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L3_106_000M1_scaffold_3238

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_106_000M1_scaffold_3238_1
unknown

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comp(1..99)
DNA (99bp) protein (33aa)

This feature has no annotations

L3_106_000M1_scaffold_3238_2
Eubacterium sp. CAG:115, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1077..1760
DNA (684bp) protein (228aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:115 RepID=R5L502_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY74260.1}; TaxID=1262878 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:115.;"
hypothetical protein
L3_106_000M1_scaffold_3238_3
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2092..2805)
DNA (714bp) protein (238aa)
ntpD; V-type Na(+)-transporting ATPase D subunit (EC:3.6.3.15)
V-type ATP synthase subunit D n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4X9T5_9FIRM
V-type ATP synthase subunit D {ECO:0000256|HAMAP-Rule:MF_00271}; V-ATPase subunit D {ECO:0000256|HAMAP-Rule:MF_00271}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
L3_106_000M1_scaffold_3238_4
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2819..4252)
DNA (1434bp) protein (478aa)
ntpB; V-type Na(+)-transporting ATPase B subunit (EC:3.6.3.15)
V-type ATP synthase beta chain n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4X9T4_9FIRM
V-type ATP synthase beta chain {ECO:0000256|HAMAP-Rule:MF_00310}; V-ATPase subunit B {ECO:0000256|HAMAP-Rule:MF_00310}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
L3_106_000M1_scaffold_3238_5
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4249..6021)
DNA (1773bp) protein (591aa)
V-type ATP synthase alpha chain {ECO:0000256|HAMAP-Rule:MF_00309}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_00309};; V-ATPase subunit A {ECO:0000256|HAMAP-Rule:MF_00309}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
ntpA; V-type Na(+)-transporting ATPase A subunit (EC:3.6.3.15)
V-type ATP synthase alpha chain n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4X9T3_9FIRM
L3_106_000M1_scaffold_3238_6
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6310..6618)
DNA (309bp) protein (103aa)
ntpG; V-type Na(+)-transporting ATPase G subunit (EC:3.6.3.15)
V-type H+-transporting ATPase subunit F n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4X9T2_9FIRM
V-type H+-transporting ATPase subunit F {ECO:0000313|EMBL:EGJ47110.2}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
L3_106_000M1_scaffold_3238_7
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6634..7566)
DNA (933bp) protein (311aa)
ntpC; V-type Na(+)-transporting ATPase C subunit (EC:3.6.3.15)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4X9T1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ47109.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
L3_106_000M1_scaffold_3238_8
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7812..8507)
DNA (696bp) protein (232aa)
V-type proton ATPase subunit E n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4X9T0_9FIRM
V-type proton ATPase subunit E {ECO:0000256|HAMAP-Rule:MF_00311}; V-ATPase subunit E {ECO:0000256|HAMAP-Rule:MF_00311}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
H+transporting two-sector ATPase E subunit
L3_106_000M1_scaffold_3238_9
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8520..9044)
DNA (525bp) protein (175aa)
ntpK; V-type Na(+)-transporting ATPase K subunit (EC:3.6.3.15)
V-type H+-transporting ATPase subunit K n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4X9S9_9FIRM
V-type H+-transporting ATPase subunit K {ECO:0000313|EMBL:EGJ47107.2}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
L3_106_000M1_scaffold_3238_10
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9061..10971)
DNA (1911bp) protein (637aa)
ntpI; V-type Na(+)-transporting ATPase I subunit (EC:3.6.3.15)
V-type H+-transporting ATPase subunit I n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4X9S8_9FIRM
V-type H+-transporting ATPase subunit I {ECO:0000313|EMBL:EGJ47106.2}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
L3_106_000M1_scaffold_3238_11
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11011..11322)
DNA (312bp) protein (104aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4X9S7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ47105.2}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
hypothetical protein
L3_106_000M1_scaffold_3238_12
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11641..13473)
DNA (1833bp) protein (611aa)
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] {ECO:0000256|HAMAP-Rule:MF_00164, ECO:0000256|SAAS:SAAS00039584}; EC=2.6.1.16 {ECO:0000256|HAMAP-Rule:MF_00164};; D-fructose-6-phosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; GFAT {ECO:0000256|HAMAP-Rule:MF_00164}; Glucosamine-6-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00164}; Hexosephosphate aminotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; L-glutamine--D-fructose-6-phosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
glmS; glucosamine-6-phosphate synthase (EC:2.6.1.16)
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XDR2_9FIRM
L3_106_000M1_scaffold_3238_13
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13806..14372)
DNA (567bp) protein (189aa)
Maltose O-acetyltransferase n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XDR1_9FIRM
Maltose O-acetyltransferase {ECO:0000313|EMBL:EGJ46957.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
lacA; galactose-6-phosphate isomerase LacA subunit
L3_106_000M1_scaffold_3238_14
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14414..15322)
DNA (909bp) protein (303aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4X9S4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ47102.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
conserved protein of unknown function cotranscribed with Bmr (bmrU)
L3_106_000M1_scaffold_3238_15
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15545..16300
DNA (756bp) protein (252aa)
3-oxoacyl-[acyl-carrier protein] reductase n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4X9S5_9FIRM
3-oxoacyl-[acyl-carrier protein] reductase {ECO:0000313|EMBL:EGJ47103.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
short-chain dehydrogenase/reductase SDR
L3_106_000M1_scaffold_3238_16
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16479..17588
DNA (1110bp) protein (370aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4X9S6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ47104.2}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
hypothetical protein
L3_106_000M1_scaffold_3238_17
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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17794..18936
DNA (1143bp) protein (381aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2BW60_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KGF53251.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
hypothetical protein
L3_106_000M1_scaffold_3238_18
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19039..19434)
DNA (396bp) protein (132aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XAQ6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ47434.2}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
hypothetical protein
Displaying 18 items

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