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L3_106_000M1_scaffold_4574

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_106_000M1_scaffold_4574_1
GWF2_Lentisphaerae_52_8_curated, Lentisphaerae, Bacteria

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180..938
DNA (759bp) protein (253aa)
Xylose isomerase domain protein TIM barrel id=4155370 bin=GWF2_Lentisphaerae_52_8 species=unknown genus=Thermoanaerobacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Lentisphaerae_52_8 organism_group=Lentisphaerae
xylose isomerase
Tax=GWF2_Lentisphaerae_52_8_curated
L3_106_000M1_scaffold_4574_2
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

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970..2118
DNA (1149bp) protein (383aa)
Oxidoreductase domain protein id=3871487 bin=GWF2_Lentisphaerae_50_93 species=unknown genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
oxidoreductase domain-containing protein
Tax=GWF2_Lentisphaerae_50_93_curated
L3_106_000M1_scaffold_4574_3
Ruminococcus albus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2331..2885)
DNA (555bp) protein (185aa)
Nitroreductase n=1 Tax=Ruminococcus albus (strain ATCC 27210 / DSM 20455 / JCM 14654 / NCDO 2250 / 7) RepID=E6UIJ5_RUMA7
nitroreductase
Nitroreductase {ECO:0000313|EMBL:ADU23340.1}; TaxID=697329 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus albus (strain ATCC 27210 / DSM 20455 / JCM 14654 / NCDO; 2250 / 7).;"
L3_106_000M1_scaffold_4574_4

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comp(2909..3739)
DNA (831bp) protein (277aa)
glycerophosphoryl diester phosphodiesterase n=1 Tax=Paenibacillus sp. JC66 RepID=UPI000288DE44
Glycerophosphodiester phosphodiesterase {ECO:0000313|EMBL:AFD03124.1}; TaxID=1131000 species="Bacteria; environmental samples.;" source="uncultured bacterium W5-77b.;"
L3_106_000M1_scaffold_4574_5
GWF2_Lentisphaerae_44_16_curated, Lentisphaerae, Bacteria

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comp(3729..4586)
DNA (858bp) protein (286aa)
Two component transcriptional regulator, AraC family id=3654265 bin=GWF2_Lentisphaerae_52_8 species=Treponema caldaria genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWF2_Lentisphaerae_52_8 organism_group=Lentisphaerae
response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain
Tax=GWF2_Lentisphaerae_44_16_curated
L3_106_000M1_scaffold_4574_6
GWF2_Lentisphaerae_52_8_curated, Lentisphaerae, Bacteria

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4704..6011
DNA (1308bp) protein (436aa)
FAD-dependent pyridine nucleotide-disulfide oxidoreductase id=3654264 bin=GWF2_Lentisphaerae_52_8 species=Clostridium saccharolyticum genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Lentisphaerae_52_8 organism_group=Lentisphaerae
FAD-dependent pyridine nucleotide-disulfide oxidoreductase
Tax=GWF2_Lentisphaerae_52_8_curated
L3_106_000M1_scaffold_4574_7
Paenibacillus sp. Y412MC10, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(6135..7310)
DNA (1176bp) protein (392aa)
Transcriptional regulator, GntR family with LacI sensor n=2 Tax=Paenibacillus RepID=D3EC22_GEOS4
GntR family transcriptional regulator with LacI sensor
Transcriptional regulator, GntR family with LacI sensor {ECO:0000313|EMBL:ACX64990.1}; TaxID=481743 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Geobacillus sp. (strain Y412MC10).;"
L3_106_000M1_scaffold_4574_8
unknown

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comp(7541..10639)
DNA (3099bp) protein (1033aa)

This feature has no annotations

L3_106_000M1_scaffold_4574_9
RIFOXYB12_FULL_Lentisphaerae_65_16_curated, Lentisphaerae, Bacteria

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comp(10655..11281)
DNA (627bp) protein (209aa)
hypothetical protein n=1 Tax=Verrucomicrobia bacterium SCGC AAA164-I21 RepID=UPI000375B760
N-terminal cleavage protein
Tax=RIFOXYB12_FULL_Lentisphaerae_65_16_curated
L3_106_000M1_scaffold_4574_10
Akkermansia sp. CAG:344, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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11656..12792
DNA (1137bp) protein (379aa)
Metallophosphoesterase n=1 Tax=Akkermansia sp. CAG:344 RepID=R7E5Z6_9BACT
Metallophosphoesterase {ECO:0000313|EMBL:CDD98170.1}; TaxID=1262691 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia; environmental samples.;" source="Akkermansia sp. CAG:344.;"
metallophosphoesterase
L3_106_000M1_scaffold_4574_11
Ruminococcus sp. CAG:403, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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12882..13499
DNA (618bp) protein (206aa)
Cytidylate kinase n=1 Tax=Ruminococcus sp. CAG:403 RepID=R7H205_9FIRM
Cytidylate kinase {ECO:0000313|EMBL:CDE33331.1}; TaxID=1262958 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:403.;"
hypothetical protein
L3_106_000M1_scaffold_4574_12
unknown

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comp(13537..13605)
DNA (69bp) protein (23aa)

This feature has no annotations

Displaying 12 items

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