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L3_106_000M1_scaffold_4201

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_106_000M1_scaffold_4201_1
GWF2_Lentisphaerae_49_21_curated, Lentisphaerae, Bacteria

Not on your lists

comp(94..885)
DNA (792bp) protein (264aa)
lamB; endo-1,3-beta-glucanase (EC:3.2.1.39)
Glycosyl hydrolase family protein id=2851546 bin=GWF2_Lentisphaerae_49_21 species=Zunongwangia profunda genus=Zunongwangia taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Lentisphaerae_49_21 organism_group=Lentisphaerae organism_desc=Very large genome: good +
Tax=GWF2_Lentisphaerae_49_21_curated
L3_106_000M1_scaffold_4201_2
unknown

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comp(904..1566)
DNA (663bp) protein (221aa)

This feature has no annotations

L3_106_000M1_scaffold_4201_3
Caloramator australicus, Caloramator, Clostridiales, Clostridia, Firmicutes, Bacteria

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1749..2348
DNA (600bp) protein (200aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 6_1_37FAA RepID=E9RZ81_9FIRM
Periplasmic binding protein/LacI transcriptional regulator {ECO:0000313|EMBL:CCJ33414.1}; TaxID=857293 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caloramator.;" source="Caloramator australicus RC3.;"
transcriptional regulator
L3_106_000M1_scaffold_4201_4
unknown

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2302..2838
DNA (537bp) protein (179aa)

This feature has no annotations

L3_106_000M1_scaffold_4201_5
GWF2_Lentisphaerae_44_16_curated, Lentisphaerae, Bacteria

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comp(2857..3624)
DNA (768bp) protein (256aa)
Putative transcriptional regulator n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9L2J2_THERP
putative transcriptional regulator
Tax=GWF2_Lentisphaerae_44_16_curated
L3_106_000M1_scaffold_4201_6
RIFOXYC2_FULL_RIF01_39_67_curated, RIF1, Bacteria

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comp(3720..4592)
DNA (873bp) protein (291aa)
AraC family transcriptional regulator n=1 Tax=Paenibacillus elgii RepID=UPI000248C0A6
msmR; Msm operon regulatory protein
Tax=RIFOXYC2_FULL_RIF01_39_67_curated
L3_106_000M1_scaffold_4201_7

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4664..6577
DNA (1914bp) protein (638aa)
Alpha-L-fucosidase {ECO:0000313|EMBL:AIC77300.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Beta-galactosidase trimerisation domain protein id=4165332 bin=GWF2_Lentisphaerae_49_21 species=Mahella australiensis genus=Mahella taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Lentisphaerae_49_21 organism_group=Lentisphaerae organism_desc=Very large genome: good +
Alpha-L-fucosidase
L3_106_000M1_scaffold_4201_8
Lentisphaera araneosa, Lentisphaera, Lentisphaerales, Lentisphaeria, Lentisphaerae, Bacteria

Not on your lists

6577..7332
DNA (756bp) protein (252aa)
Uncharacterized protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XF88_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDM29160.1}; TaxID=313628 species="Bacteria; Lentisphaerae; Lentisphaeria; Lentisphaerales; Lentisphaeraceae; Lentisphaera.;" source="Lentisphaera araneosa HTCC2155.;"
prepilin-type N-terminal cleavage/methylation domain
L3_106_000M1_scaffold_4201_9
GWF2_Lentisphaerae_49_21_curated, Lentisphaerae, Bacteria

Not on your lists

7345..8406
DNA (1062bp) protein (354aa)
Glycoside hydrolase family 5 id=4622407 bin=GWF2_Lentisphaerae_49_21 species=unknown genus=unknown taxon_order=unknown taxon_class=Opitutae phylum=Verrucomicrobia tax=GWF2_Lentisphaerae_49_21 organism_group=Lentisphaerae organism_desc=Very large genome: good +
glycoside hydrolase family 5
Tax=GWF2_Lentisphaerae_49_21_curated
L3_106_000M1_scaffold_4201_10
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8886..9977
DNA (1092bp) protein (364aa)
Regulatory protein GntR n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1LX83_9CLOT
Transcriptional regulator, LacI family {ECO:0000313|EMBL:CDP52518.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
gntR; regulatory protein GntR
L3_106_000M1_scaffold_4201_11
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9999..10934
DNA (936bp) protein (312aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi 12489931 RepID=N9VT98_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY93940.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
glycerophosphoryl diester phosphodiesterase
L3_106_000M1_scaffold_4201_12
GWF2_Lentisphaerae_49_21_curated, Lentisphaerae, Bacteria

Not on your lists

11036..11800
DNA (765bp) protein (255aa)
Type II secretory pathway pseudopilin PulG-like protein id=3363231 bin=GWF2_Lentisphaerae_49_21 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWF2_Lentisphaerae_49_21 organism_group=Lentisphaerae organism_desc=Very large genome: good +
N-terminal cleavage protein
Tax=GWF2_Lentisphaerae_49_21_curated
L3_106_000M1_scaffold_4201_13
Opitutaceae bacterium TAV1, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

11802..14747
DNA (2946bp) protein (982aa)
Glycosyl hydrolase catalytic core n=1 Tax=Opitutaceae bacterium TAV1 RepID=I6B1S5_9BACT
Glycosyl hydrolase catalytic core {ECO:0000313|EMBL:EIQ01217.1}; Flags: Precursor;; TaxID=278956 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV1.;"
hypothetical protein
Displaying 13 items

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