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L3_106_000M1_scaffold_2510

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_106_000M1_scaffold_2510_1
GWF2_Lentisphaerae_45_14_curated, Lentisphaerae, Bacteria

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1..1362
DNA (1362bp) protein (454aa)
Integral membrane protein MviN id=3471375 bin=GWF2_Lentisphaerae_52_8 species=Desulfovibrio piezophilus genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Lentisphaerae_52_8 organism_group=Lentisphaerae
integral membrane protein MviN
Tax=GWF2_Lentisphaerae_45_14_curated
L3_106_000M1_scaffold_2510_2
GWF2_Lentisphaerae_44_16_curated, Lentisphaerae, Bacteria

Not on your lists

1681..2892
DNA (1212bp) protein (404aa)
LacI family transcriptional regulator n=1 Tax=Achromobacter xylosoxidans AXX-A RepID=F7T5W4_ALCXX
LacI family transcriptional regulator
Tax=GWF2_Lentisphaerae_44_16_curated
L3_106_000M1_scaffold_2510_3
GWF2_Lentisphaerae_49_21_curated, Lentisphaerae, Bacteria

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2921..3652
DNA (732bp) protein (244aa)
Putative uncharacterized protein id=3799080 bin=GWF2_Lentisphaerae_49_21 species=Opitutaceae bacterium TAV5 genus=unknown taxon_order=unknown taxon_class=Opitutae phylum=Verrucomicrobia tax=GWF2_Lentisphaerae_49_21 organism_group=Lentisphaerae organism_desc=Very large genome: good +
hypothetical protein
Tax=GWF2_Lentisphaerae_49_21_curated
L3_106_000M1_scaffold_2510_4
unknown

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3688..5580
DNA (1893bp) protein (631aa)

This feature has no annotations

L3_106_000M1_scaffold_2510_5
GWF2_Lentisphaerae_45_14_curated, Lentisphaerae, Bacteria

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5577..7142
DNA (1566bp) protein (522aa)
Extracellular solute-binding protein family 1 id=3060826 bin=GWF2_Lentisphaerae_49_21 species=Opitutaceae bacterium TAV5 genus=unknown taxon_order=unknown taxon_class=Opitutae phylum=Verrucomicrobia tax=GWF2_Lentisphaerae_49_21 organism_group=Lentisphaerae organism_desc=Very large genome: good +
hypothetical protein
Tax=GWF2_Lentisphaerae_45_14_curated
L3_106_000M1_scaffold_2510_6
Thermobaculum terrenum, Thermobaculum, Bacteria

Not on your lists

comp(7120..11190)
DNA (4071bp) protein (1357aa)
Carbohydrate-binding family 9 n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CGZ0_THET1
carbohydrate-binding family 9
Carbohydrate-binding family 9 {ECO:0000313|EMBL:ACZ43011.1}; Flags: Precursor;; TaxID=525904 species="Bacteria; Thermobaculum.;" source="Thermobaculum terrenum (strain ATCC BAA-798 / YNP1).;"
L3_106_000M1_scaffold_2510_7
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(11223..11948)
DNA (726bp) protein (242aa)
Competence protein ComGC-like protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XIL3_9BACT
Competence protein ComGC-like protein {ECO:0000313|EMBL:EEF60276.1}; Flags: Precursor;; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
prepilin-type N-terminal cleavage/methylation domain-containing protein
L3_106_000M1_scaffold_2510_8
Deinococcus geothermalis, Deinococcus, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

comp(11998..12996)
DNA (999bp) protein (333aa)
Transcriptional regulator, LacI family n=1 Tax=Deinococcus geothermalis (strain DSM 11300) RepID=Q1J2J7_DEIGD
LacI family transcriptional regulator
Transcriptional regulator, LacI family {ECO:0000313|EMBL:ABF44287.1}; TaxID=319795 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Deinococcaceae; Deinococcus.;" source="Deinococcus geothermalis (strain DSM 11300).;"
L3_106_000M1_scaffold_2510_9
GWF2_Lentisphaerae_52_8_curated, Lentisphaerae, Bacteria

