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L3_106_000M1_scaffold_5283

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_106_000M1_scaffold_5283_1
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(222..1412)
DNA (1191bp) protein (397aa)
dpaL; diaminopropionate ammonia-lyase DpaL (EC:4.3.1.15)
Diaminopropionate ammonia-lyase n=1 Tax=Ruminococcaceae bacterium D16 RepID=T5RJD4_9FIRM
Diaminopropionate ammonia-lyase {ECO:0000313|EMBL:EQN60561.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
L3_106_000M1_scaffold_5283_2
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1611..2246)
DNA (636bp) protein (212aa)
Glycosyltransferase, MGT family n=1 Tax=Clostridium botulinum (strain Loch Maree / Type A3) RepID=B1KUW5_CLOBM
glycosyl transferase family protein
Glycosyltransferase, MGT family {ECO:0000313|EMBL:ACA54275.1}; TaxID=498214 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain Loch Maree / Type A3).;"
L3_106_000M1_scaffold_5283_3
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(2251..2532)
DNA (282bp) protein (94aa)
Transcriptional regulator, AbrB family n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9YE40_9FIRM
Transcriptional regulator, AbrB family {ECO:0000313|EMBL:EEF65737.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
AbrB family transcriptional regulator
L3_106_000M1_scaffold_5283_4
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2671..3114)
DNA (444bp) protein (148aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4X9B4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ48161.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
L3_106_000M1_scaffold_5283_5
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3117..3764)
DNA (648bp) protein (216aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4X9B5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ48162.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
hypothetical protein
L3_106_000M1_scaffold_5283_6
Clostridium clostridioforme CAG:132, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3814..4200)
DNA (387bp) protein (129aa)
Uncharacterized protein n=7 Tax=Clostridium RepID=N9WUD8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB62215.1}; TaxID=1263065 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:132.;"
hypothetical protein
L3_106_000M1_scaffold_5283_7
Clostridium sp. FS41, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4194..5459)
DNA (1266bp) protein (422aa)
Thioredoxin reductase {ECO:0000313|EMBL:KJJ70013.1}; EC=1.8.1.9 {ECO:0000313|EMBL:KJJ70013.1};; TaxID=1609975 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. FS41.;"
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5J4V9_9CLOT
NAD(FAD)-dependent dehydrogenase
L3_106_000M1_scaffold_5283_8
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5459..6922)
DNA (1464bp) protein (488aa)
Uncharacterized protein n=4 Tax=Clostridium bolteae RepID=A8RQH3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDP17035.1}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
FAD dependent oxidoreductase
L3_106_000M1_scaffold_5283_9
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7051..7719)
DNA (669bp) protein (223aa)
FCD domain protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0DAA5_9CLOT
FCD domain protein {ECO:0000313|EMBL:EEG51737.1}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
transcriptional regulator, GntR family
L3_106_000M1_scaffold_5283_10
Oscillibacter valericigenes, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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7924..9510
DNA (1587bp) protein (529aa)
putative glycoside hydrolase (EC:3.2.1.-)
Putative glycoside hydrolase {ECO:0000313|EMBL:BAL00723.1}; EC=3.2.1.- {ECO:0000313|EMBL:BAL00723.1};; TaxID=693746 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 /; Sjm18-20).;"
Putative glycoside hydrolase n=1 Tax=Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 / Sjm18-20) RepID=G4KWA2_OSCVS
L3_106_000M1_scaffold_5283_11
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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9710..10444
DNA (735bp) protein (245aa)
30S ribosomal protein S2 n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XDL2_9FIRM
30S ribosomal protein S2 {ECO:0000256|HAMAP-Rule:MF_00291}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
rpsB; 30S ribosomal protein S2
L3_106_000M1_scaffold_5283_12
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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10533..11453
DNA (921bp) protein (307aa)
Elongation factor Ts n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XDL1_9FIRM
Elongation factor Ts {ECO:0000256|HAMAP-Rule:MF_00050, ECO:0000256|RuleBase:RU000642}; Short=EF-Ts {ECO:0000256|HAMAP-Rule:MF_00050};; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
tsf; elongation factor Ts
Displaying 12 items

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