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L3_106_000M1_scaffold_3403

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_106_000M1_scaffold_3403_1
unknown

Not on your lists

comp(29..1819)
DNA (1791bp) protein (597aa)

This feature has no annotations

L3_106_000M1_scaffold_3403_2
GWF2_Lentisphaerae_45_14_curated, Lentisphaerae, Bacteria

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1960..3255
DNA (1296bp) protein (432aa)
diphosphate--fructose-6-phosphate 1-phosphotransferase (EC:2.7.1.11)
6-phosphofructokinase id=3761843 bin=GWF2_Lentisphaerae_50_93 species=Fibrobacter succinogenes genus=Fibrobacter taxon_order=Fibrobacterales taxon_class=Fibrobacteria phylum=Fibrobacteres tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
Tax=GWF2_Lentisphaerae_45_14_curated
L3_106_000M1_scaffold_3403_3
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

3268..4335
DNA (1068bp) protein (356aa)
Geranylgeranyl pyrophosphate synthetase id=3268123 bin=GWF2_Lentisphaerae_50_93 species=Lentisphaera araneosa genus=Lentisphaera taxon_order=Lentisphaerales taxon_class=Lentisphaeria phylum=Lentisphaerae tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
polyprenyl synthetase
Tax=GWF2_Lentisphaerae_50_93_curated
L3_106_000M1_scaffold_3403_4
GWF2_Lentisphaerae_49_21_curated, Lentisphaerae, Bacteria

Not on your lists

comp(4389..5381)
DNA (993bp) protein (331aa)
Putative uncharacterized protein id=2851318 bin=GWF2_Lentisphaerae_49_21 species=Subdoligranulum sp. 4_3_54A2FAA genus=Subdoligranulum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Lentisphaerae_49_21 organism_group=Lentisphaerae organism_desc=Very large genome: good +
hypothetical protein
Tax=GWF2_Lentisphaerae_49_21_curated
L3_106_000M1_scaffold_3403_5
GWF2_Lentisphaerae_52_8_curated, Lentisphaerae, Bacteria

Not on your lists

comp(5392..6336)
DNA (945bp) protein (315aa)
id=3471388 bin=GWF2_Lentisphaerae_52_8 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Lentisphaerae_52_8 organism_group=Lentisphaerae
Tax=GWF2_Lentisphaerae_52_8_curated
L3_106_000M1_scaffold_3403_6
GWF2_Lentisphaerae_45_14_curated, Lentisphaerae, Bacteria

Not on your lists

6493..7404
DNA (912bp) protein (304aa)
Electron transfer flavoprotein alpha/beta-subunit id=2596918 bin=GWF2_Lentisphaerae_52_8 species=Caldithrix abyssi genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Lentisphaerae_52_8 organism_group=Lentisphaerae
electron transfer flavoprotein subunit beta
Tax=GWF2_Lentisphaerae_45_14_curated
L3_106_000M1_scaffold_3403_7
GWF2_Lentisphaerae_45_14_curated, Lentisphaerae, Bacteria

Not on your lists

7413..8435
DNA (1023bp) protein (341aa)
electron transfer flavoprotein alpha subunit id=2596920 bin=GWF2_Lentisphaerae_52_8 species=ACD39 genus=ACD39 taxon_order=ACD39 taxon_class=ACD39 phylum=unknown tax=GWF2_Lentisphaerae_52_8 organism_group=Lentisphaerae
Electron transfer flavoprotein, alpha subunit
Tax=GWF2_Lentisphaerae_45_14_curated
L3_106_000M1_scaffold_3403_8
GWF2_Lentisphaerae_45_14_curated, Lentisphaerae, Bacteria

Not on your lists

8454..10172
DNA (1719bp) protein (573aa)
Acyl-CoA dehydrogenase domain-containing protein id=2596922 bin=GWF2_Lentisphaerae_52_8 species=ACD79 genus=ACD79 taxon_order=ACD79 taxon_class=ACD79 phylum=Clamydiae tax=GWF2_Lentisphaerae_52_8 organism_group=Lentisphaerae
acyl-CoA dehydrogenase
Tax=GWF2_Lentisphaerae_45_14_curated
L3_106_000M1_scaffold_3403_9
GWF2_Lentisphaerae_45_14_curated, Lentisphaerae, Bacteria

Not on your lists

10257..10523
DNA (267bp) protein (89aa)
id=2596926 bin=GWF2_Lentisphaerae_52_8 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Lentisphaerae_52_8 organism_group=Lentisphaerae
Tax=GWF2_Lentisphaerae_45_14_curated
L3_106_000M1_scaffold_3403_10
GWF2_Lentisphaerae_44_16_curated, Lentisphaerae, Bacteria

