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L3_106_000M1_scaffold_2620

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Displaying 19 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_106_000M1_scaffold_2620_1
Alistipes sp. CAG:268, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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2..337
DNA (336bp) protein (112aa)
hypothetical protein n=1 Tax=Alistipes senegalensis RepID=UPI0002F37039
Uncharacterized protein {ECO:0000313|EMBL:CDC96553.1}; TaxID=1262693 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:268.;"
hypothetical protein
L3_106_000M1_scaffold_2620_2
Alistipes sp. CAG:53, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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502..2037
DNA (1536bp) protein (512aa)
Glutamate--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00022}; EC=6.1.1.17 {ECO:0000256|HAMAP-Rule:MF_00022};; Glutamyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00022}; TaxID=1262697 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:53.;"
glutamyl-tRNA synthetase n=1 Tax=Alistipes senegalensis RepID=UPI000361134F
glutamyl-tRNA synthetase
L3_106_000M1_scaffold_2620_3
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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2039..3094
DNA (1056bp) protein (352aa)
Galactose mutarotase and related enzymes (EC:5.1.3.3)
Aldose 1-epimerase {ECO:0000256|PIRNR:PIRNR005096}; EC=5.1.3.3 {ECO:0000256|PIRNR:PIRNR005096, ECO:0000313|EMBL:CBK63638.1};; Galactose mutarotase {ECO:0000256|PIRNR:PIRNR005096}; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
galactose mutarotase n=1 Tax=Alistipes senegalensis RepID=UPI0002F19526
L3_106_000M1_scaffold_2620_4
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(3132..4823)
DNA (1692bp) protein (564aa)
sulfate permease n=1 Tax=Alistipes senegalensis RepID=UPI00036D10F7
Sulfate permease family protein {ECO:0000313|EMBL:CDD25042.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
putative sulfate permease transmembrane protein
L3_106_000M1_scaffold_2620_5
Alistipes sp. CAG:53, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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5090..7450
DNA (2361bp) protein (787aa)
membrane protein n=1 Tax=Alistipes senegalensis RepID=UPI00031792A6
Outer membrane receptor proteins mostly Fe transport {ECO:0000313|EMBL:CCZ97137.1}; TaxID=1262697 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:53.;"
Outer membrane receptor proteins, mostly Fe transport
L3_106_000M1_scaffold_2620_6
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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7491..8096
DNA (606bp) protein (202aa)
nicotinamide mononucleotide transporter n=1 Tax=Alistipes senegalensis RepID=UPI0002EE9B68
Nicotinamide mononucleotide transporter {ECO:0000313|EMBL:CDD25040.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
nicotinamide mononucleotide transporter PnuC
L3_106_000M1_scaffold_2620_7
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8144..8527)
DNA (384bp) protein (128aa)
hypothetical protein n=1 Tax=Alistipes senegalensis RepID=UPI0002E4507D
hypothetical protein
Uncharacterized protein conserved in bacteria {ECO:0000313|EMBL:CBK63634.1}; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
L3_106_000M1_scaffold_2620_8
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8613..9221
DNA (609bp) protein (203aa)
hypothetical protein n=1 Tax=Alistipes senegalensis RepID=UPI00031BE0A2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK63633.1}; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
L3_106_000M1_scaffold_2620_9
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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9684..10760
DNA (1077bp) protein (359aa)
transcriptional regulator n=1 Tax=Alistipes senegalensis RepID=UPI00030FBA0A
Transcriptional regulators
Transcriptional regulators {ECO:0000313|EMBL:CBK63630.1}; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
L3_106_000M1_scaffold_2620_10
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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10766..11578
