}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
hypothetical protein
L3_106_000M1_scaffold_2125_30
unknown

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comp(30487..30591)
DNA (105bp) protein (35aa)

This feature has no annotations

Displaying 30 items

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