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L3_106_000M1_scaffold_2754

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_106_000M1_scaffold_2754_1
unknown

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1..1611
DNA (1611bp) protein (537aa)

This feature has no annotations

L3_106_000M1_scaffold_2754_2
unknown

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comp(1928..2140)
DNA (213bp) protein (71aa)

This feature has no annotations

L3_106_000M1_scaffold_2754_3
GWF2_Lentisphaerae_44_16_curated, Lentisphaerae, Bacteria

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2156..2875
DNA (720bp) protein (240aa)
Putative uncharacterized protein id=4172499 bin=GWF2_Lentisphaerae_50_93 species=Planctomyces maris genus=Planctomyces taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
N-terminal cleavage protein
Tax=GWF2_Lentisphaerae_44_16_curated
L3_106_000M1_scaffold_2754_4
RIFOXYB12_FULL_Lentisphaerae_65_16_curated, Lentisphaerae, Bacteria

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2888..4393
DNA (1506bp) protein (502aa)
Glycoside hydrolase family 5 id=4357656 bin=GWF2_Lentisphaerae_50_93 species=Opitutaceae bacterium TAV5 genus=unknown taxon_order=unknown taxon_class=Opitutae phylum=Verrucomicrobia tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
endoglucanase
Tax=RIFOXYB12_FULL_Lentisphaerae_65_16_curated
L3_106_000M1_scaffold_2754_5
Rhodopirellula baltica, Rhodopirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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comp(4412..5596)
DNA (1185bp) protein (395aa)
Protein containing planctomycete cytochrome C domain protein (Fragment) n=1 Tax=Rhodopirellula baltica SH28 RepID=K5C8L0_RHOBT
Protein containing planctomycete cytochrome C domain protein {ECO:0000313|EMBL:EKJ99359.1}; Flags: Fragment;; TaxID=993517 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula.;" source="Rhodopirellula baltica SH28.;"
hypothetical protein
L3_106_000M1_scaffold_2754_6
Pseudopedobacter saltans, Pseudopedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(5598..6659)
DNA (1062bp) protein (354aa)
Metallophosphoesterase n=1 Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0SF09_PEDSD
metallophosphoesterase
Metallophosphoesterase {ECO:0000313|EMBL:ADY54077.1}; Flags: Precursor;; TaxID=762903 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pseudopedobacter.;" source="Pseudopedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 /; LMG 10337 / NBRC 100064 / NCIMB 13643) (Pedobacter saltans).;"
L3_106_000M1_scaffold_2754_7
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(6672..7430)
DNA (759bp) protein (253aa)
Type II secretory pathway pseudopilin PulG-like protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XAL9_9BACT
Type II secretory pathway pseudopilin PulG-like protein {ECO:0000313|EMBL:EEF63054.1}; Flags: Precursor;; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
prepilin-type N-terminal cleavage/methylation domain
L3_106_000M1_scaffold_2754_8
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

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comp(7505..9790)
DNA (2286bp) protein (762aa)
Glycosyl hydrolase family 2, sugar binding domain protein id=3056975 bin=GWF2_Lentisphaerae_50_93 species=unknown genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
beta-galactosidase/beta-glucuronidase
Tax=GWF2_Lentisphaerae_50_93_curated
L3_106_000M1_scaffold_2754_9
GWF2_Lentisphaerae_45_14_curated, Lentisphaerae, Bacteria

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9956..10975
DNA (1020bp) protein (340aa)
Transcriptional regulator n=1 Tax=Opitutaceae bacterium TAV1 RepID=I6ARW9_9BACT
alanine racemase
Tax=GWF2_Lentisphaerae_45_14_curated
L3_106_000M1_scaffold_2754_10
GWF2_Lentisphaerae_49_21_curated, Lentisphaerae, Bacteria