Not on your lists

10533..11045
DNA (513bp) protein (171aa)
phosphoribosylamine/glycine ligase (EC:4.1.1.21 6.3.4.13)
N5-carboxyaminoimidazole ribonucleotide mutase id=2597096 bin=GWF2_Lentisphaerae_52_8 species=Ruminococcaceae bacterium D16 genus=unknown taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Lentisphaerae_52_8 organism_group=Lentisphaerae
Tax=GWF2_Lentisphaerae_44_16_curated
L3_106_000M1_scaffold_3403_11
Desulfovibrio desulfuricans, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11068..11679
DNA (612bp) protein (204aa)
Multiple antibiotic resistance (MarC)-related protein n=1 Tax=Desulfovibrio desulfuricans ND132 RepID=F0JE47_DESDE
multiple antibiotic resistance (MarC)-like protein
UPF0056 membrane protein {ECO:0000256|RuleBase:RU362048}; Flags: Precursor;; TaxID=641491 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio desulfuricans ND132.;"
L3_106_000M1_scaffold_3403_12
RifOxyA12_full_Lentisphaerae_48_11_curated, Lentisphaerae, Bacteria

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11676..12449
DNA (774bp) protein (258aa)
D-aminopeptidase superfamily protein id=2851315 bin=GWF2_Lentisphaerae_49_21 species=Caldanaerobacter subterraneus genus=Caldanaerobacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Lentisphaerae_49_21 organism_group=Lentisphaerae organism_desc=Very large genome: good +
peptidase M55 D-aminopeptidase
Tax=RifOxyA12_full_Lentisphaerae_48_11_curated
L3_106_000M1_scaffold_3403_13
GWF2_Lentisphaerae_44_16_curated, Lentisphaerae, Bacteria

Not on your lists

12586..13005
DNA (420bp) protein (140aa)
Putative anti-sigma regulatory factor, serine/threonine protein kinase id=3967177 bin=GWF2_Planctomycetes_42_9 species=Desulfatibacillum alkenivorans genus=Desulfatibacillum taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Planctomycetes_42_9 organism_group=Planctomycetes
anti-sigma regulatory factor, serine/threonine protein kinase
Tax=GWF2_Lentisphaerae_44_16_curated
L3_106_000M1_scaffold_3403_14
Novosphingobium sp. PP1Y, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13012..13347
DNA (336bp) protein (112aa)
Anti-sigma factor antagonist n=1 Tax=Novosphingobium sp. PP1Y RepID=F6IN50_9SPHN
anti-sigma-factor antagonist
Anti-sigma factor antagonist {ECO:0000256|RuleBase:RU003749}; TaxID=702113 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. PP1Y.;"
L3_106_000M1_scaffold_3403_15
Desulfomonile tiedjei, Desulfomonile, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13367..13630
DNA (264bp) protein (88aa)
Coenzyme PQQ synthesis protein D (PqqD) n=1 Tax=Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1) RepID=I4CCM0_DESTA
Coenzyme PQQ synthesis protein D (PqqD)
Coenzyme PQQ synthesis protein D (PqqD) {ECO:0000313|EMBL:AFM27311.1}; TaxID=706587 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Desulfomonile.;" source="Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1).;"
L3_106_000M1_scaffold_3403_16
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13679..16234
DNA (2556bp) protein (852aa)
peptidase C39 n=1 Tax=Rhizobium sp. 42MFCr.1 RepID=UPI00036EAB34
ABC transporter ATP-binding protein
ABC transporter ATP-binding protein {ECO:0000313|EMBL:AGS21218.1}; TaxID=1328306 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli bv. mimosae str. Mim1.;"
L3_106_000M1_scaffold_3403_17
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16231..17562
DNA (1332bp) protein (444aa)
Type I secretion membrane fusion protein, HlyD n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QJ04_NITHX
Type I secretion membrane fusion protein, HlyD
Type I secretion membrane fusion protein, HlyD {ECO:0000313|EMBL:ABE63793.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
L3_106_000M1_scaffold_3403_18
GWF2_Lentisphaerae_52_8_curated, Lentisphaerae, Bacteria

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17660..18805
DNA (1146bp) protein (382aa)
N-acetylglucosamine-6-phosphate deacetylase id=4574929 bin=GWF2_Lentisphaerae_52_8 species=Lentisphaera araneosa genus=Lentisphaera taxon_order=Lentisphaerales taxon_class=Lentisphaeria phylum=Lentisphaerae tax=GWF2_Lentisphaerae_52_8 organism_group=Lentisphaerae
nagA; N-acetylglucosamine-6-phosphate deacetylase
Tax=GWF2_Lentisphaerae_52_8_curated
Displaying 18 items

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