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L3_106_000M1_scaffold_3386

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_106_000M1_scaffold_3386_1
GWF2_Lentisphaerae_44_16_curated, Lentisphaerae, Bacteria

Not on your lists

comp(2..667)
DNA (666bp) protein (222aa)
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase id=3822771 bin=GWF2_Lentisphaerae_49_21 species=Lentisphaera araneosa genus=Lentisphaera taxon_order=Lentisphaerales taxon_class=Lentisphaeria phylum=Lentisphaerae tax=GWF2_Lentisphaerae_49_21 organism_group=Lentisphaerae organism_desc=Very large genome: good +
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
Tax=GWF2_Lentisphaerae_44_16_curated
L3_106_000M1_scaffold_3386_2
GWF2_Lentisphaerae_44_16_curated, Lentisphaerae, Bacteria

Not on your lists

comp(687..2084)
DNA (1398bp) protein (466aa)
Dihydrolipoyl dehydrogenase id=2716446 bin=GWF2_Lentisphaerae_52_8 species=Desulfotomaculum hydrothermale genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Lentisphaerae_52_8 organism_group=Lentisphaerae
dihydrolipoamide dehydrogenase
Tax=GWF2_Lentisphaerae_44_16_curated
L3_106_000M1_scaffold_3386_3
GWF2_Lentisphaerae_45_14_curated, Lentisphaerae, Bacteria

Not on your lists


comp(2236..2499)
DNA (264bp) protein (88aa)
30S ribosomal protein S19 id=2823308 bin=GWF2_Lentisphaerae_50_93 species=Opitutus terrae genus=Opitutus taxon_order=unknown taxon_class=Opitutae phylum=Verrucomicrobia tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
rpsS; ribosomal protein S19
Tax=GWF2_Lentisphaerae_45_14_curated
L3_106_000M1_scaffold_3386_4
GWF2_Lentisphaerae_52_8_curated, Lentisphaerae, Bacteria

Not on your lists


comp(2499..3329)
DNA (831bp) protein (277aa)
50S ribosomal protein L2 id=4395153 bin=GWF2_Lentisphaerae_52_8 species=Lentisphaera araneosa genus=Lentisphaera taxon_order=Lentisphaerales taxon_class=Lentisphaeria phylum=Lentisphaerae tax=GWF2_Lentisphaerae_52_8 organism_group=Lentisphaerae
50S ribosomal protein L2
Tax=GWF2_Lentisphaerae_52_8_curated
L3_106_000M1_scaffold_3386_5
GWF2_Lentisphaerae_52_8_curated, Lentisphaerae, Bacteria

Not on your lists


comp(3349..3630)
DNA (282bp) protein (94aa)
50S ribosomal protein L23 id=4395154 bin=GWF2_Lentisphaerae_52_8 species=Finegoldia magna genus=Finegoldia taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Lentisphaerae_52_8 organism_group=Lentisphaerae
50S ribosomal protein L23
Tax=GWF2_Lentisphaerae_52_8_curated
L3_106_000M1_scaffold_3386_6
GWF2_Lentisphaerae_44_16_curated, Lentisphaerae, Bacteria

Not on your lists


comp(3642..4277)
DNA (636bp) protein (212aa)
50S ribosomal protein L4 id=4395155 bin=GWF2_Lentisphaerae_52_8 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWF2_Lentisphaerae_52_8 organism_group=Lentisphaerae
50S ribosomal protein L4, bacterial/organelle
Tax=GWF2_Lentisphaerae_44_16_curated
L3_106_000M1_scaffold_3386_7
GWF2_Lentisphaerae_52_8_curated, Lentisphaerae, Bacteria

Not on your lists


comp(4291..4947)
DNA (657bp) protein (219aa)
50S ribosomal protein L3 id=4395156 bin=GWF2_Lentisphaerae_52_8 species=Lentisphaera araneosa genus=Lentisphaera taxon_order=Lentisphaerales taxon_class=Lentisphaeria phylum=Lentisphaerae tax=GWF2_Lentisphaerae_52_8 organism_group=Lentisphaerae
50S ribosomal protein L3
Tax=GWF2_Lentisphaerae_52_8_curated
L3_106_000M1_scaffold_3386_8
GWF2_Lentisphaerae_44_16_curated, Lentisphaerae, Bacteria

Not on your lists


comp(5027..5350)
DNA (324bp) protein (108aa)
30S ribosomal protein S10 id=4395157 bin=GWF2_Lentisphaerae_52_8 species=Chthoniobacter flavus genus=Chthoniobacter taxon_order=unknown taxon_class=Spartobacteria phylum=Verrucomicrobia tax=GWF2_Lentisphaerae_52_8 organism_group=Lentisphaerae
rpsJ; 30S ribosomal protein S10
Tax=GWF2_Lentisphaerae_44_16_curated
L3_106_000M1_scaffold_3386_9
GWF2_Lentisphaerae_45_14_curated, Lentisphaerae, Bacteria