Not on your lists

comp(11107..12903)
DNA (1797bp) protein (599aa)
Uncharacterized protein id=4437108 bin=GWF2_Lentisphaerae_49_21 species=Bacteroides nordii genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Lentisphaerae_49_21 organism_group=Lentisphaerae organism_desc=Very large genome: good +
putative exported glycosylhydrolase
Tax=GWF2_Lentisphaerae_49_21_curated
L3_106_000M1_scaffold_2754_11
Rhodopirellula sp. SWK7, Rhodopirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(13045..14202)
DNA (1158bp) protein (386aa)
Xylose operon regulatory protein n=1 Tax=Rhodopirellula sp. SWK7 RepID=M5SZ03_9PLAN
Xylose operon regulatory protein {ECO:0000313|EMBL:EMI42202.1}; TaxID=595460 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula.;" source="Rhodopirellula sp. SWK7.;"
AraC family transcriptional regulator
L3_106_000M1_scaffold_2754_12
RIFOXYB12_FULL_Lentisphaerae_65_16_curated, Lentisphaerae, Bacteria

Not on your lists

14419..15123
DNA (705bp) protein (235aa)
hypothetical protein n=1 Tax=Verrucomicrobia bacterium SCGC AAA164-N20 RepID=UPI000376CCF1
N-terminal cleavage protein
Tax=RIFOXYB12_FULL_Lentisphaerae_65_16_curated
L3_106_000M1_scaffold_2754_13
RIFOXYB12_FULL_Lentisphaerae_65_16_curated, Lentisphaerae, Bacteria

Not on your lists

15137..18916
DNA (3780bp) protein (1260aa)
Glycoside hydrolase family 2 sugar binding protein id=2851544 bin=GWF2_Lentisphaerae_49_21 species=unknown genus=unknown taxon_order=Oscillatoriales taxon_class=unknown phylum=Cyanobacteria tax=GWF2_Lentisphaerae_49_21 organism_group=Lentisphaerae organism_desc=Very large genome: good +
glycoside hydrolase family 2 sugar binding protein
Tax=RIFOXYB12_FULL_Lentisphaerae_65_16_curated
L3_106_000M1_scaffold_2754_14
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

18956..19897
DNA (942bp) protein (314aa)
Glycoside hydrolase family 2 sugar binding protein id=3761829 bin=GWF2_Lentisphaerae_50_93 species=unknown genus=unknown taxon_order=Oscillatoriales taxon_class=unknown phylum=Cyanobacteria tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
Tax=GWF2_Lentisphaerae_50_93_curated
L3_106_000M1_scaffold_2754_15
GWC2_Clostridiales_40_7_curated, Clostridiales, Bacteria

Not on your lists

20462..21334
DNA (873bp) protein (291aa)
Xylose isomerase domain protein TIM barrel id=4577124 bin=GWC2_Clostridiales_40_7 species=unknown genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Clostridiales_40_7 organism_group=Firmicute
xylose isomerase
Tax=GWC2_Clostridiales_40_7_curated
L3_106_000M1_scaffold_2754_16
Lentisphaera araneosa, Lentisphaera, Lentisphaerales, Lentisphaeria, Lentisphaerae, Bacteria

Not on your lists

21348..22709
DNA (1362bp) protein (454aa)
Beta-glucosidase {ECO:0000256|RuleBase:RU361175}; EC=3.2.1.21 {ECO:0000256|RuleBase:RU361175};; TaxID=313628 species="Bacteria; Lentisphaerae; Lentisphaeria; Lentisphaerales; Lentisphaeraceae; Lentisphaera.;" source="Lentisphaera araneosa HTCC2155.;"
TonB-like protein n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DLV2_9BACT
beta-galactosidase
L3_106_000M1_scaffold_2754_17
Coraliomargarita sp. CAG:312, Coraliomargarita, Puniceicoccales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(22776..23159)
DNA (384bp) protein (128aa)
Uncharacterized protein n=1 Tax=Coraliomargarita sp. CAG:312 RepID=R7L6F8_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDE84254.1}; TaxID=1262865 species="Bacteria; Verrucomicrobia; Opitutae; Puniceicoccales; Puniceicoccaceae; Coraliomargarita; environmental samples.;" source="Coraliomargarita sp. CAG:312.;"
hypothetical protein
Displaying 17 items

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