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L3_106_000M1_scaffold_4810

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_106_000M1_scaffold_4810_1
unknown

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comp(117..1172)
DNA (1056bp) protein (352aa)
GntR family transcriptional regulator
L3_106_000M1_scaffold_4810_2
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

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comp(1698..2630)
DNA (933bp) protein (311aa)
thioredoxin reductase (EC:1.8.1.9)
Thioredoxin reductase id=2785538 bin=GWF2_Lentisphaerae_50_93 species=Rhodothermus marinus genus=Rhodothermus taxon_order=Bacteroidetes Order II. Incertae sedis taxon_class=unknown phylum=Bacteroidetes tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
Tax=GWF2_Lentisphaerae_50_93_curated
L3_106_000M1_scaffold_4810_3
GWF2_Lentisphaerae_44_16_curated, Lentisphaerae, Bacteria

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comp(2643..4541)
DNA (1899bp) protein (633aa)
asnB; asparagine synthetase [glutamine-hydrolyzing] 1 (EC:6.3.5.4)
asparagine synthase id=4427765 bin=GWF2_Lentisphaerae_50_93 species=unidentified genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
Tax=GWF2_Lentisphaerae_44_16_curated
L3_106_000M1_scaffold_4810_4
GWF2_Lentisphaerae_52_8_curated, Lentisphaerae, Bacteria

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4656..5543
DNA (888bp) protein (296aa)
Thiamine monophosphate kinase id=4110467 bin=GWF2_Lentisphaerae_52_8 species=Methylacidiphilum infernorum genus=Methylacidiphilum taxon_order=Methylacidiphilales taxon_class=unknown phylum=Verrucomicrobia tax=GWF2_Lentisphaerae_52_8 organism_group=Lentisphaerae
thiamine-monophosphate kinase
Tax=GWF2_Lentisphaerae_52_8_curated
L3_106_000M1_scaffold_4810_5
GWF2_Lentisphaerae_49_21_curated, Lentisphaerae, Bacteria

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5533..5973
DNA (441bp) protein (147aa)
YjeE family ATPase id=4162188 bin=GWF2_Lentisphaerae_49_21 species=Stomatobaculum longum genus=Stomatobaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Lentisphaerae_49_21 organism_group=Lentisphaerae organism_desc=Very large genome: good +
ATP/GTP hydrolase
Tax=GWF2_Lentisphaerae_49_21_curated
L3_106_000M1_scaffold_4810_6
Cyanothece sp. PCC 7425, Cyanothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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5976..6719
DNA (744bp) protein (248aa)
Abortive infection protein n=1 Tax=Cyanothece sp. (strain PCC 7425 / ATCC 29141) RepID=B8HPL6_CYAP4
abortive infection protein
Abortive infection protein {ECO:0000313|EMBL:ACL43877.1}; Flags: Precursor;; TaxID=395961 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Cyanothece.;" source="Cyanothece sp. (strain PCC 7425 / ATCC 29141).;"
L3_106_000M1_scaffold_4810_7
GWF2_Planctomycetes_42_9_curated, Phycisphaerae, Planctomycetes, Bacteria

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6814..8547
DNA (1734bp) protein (578aa)
Citrate transporter id=4674920 bin=GWF2_Planctomycetes_42_9 species=Candidatus Caldiarchaeum subterraneum genus=Candidatus Caldiarchaeum taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=GWF2_Planctomycetes_42_9 organism_group=Planctomycetes
citrate transporter
Tax=GWF2_Planctomycetes_42_9_curated
L3_106_000M1_scaffold_4810_8
unknown

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8767..9039
DNA (273bp) protein (91aa)

This feature has no annotations

L3_106_000M1_scaffold_4810_9
RIFOXYB12_FULL_Lentisphaerae_65_16_curated, Lentisphaerae, Bacteria

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9224..9451
DNA (228bp) protein (76aa)
50S ribosomal protein L28 id=3268137 bin=GWF2_Lentisphaerae_50_93 species=Lentisphaera araneosa genus=Lentisphaera taxon_order=Lentisphaerales taxon_class=Lentisphaeria phylum=Lentisphaerae tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
50S ribosomal protein L28
Tax=RIFOXYB12_FULL_Lentisphaerae_65_16_curated
L3_106_000M1_scaffold_4810_10
unknown

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9550..9738
DNA (189bp) protein (63aa)

This feature has no annotations

L3_106_000M1_scaffold_4810_11
Methanosaeta thermophila, Methanosaeta, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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9735..11405
DNA (1671bp) protein (557aa)
Na+/solute symporter n=1 Tax=Methanosaeta thermophila (strain DSM 6194 / PT) RepID=A0B6D5_METTP
Na+/solute symporter
Na+/solute symporter {ECO:0000313|EMBL:ABK14259.1}; TaxID=349307 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosaetaceae; Methanosaeta.;" source="Methanosaeta thermophila (strain DSM 6194 / PT) (Methanothrix; thermophila (strain DSM 6194 / PT)).;"
L3_106_000M1_scaffold_4810_12
GWF2_Lentisphaerae_49_21_curated, Lentisphaerae, Bacteria

Not on your lists

11411..12922
DNA (1512bp) protein (504aa)
Isoleucyl-tRNA synthetase (EC:6.1.1.5)
Isoleucine--tRNA ligase id=3210706 bin=GWF2_Lentisphaerae_49_21 species=Spirochaeta thermophila genus=Spirochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWF2_Lentisphaerae_49_21 organism_group=Lentisphaerae organism_desc=Very large genome: good +
Tax=GWF2_Lentisphaerae_49_21_curated
Displaying 12 items

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