Not on your lists

comp(5354..7468)
DNA (2115bp) protein (705aa)
Elongation factor G id=4395158 bin=GWF2_Lentisphaerae_52_8 species=Heliobacterium modesticaldum genus=Heliobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Lentisphaerae_52_8 organism_group=Lentisphaerae
translation elongation factor G
Tax=GWF2_Lentisphaerae_45_14_curated
L3_106_000M1_scaffold_3386_10
GWF2_Lentisphaerae_45_14_curated, Lentisphaerae, Bacteria

Not on your lists


comp(7487..7957)
DNA (471bp) protein (157aa)
30S ribosomal protein S7 id=4395159 bin=GWF2_Lentisphaerae_52_8 species=Lentisphaera araneosa genus=Lentisphaera taxon_order=Lentisphaerales taxon_class=Lentisphaeria phylum=Lentisphaerae tax=GWF2_Lentisphaerae_52_8 organism_group=Lentisphaerae
rpsG; 30S ribosomal protein S7
Tax=GWF2_Lentisphaerae_45_14_curated
L3_106_000M1_scaffold_3386_11
GWF2_Lentisphaerae_52_8_curated, Lentisphaerae, Bacteria

Not on your lists


comp(7998..8402)
DNA (405bp) protein (135aa)
30S ribosomal protein S12 id=4395160 bin=GWF2_Lentisphaerae_52_8 species=Akkermansia muciniphila genus=Akkermansia taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWF2_Lentisphaerae_52_8 organism_group=Lentisphaerae
rpsL; 30S ribosomal protein S12
Tax=GWF2_Lentisphaerae_52_8_curated
L3_106_000M1_scaffold_3386_12
GWF2_Lentisphaerae_44_16_curated, Lentisphaerae, Bacteria

Not on your lists

comp(8594..12991)
DNA (4398bp) protein (1466aa)
DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta' id=2823335 bin=GWF2_Lentisphaerae_50_93 species=Chthoniobacter flavus genus=Chthoniobacter taxon_order=unknown taxon_class=Spartobacteria phylum=Verrucomicrobia tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
Tax=GWF2_Lentisphaerae_44_16_curated
L3_106_000M1_scaffold_3386_13
GWF2_Lentisphaerae_45_14_curated, Lentisphaerae, Bacteria

Not on your lists

comp(13010..16831)
DNA (3822bp) protein (1274aa)
DNA-directed RNA polymerase subunit beta id=2823336 bin=GWF2_Lentisphaerae_50_93 species=unknown genus=unknown taxon_order=unknown taxon_class=Opitutae phylum=Verrucomicrobia tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
rpoB; DNA-directed RNA polymerase subunit beta
Tax=GWF2_Lentisphaerae_45_14_curated
L3_106_000M1_scaffold_3386_14
Desulfurispirillum indicum, Desulfurispirillum, Chrysiogenales, Chrysiogenetes, Chrysiogenetes, Bacteria

Not on your lists


comp(17196..17585)
DNA (390bp) protein (130aa)
50S ribosomal protein L7/L12 n=1 Tax=Desulfurispirillum indicum (strain ATCC BAA-1389 / S5) RepID=E6W245_DESIS
50S ribosomal protein L7/L12
50S ribosomal protein L7/L12 {ECO:0000256|HAMAP-Rule:MF_00368}; TaxID=653733 species="Bacteria; Chrysiogenetes; Chrysiogenales; Chrysiogenaceae; Desulfurispirillum.;" source="Desulfurispirillum indicum (strain ATCC BAA-1389 / S5).;"
L3_106_000M1_scaffold_3386_15
GWF2_Lentisphaerae_45_14_curated, Lentisphaerae, Bacteria

Not on your lists


comp(17615..18136)
DNA (522bp) protein (174aa)
ribosomal protein L10 id=3795736 bin=GWF2_Lentisphaerae_38_69 species=Verrucomicrobium spinosum genus=Verrucomicrobium taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWF2_Lentisphaerae_38_69 organism_group=Lentisphaerae organism_desc=a349
50S ribosomal protein L10
Tax=GWF2_Lentisphaerae_45_14_curated
L3_106_000M1_scaffold_3386_16
GWF2_Lentisphaerae_45_14_curated, Lentisphaerae, Bacteria

Not on your lists


comp(18133..18840)
DNA (708bp) protein (236aa)
50S ribosomal protein L1 id=3386350 bin=GWF2_Lentisphaerae_52_8 species=Lentisphaera araneosa genus=Lentisphaera taxon_order=Lentisphaerales taxon_class=Lentisphaeria phylum=Lentisphaerae tax=GWF2_Lentisphaerae_52_8 organism_group=Lentisphaerae
rplA; 50S ribosomal protein L1
Tax=GWF2_Lentisphaerae_45_14_curated
L3_106_000M1_scaffold_3386_17
GWF2_Lentisphaerae_44_16_curated, Lentisphaerae, Bacteria

Not on your lists


comp(18833..18961)
DNA (129bp) protein (43aa)
50S ribosomal protein L11 id=3386351 bin=GWF2_Lentisphaerae_52_8 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWF2_Lentisphaerae_52_8 organism_group=Lentisphaerae
rplK; 50S ribosomal protein L11
Tax=GWF2_Lentisphaerae_44_16_curated
Displaying 17 items

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