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L3_106_000M1_scaffold_3203

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_106_000M1_scaffold_3203_1
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(146..1036)
DNA (891bp) protein (297aa)
Resolvase protein n=2 Tax=Oscillibacter RepID=U2QEA2_9FIRM
Resolvase protein {ECO:0000313|EMBL:ERK62559.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
putative recombinase
L3_106_000M1_scaffold_3203_2
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1030..1743)
DNA (714bp) protein (238aa)
Resolvase protein n=2 Tax=Oscillibacter RepID=U2QEA2_9FIRM
Resolvase protein {ECO:0000313|EMBL:ERK62559.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
putative recombinase
L3_106_000M1_scaffold_3203_3
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1861..2058)
DNA (198bp) protein (66aa)
Uncharacterized protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NU38_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDN00385.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
L3_106_000M1_scaffold_3203_4
Firmicutes bacterium ASF500, Firmicutes, Bacteria

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comp(2073..3389)
DNA (1317bp) protein (439aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium ASF500 RepID=V2ZHX7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ESL14030.1}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
Relaxase/mobilization nuclease family protein
L3_106_000M1_scaffold_3203_5
Oscillibacter sp. 1-3, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3391..3708)
DNA (318bp) protein (106aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. 1-3 RepID=R9M2A5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS64968.1}; TaxID=1235797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. 1-3.;"
hypothetical protein
L3_106_000M1_scaffold_3203_6
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

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comp(3696..4871)
DNA (1176bp) protein (392aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5ASW6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX46038.1}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
hypothetical protein
L3_106_000M1_scaffold_3203_7
Clostridium sp. CAG:678, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5016..5984
DNA (969bp) protein (323aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:678 RepID=R5KJH2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY66965.1}; TaxID=1262831 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:678.;"
hypothetical protein
L3_106_000M1_scaffold_3203_8
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6157..7902)
DNA (1746bp) protein (582aa)
ABC transporter, ATP-binding protein n=1 Tax=Clostridium symbiosum WAL-14673 RepID=E9SUE1_CLOSY
ABC transporter, permease/ATP-binding protein {ECO:0000313|EMBL:EGB90913.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
ABC transporter
L3_106_000M1_scaffold_3203_9
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7899..9689)
DNA (1791bp) protein (597aa)
ABC transporter, ATP-binding protein n=1 Tax=Clostridium symbiosum WAL-14673 RepID=E9SUE2_CLOSY
ABC transporter, permease/ATP-binding protein {ECO:0000313|EMBL:EGB90912.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
ABC-type multidrug transport system, ATPase and permease components
L3_106_000M1_scaffold_3203_10
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9778..10398)
DNA (621bp) protein (207aa)
Uncharacterized protein n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8W6F9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOQ38747.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
transcriptional regulator, TetR family
L3_106_000M1_scaffold_3203_11
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10531..11340)
DNA (810bp) protein (270aa)
Uncharacterized protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NVC0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM99889.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
O-Methyltransferase involved in polyketide biosynthesis
L3_106_000M1_scaffold_3203_12
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11573..12088)
DNA (516bp) protein (172aa)
Uncharacterized protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NVB5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM99884.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
hypothetical protein
L3_106_000M1_scaffold_3203_13
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(12160..12945)
DNA (786bp) protein (262aa)
Metal cation transporter, ZIP family n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D2J2_9CLOT
Metal cation transporter, ZIP family {ECO:0000313|EMBL:EEG54448.1}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
Predicted divalent heavy-metal cations transporter
L3_106_000M1_scaffold_3203_14
unknown

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comp(12985..13107)
DNA (123bp) protein (41aa)

This feature has no annotations

L3_106_000M1_scaffold_3203_15
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13410..14096
DNA (687bp) protein (229aa)
Methyltransferase domain protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D2K1_9CLOT
Methyltransferase domain protein {ECO:0000313|EMBL:EEG54429.1}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
ubiquinone/menaquinone biosynthesis methyltransferase
L3_106_000M1_scaffold_3203_16
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14103..14357
DNA (255bp) protein (85aa)
Uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D2K2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEG54430.1}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
Copper chaperone
L3_106_000M1_scaffold_3203_17
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14727..15122)
DNA (396bp) protein (132aa)
Iron dependent repressor DNA binding domain protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D2L1_9CLOT
Iron dependent repressor DNA binding domain protein {ECO:0000313|EMBL:EEG54439.1}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
Mn-dependent transcriptional regulator
L3_106_000M1_scaffold_3203_18
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15389..15940
DNA (552bp) protein (184aa)
Uncharacterized protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6P2R6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM97388.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
hypothetical protein
L3_106_000M1_scaffold_3203_19
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15985..16407
DNA (423bp) protein (141aa)
Flavodoxin n=2 Tax=Clostridiales RepID=A6P2R7_9FIRM
Flavodoxin {ECO:0000313|EMBL:EDM97389.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
flavodoxin
L3_106_000M1_scaffold_3203_20
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16574..17437
DNA (864bp) protein (288aa)
Transcriptional regulator, AraC family n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D2L4_9CLOT
Transcriptional regulator, AraC family {ECO:0000313|EMBL:EEG54442.1}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
putative transcriptional regulator, AraC family
L3_106_000M1_scaffold_3203_21
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17606..17878
DNA (273bp) protein (91aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=A6P2R9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEG54443.1}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
hypothetical protein
L3_106_000M1_scaffold_3203_22
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17931..19898
DNA (1968bp) protein (656aa)
Heavy metal translocating P-type ATPase {ECO:0000313|EMBL:EDM97392.1}; EC=3.6.3.- {ECO:0000313|EMBL:EDM97392.1};; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
Heavy metal translocating P-type ATPase n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6P2S0_9FIRM
ATPase, P-type (transporting), HAD superfamily, subfamily IC/heavy metal translocating P-type ATPase
Displaying 22 items

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