DNA (813bp) protein (271aa)
dioxygenase n=1 Tax=Alistipes senegalensis RepID=UPI0002FAF4AA
Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
Dehydrogenases with different specificities (Related to short-chain alcohol dehydrogenases) {ECO:0000313|EMBL:CBK63631.1}; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
L3_106_000M1_scaffold_2620_11
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11735..12916
DNA (1182bp) protein (394aa)
D-mannonate dehydratase (EC:4.2.1.8)
Mannonate dehydratase {ECO:0000256|HAMAP-Rule:MF_00106, ECO:0000256|SAAS:SAAS00189414}; EC=4.2.1.8 {ECO:0000256|HAMAP-Rule:MF_00106, ECO:0000256|SAAS:SAAS00189414};; D-mannonate hydro-lyase {ECO:0000256|HAMAP-Rule:MF_00106}; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
mannonate dehydratase n=1 Tax=Alistipes senegalensis RepID=UPI0002D36708
L3_106_000M1_scaffold_2620_12
Alistipes sp. CAG:53, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13064..14041)
DNA (978bp) protein (326aa)
lipid kinase n=1 Tax=Alistipes senegalensis RepID=UPI0002E1238C
Uncharacterized protein {ECO:0000313|EMBL:CCZ97669.1}; TaxID=1262697 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:53.;"
hypothetical protein
L3_106_000M1_scaffold_2620_13
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14049..15506)
DNA (1458bp) protein (486aa)
aminoacyl-histidine dipeptidase (EC:3.4.13.3)
Aminoacyl-histidine dipeptidase {ECO:0000313|EMBL:CBK63707.1}; EC=3.4.13.3 {ECO:0000313|EMBL:CBK63707.1};; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
aminoacyl-histidine dipeptidase n=1 Tax=Alistipes senegalensis RepID=UPI0002EFAFF3
L3_106_000M1_scaffold_2620_14
Alistipes sp. CAG:268, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15674..16654)
DNA (981bp) protein (327aa)
phosphate starvation protein PhoH n=1 Tax=Alistipes senegalensis RepID=UPI0002DA2601
Phosphate starvation-inducible protein PhoH predicted ATPase {ECO:0000313|EMBL:CDC96559.1}; TaxID=1262693 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:268.;"
Phosphate starvation-inducible protein PhoH, predicted ATPase
L3_106_000M1_scaffold_2620_15
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16658..17254)
DNA (597bp) protein (199aa)
hypothetical protein n=1 Tax=Alistipes senegalensis RepID=UPI0002D5CE05
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK63709.1}; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
L3_106_000M1_scaffold_2620_16
Alistipes sp. CAG:53, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17271..18422)
DNA (1152bp) protein (384aa)
fucose permease n=1 Tax=Alistipes senegalensis RepID=UPI00030AD9A1
Transporter major facilitator family protein {ECO:0000313|EMBL:CCZ97673.1}; TaxID=1262697 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:53.;"
fucose permease
L3_106_000M1_scaffold_2620_17
Alistipes sp. CAG:53, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18730..20838
DNA (2109bp) protein (703aa)
sodium/hydrogen exchanger n=1 Tax=Alistipes senegalensis RepID=UPI0002F43F0B
transporter, CPA2 family (2.A.37)
Transporter CPA2 family (2.A.37) {ECO:0000313|EMBL:CCZ97674.1}; TaxID=1262697 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:53.;"
L3_106_000M1_scaffold_2620_18
Alistipes sp. CAG:53, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21114..22418
DNA (1305bp) protein (435aa)
GTP-binding protein Der n=1 Tax=Alistipes senegalensis RepID=UPI0002F1D60E
GTPase Der {ECO:0000256|HAMAP-Rule:MF_00195, ECO:0000256|RuleBase:RU004481}; GTP-binding protein EngA {ECO:0000256|HAMAP-Rule:MF_00195}; TaxID=1262697 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:53.;"
ribosome-associated GTPase EngA
L3_106_000M1_scaffold_2620_19
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22602..24146
DNA (1545bp) protein (515aa)
Catalase {ECO:0000256|RuleBase:RU000498}; EC=1.11.1.6 {ECO:0000256|RuleBase:RU000498};; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
Catalase (EC:1.11.1.6)
catalase n=1 Tax=Alistipes senegalensis RepID=UPI0003797E6E
Displaying 19 items

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