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L3_106_000M1_scaffold_3065

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_106_000M1_scaffold_3065_1
GWA2_Deltaproteobacteria_55_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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2..169
DNA (168bp) protein (56aa)
GDP-L-fucose synthase n=1 Tax=Verrucomicrobia bacterium SCGC AAA300-K03 RepID=UPI00036CC1DA
NAD-dependent epimerase/dehydratase
Tax=GWA2_Deltaproteobacteria_55_10_curated
L3_106_000M1_scaffold_3065_2
Paenibacillus sp. VKM B-2647, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(992..2323)
DNA (1332bp) protein (444aa)
alpha-galactosidase (EC:3.2.1.22)
Alpha-mannosidase {ECO:0000313|EMBL:KIL40995.1}; TaxID=1590651 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. VKM B-2647.;"
Alpha-galactosidase (Melibiase) id=4129769 bin=GWF2_Clostridiales_36_10 species=Treponema azotonutricium genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWF2_Clostridiales_36_10 organism_group=Firmicute
L3_106_000M1_scaffold_3065_3
Opitutaceae bacterium TAV5, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(2529..4856)
DNA (2328bp) protein (776aa)
Cellulase (Glycosyl hydrolase family 5) n=2 Tax=unclassified Opitutaceae RepID=I6ASM2_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHF91154.1}; TaxID=794903 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV5.;"
L3_106_000M1_scaffold_3065_4
RIFOXYB12_FULL_Lentisphaerae_65_16_curated, Lentisphaerae, Bacteria

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comp(4882..5559)
DNA (678bp) protein (226aa)
Prepilin-type N-terminal cleavage/methylation domain n=1 Tax=Chthonomonas calidirosea T49 RepID=S0EXB3_9BACT
prepilin-type N-terminal cleavage/methylation domain
Tax=RIFOXYB12_FULL_Lentisphaerae_65_16_curated
L3_106_000M1_scaffold_3065_5
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

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comp(5563..6636)
DNA (1074bp) protein (358aa)
Alanine racemase id=4489727 bin=GWF2_Lentisphaerae_50_93 species=Caldicellulosiruptor saccharolyticus genus=Caldicellulosiruptor taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
LacI family transcriptional regulator
Tax=GWF2_Lentisphaerae_50_93_curated
L3_106_000M1_scaffold_3065_6
GWF2_Lentisphaerae_49_21_curated, Lentisphaerae, Bacteria

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6865..7485
DNA (621bp) protein (207aa)
Putative uncharacterized protein id=2709126 bin=GWF2_Lentisphaerae_49_21 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWF2_Lentisphaerae_49_21 organism_group=Lentisphaerae organism_desc=Very large genome: good +
N-terminal cleavage protein
Tax=GWF2_Lentisphaerae_49_21_curated
L3_106_000M1_scaffold_3065_7
GWF2_Lentisphaerae_49_21_curated, Lentisphaerae, Bacteria

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7508..8257
DNA (750bp) protein (250aa)
Radical sam domain protein id=2709288 bin=GWF2_Lentisphaerae_49_21 species=Methanobacterium formicicum genus=Methanobacterium taxon_order=Methanobacteriales taxon_class=Methanobacteria phylum=Euryarchaeota tax=GWF2_Lentisphaerae_49_21 organism_group=Lentisphaerae organism_desc=Very large genome: good +
radical SAM domain-containing protein
Tax=GWF2_Lentisphaerae_49_21_curated
L3_106_000M1_scaffold_3065_8
GWF2_Lentisphaerae_45_14_curated, Lentisphaerae, Bacteria

Not on your lists

comp(8668..10152)
DNA (1485bp) protein (495aa)
glucose-6-phosphate 1-dehydrogenase (EC:1.1.1.49)
Glucose-6-phosphate 1-dehydrogenase id=4201189 bin=GWF2_Lentisphaerae_52_8 species=Acetonema longum genus=Acetonema taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWF2_Lentisphaerae_52_8 organism_group=Lentisphaerae
Tax=GWF2_Lentisphaerae_45_14_curated
L3_106_000M1_scaffold_3065_9
Desulfovibrio sp. FW1012B, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(10170..10952)
DNA (783bp) protein (261aa)
ABC transporter ATP-binding protein n=1 Tax=Salmonella enterica subsp. enterica serovar Enteritidis str. SARB17 RepID=L6YA53_SALEN
Uncharacterized protein {ECO:0000313|EMBL:EHJ47364.1}; TaxID=644968 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. FW1012B.;"
pstS; phosphate ABC transporter substrate-binding protein
L3_106_000M1_scaffold_3065_10
GWF2_Lentisphaerae_52_8_curated, Lentisphaerae, Bacteria

Not on your lists

comp(10949..12433)
DNA (1485bp) protein (495aa)
Beta-galactosidase id=2825187 bin=GWF2_Lentisphaerae_52_8 species=unknown genus=unknown taxon_order=unknown taxon_class=Opitutae phylum=Verrucomicrobia tax=GWF2_Lentisphaerae_52_8 organism_group=Lentisphaerae
beta-galactosidase
Tax=GWF2_Lentisphaerae_52_8_curated
L3_106_000M1_scaffold_3065_11
Opitutaceae bacterium TAV5, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