Not on your lists

comp(13123..14718)
DNA (1596bp) protein (532aa)
sensory box histidine kinase (EC:2.7.3.-)
Two component system sensor histidine kinase, related to CopS id=4215468 bin=GWF2_Lentisphaerae_52_8 species=Desulfobacula toluolica genus=Desulfobacula taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Lentisphaerae_52_8 organism_group=Lentisphaerae
Tax=GWF2_Lentisphaerae_52_8_curated
L3_106_000M1_scaffold_2510_10
GWF2_Lentisphaerae_52_8_curated, Lentisphaerae, Bacteria

Not on your lists

comp(14705..15373)
DNA (669bp) protein (223aa)
Two component system response regulator, OmpR family, related to CopR id=4215469 bin=GWF2_Lentisphaerae_52_8 species=Desulfobacula toluolica genus=Desulfobacula taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Lentisphaerae_52_8 organism_group=Lentisphaerae
two component transcriptional regulator (Winged helix family protein)
Tax=GWF2_Lentisphaerae_52_8_curated
L3_106_000M1_scaffold_2510_11
unknown

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15586..15981
DNA (396bp) protein (132aa)

This feature has no annotations

L3_106_000M1_scaffold_2510_12
unknown

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16103..16321
DNA (219bp) protein (73aa)

This feature has no annotations

L3_106_000M1_scaffold_2510_13
Helicobacter pylori, Helicobacter, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

16345..17991
DNA (1647bp) protein (549aa)
Arylsulfatase n=2 Tax=Helicobacter pylori RepID=M3PA92_HELPX
hypothetical protein
Arylsulfatase {ECO:0000313|EMBL:EMH04707.1}; TaxID=1159034 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Helicobacteraceae; Helicobacter.;" source="Helicobacter pylori GAM239Bi.;"
L3_106_000M1_scaffold_2510_14
unknown

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18331..18519
DNA (189bp) protein (63aa)

This feature has no annotations

L3_106_000M1_scaffold_2510_15
unknown

Not on your lists

18607..20103
DNA (1497bp) protein (499aa)

This feature has no annotations

L3_106_000M1_scaffold_2510_16
GWF2_Lentisphaerae_45_14_curated, Lentisphaerae, Bacteria

Not on your lists

comp(20053..21327)
DNA (1275bp) protein (425aa)
Carboxyl-terminal protease id=4137409 bin=GWF2_Lentisphaerae_52_8 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWF2_Lentisphaerae_52_8 organism_group=Lentisphaerae
ctpA; carboxyl-terminal protease
Tax=GWF2_Lentisphaerae_45_14_curated
L3_106_000M1_scaffold_2510_17
GWF2_Lentisphaerae_44_16_curated, Lentisphaerae, Bacteria

Not on your lists

21460..23109
DNA (1650bp) protein (550aa)
pyrophosphate-dependent phosphofructokinase (EC:2.7.1.90)
Diphosphate--fructose-6-phosphate 1-phosphotransferase id=1872174 bin=GWD2_RBX1-related_39_127 species=Tannerella sp. 6_1_58FAA_CT1 genus=Tannerella taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
Tax=GWF2_Lentisphaerae_44_16_curated
L3_106_000M1_scaffold_2510_18
GWF2_Lentisphaerae_44_16_curated, Lentisphaerae, Bacteria

Not on your lists

23124..23429
DNA (306bp) protein (102aa)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C id=4427483 bin=GWF2_Lentisphaerae_50_93 species=Clostridium clariflavum genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
aspartyl/glutamyl-tRNA amidotransferase subunit C
Tax=GWF2_Lentisphaerae_44_16_curated
L3_106_000M1_scaffold_2510_19
GWF2_Lentisphaerae_44_16_curated, Lentisphaerae, Bacteria

Not on your lists

23432..24880
DNA (1449bp) protein (483aa)
Glutamyl-tRNA(Gln) amidotransferase subunit A id=4072131 bin=GWF2_Lentisphaerae_52_8 species=unknown genus=Chloroflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWF2_Lentisphaerae_52_8 organism_group=Lentisphaerae
gatA; aspartyl/glutamyl-tRNA amidotransferase subunit A
Tax=GWF2_Lentisphaerae_44_16_curated
Displaying 19 items

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