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L3_106_000M1_scaffold_4051

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_106_000M1_scaffold_4051_1
Alistipes sp. CAG:53, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(1..162)
DNA (162bp) protein (54aa)
acetylornithine deacetylase/succinyldiaminopimelate desuccinylase-like deacylase n=1 Tax=Alistipes sp. JC136 RepID=UPI00028A0BEA
Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases
Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases {ECO:0000313|EMBL:CCZ96138.1}; TaxID=1262697 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:53.;"
L3_106_000M1_scaffold_4051_2
Alistipes sp. CAG:53, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(167..610)
DNA (444bp) protein (148aa)
hypothetical protein n=1 Tax=Alistipes senegalensis RepID=UPI00031EEE35
Putative lipoprotein NlpE involved in copper resistance {ECO:0000313|EMBL:CCZ96139.1}; TaxID=1262697 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:53.;"
lipoprotein NlpE
L3_106_000M1_scaffold_4051_3
Alistipes sp. CAG:53, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(622..2010)
DNA (1389bp) protein (463aa)
Phosphomannomutase (EC:5.4.2.8)
phosphoglucosamine mutase n=1 Tax=Alistipes senegalensis RepID=UPI0002FAFCF6
Phosphomannomutase {ECO:0000313|EMBL:CCZ96140.1}; TaxID=1262697 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:53.;"
L3_106_000M1_scaffold_4051_4
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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2126..3004
DNA (879bp) protein (293aa)
Uridine phosphorylase (EC:2.4.2.3)
Uridine phosphorylase {ECO:0000313|EMBL:CBK63150.1}; EC=2.4.2.3 {ECO:0000313|EMBL:CBK63150.1};; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
phosphorylase n=1 Tax=Alistipes senegalensis RepID=UPI0002EAF641
L3_106_000M1_scaffold_4051_5
Alistipes sp. CAG:53, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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3038..4162
DNA (1125bp) protein (375aa)
DNA polymerase III, beta subunit (EC:2.7.7.7)
DNA polymerase III subunit beta {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018186}; EC=2.7.7.7 {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018259};; TaxID=1262697 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:53.;"
DNA polymerase III subunit beta n=1 Tax=Alistipes senegalensis RepID=UPI0003145AC5
L3_106_000M1_scaffold_4051_6
Alistipes sp. CAG:53, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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4173..4940
DNA (768bp) protein (256aa)
DNA polymerase III, epsilon subunit and related 3'-5' exonucleases (EC:2.7.7.7)
DNA polymerase III subunit epsilon n=1 Tax=Alistipes senegalensis RepID=UPI0002E3386E
DNA polymerase III epsilon subunit and related 3'-5' exonucleases {ECO:0000313|EMBL:CCZ96143.1}; TaxID=1262697 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:53.;"
L3_106_000M1_scaffold_4051_7
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4937..6763
DNA (1827bp) protein (609aa)
transcriptional regulator n=1 Tax=Alistipes senegalensis RepID=UPI0002DD6E4F
ABC-type branched-chain amino acid transport systems, periplasmic component
ABC-type branched-chain amino acid transport systems, periplasmic component {ECO:0000313|EMBL:CBK63153.1}; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
L3_106_000M1_scaffold_4051_8
Alistipes sp. CAG:53, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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6771..7424
DNA (654bp) protein (218aa)
DNA-binding protein n=1 Tax=Alistipes senegalensis RepID=UPI0003788197
Redox-sensing transcriptional repressor Rex {ECO:0000256|HAMAP-Rule:MF_01131}; TaxID=1262697 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:53.;"
AT-rich DNA-binding protein
L3_106_000M1_scaffold_4051_9
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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7417..8001
DNA (585bp) protein (195aa)
FAD synthase n=1 Tax=Alistipes senegalensis RepID=UPI0002FC7382
FAD synthase
FAD synthase {ECO:0000313|EMBL:CBK63154.1}; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
L3_106_000M1_scaffold_4051_10
Alistipes sp. CAG:53, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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8056..8469
DNA (414bp) protein (138aa)
Acyl-CoA thioester hydrolase YbgC/YbaW family n=1 Tax=Alistipes sp. CAG:53 RepID=R5WUJ0_9BACT
Acyl-CoA thioester hydrolase YbgC/YbaW family {ECO:0000313|EMBL:CCZ96147.1}; TaxID=1262697 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:53.;"
YbgC/YbaW family acyl-CoA thioester hydrolase
L3_106_000M1_scaffold_4051_11
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(8589..10649)
DNA (2061bp) protein (687aa)
heat shock protein Hsp90 n=1 Tax=Alistipes senegalensis RepID=UPI00037DB14D
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein {ECO:0000313|EMBL:CCZ76612.1}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
molecular chaperone of HSP90 family
L3_106_000M1_scaffold_4051_12
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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10872..11399
DNA (528bp) protein (176aa)
nitroreductase n=1 Tax=Alistipes senegalensis RepID=UPI0002E2B55E
Nitroreductase
Nitroreductase {ECO:0000313|EMBL:CBK63157.1}; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
L3_106_000M1_scaffold_4051_13
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11440..12432)
DNA (993bp) protein (331aa)
aldose 1-epimerase n=1 Tax=Alistipes senegalensis RepID=UPI0002E7B150
galactose mutarotase
Galactose mutarotase-like enzyme {ECO:0000313|EMBL:CCZ75483.1}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
L3_106_000M1_scaffold_4051_14
Alistipes sp. CAG:53, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12435..12749)
DNA (315bp) protein (105aa)
thioredoxin n=1 Tax=Alistipes senegalensis RepID=UPI0002F010C6
Thioredoxin {ECO:0000256|PIRNR:PIRNR000077}; TaxID=1262697 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:53.;"
thioredoxin
L3_106_000M1_scaffold_4051_15
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12793..15558)
DNA (2766bp) protein (922aa)
DNA-directed DNA polymerase {ECO:0000256|SAAS:SAAS00057170}; EC=2.7.7.7 {ECO:0000256|SAAS:SAAS00057170, ECO:0000313|EMBL:CBK63159.1};; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
DNA polymerase III, alpha subunit (EC:2.7.7.7)
DNA polymerase III subunit alpha n=1 Tax=Alistipes senegalensis RepID=UPI0002EC82B9
Displaying 15 items

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