12712..13203
DNA (492bp) protein (164aa)
Putative uncharacterized protein n=1 Tax=Opitutaceae bacterium TAV5 RepID=H1IYR4_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHF94113.1}; TaxID=794903 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV5.;"
L3_106_000M1_scaffold_3065_12
GWF2_Lentisphaerae_52_8_curated, Lentisphaerae, Bacteria

Not on your lists

comp(13252..15075)
DNA (1824bp) protein (608aa)
Type IV pilus biogenesis protein PilQ id=3212583 bin=GWF2_Lentisphaerae_52_8 species=Colwellia psychrerythraea genus=Colwellia taxon_order=Alteromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF2_Lentisphaerae_52_8 organism_group=Lentisphaerae
type II secretory pathway, component EpsD
Tax=GWF2_Lentisphaerae_52_8_curated
L3_106_000M1_scaffold_3065_13
GWF2_Lentisphaerae_44_16_curated, Lentisphaerae, Bacteria

Not on your lists

comp(15097..16503)
DNA (1407bp) protein (469aa)
General secretion pathway protein D id=3896334 bin=GWF2_Lentisphaerae_52_8 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Lentisphaerae_52_8 organism_group=Lentisphaerae
Tax=GWF2_Lentisphaerae_44_16_curated
L3_106_000M1_scaffold_3065_14
uncultured Desulfobacterium sp., Desulfobacterium, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16632..17804)
DNA (1173bp) protein (391aa)
Putative uncharacterized protein n=1 Tax=uncultured Desulfobacterium sp. RepID=E1YG16_9DELT
Putative uncharacterized protein {ECO:0000313|EMBL:CBX29510.1}; TaxID=201089 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfobacterium; environmental samples.;" source="uncultured Desulfobacterium sp.;"
osmosensitive K channel His kinase sensor
L3_106_000M1_scaffold_3065_15
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17881..18444)
DNA (564bp) protein (188aa)
Potassium-transporting ATPase C chain {ECO:0000256|HAMAP-Rule:MF_00276}; EC=3.6.3.12 {ECO:0000256|HAMAP-Rule:MF_00276};; ATP phosphohydrolase [potassium-transporting] C chain {ECO:0000256|HAMAP-Rule:MF_00276}; Potassium-binding and translocating subunit C {ECO:0000256|HAMAP-Rule:MF_00276}; Potassium-translocating ATPase C chain {ECO:0000256|HAMAP-Rule:MF_00276}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
Potassium-transporting ATPase C chain n=1 Tax=Nitratireductor indicus C115 RepID=K2PQ98_9RHIZ
potassium-transporting ATPase
L3_106_000M1_scaffold_3065_16
uncultured Desulfobacterium sp., Desulfobacterium, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18463..20520)
DNA (2058bp) protein (686aa)
Potassium-transporting ATPase B chain {ECO:0000256|HAMAP-Rule:MF_00285}; EC=3.6.3.12 {ECO:0000256|HAMAP-Rule:MF_00285};; ATP phosphohydrolase [potassium-transporting] B chain {ECO:0000256|HAMAP-Rule:MF_00285}; Potassium-binding and translocating subunit B {ECO:0000256|HAMAP-Rule:MF_00285}; Potassium-translocating ATPase B chain {ECO:0000256|HAMAP-Rule:MF_00285}; TaxID=201089 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfobacterium; environmental samples.;" source="uncultured Desulfobacterium sp.;"
Potassium-transporting ATPase B chain n=1 Tax=uncultured Desulfobacterium sp. RepID=E1YG19_9DELT
K+-transporting ATPase subunit B
L3_106_000M1_scaffold_3065_17
Chlorobium ferrooxidans, Chlorobium, Chlorobiales, Chlorobia, Chlorobi, Bacteria

Not on your lists

comp(20539..20805)
DNA (267bp) protein (89aa)
Potassium-transporting ATPase A chain {ECO:0000256|HAMAP-Rule:MF_00275}; EC=3.6.3.12 {ECO:0000256|HAMAP-Rule:MF_00275};; ATP phosphohydrolase [potassium-transporting] A chain {ECO:0000256|HAMAP-Rule:MF_00275}; Potassium-binding and translocating subunit A {ECO:0000256|HAMAP-Rule:MF_00275}; Potassium-translocating ATPase A chain {ECO:0000256|HAMAP-Rule:MF_00275}; TaxID=377431 species="Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae; Chlorobium/Pelodictyon group; Chlorobium.;" source="Chlorobium ferrooxidans DSM 13031.;"
potassium-transporting ATPase subunit A (EC:3.6.3.12)
Potassium-transporting ATPase A chain n=1 Tax=Chlorobium ferrooxidans DSM 13031 PF1_9CHLB">RepID=Q0YPF1_9CHLB
Displaying 17 items

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