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L3_106_000M1_scaffold_2940

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_106_000M1_scaffold_2940_1
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(601..1731)
DNA (1131bp) protein (377aa)
Galactokinase {ECO:0000256|HAMAP-Rule:MF_00246, ECO:0000256|SAAS:SAAS00025843}; EC=2.7.1.6 {ECO:0000256|HAMAP-Rule:MF_00246, ECO:0000256|SAAS:SAAS00015833};; Galactose kinase {ECO:0000256|HAMAP-Rule:MF_00246}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
galactokinase n=1 Tax=Alistipes senegalensis RepID=UPI0002E51991
galactokinase
L3_106_000M1_scaffold_2940_2
Alistipes sp. CAG:53, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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1840..2748
DNA (909bp) protein (303aa)
Glycerophosphoryl diester phosphodiesterase (EC:3.1.4.46)
glycerophosphoryl diester phosphodiesterase n=1 Tax=Alistipes senegalensis RepID=UPI00037919E3
Glycerophosphoryl diester phosphodiesterase {ECO:0000313|EMBL:CCZ96743.1}; TaxID=1262697 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:53.;"
L3_106_000M1_scaffold_2940_3
Alistipes sp. CAG:53, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(3188..3982)
DNA (795bp) protein (265aa)
transcriptional regulator n=1 Tax=Alistipes senegalensis RepID=UPI0002E02A62
Transcriptional regulator of sugar metabolism {ECO:0000313|EMBL:CCZ96745.1}; TaxID=1262697 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:53.;"
sugar metabolism transcriptional regulator
L3_106_000M1_scaffold_2940_4
Alistipes sp. CAG:53, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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4187..5758
DNA (1572bp) protein (524aa)
FAD-dependent oxidoreductase n=1 Tax=Alistipes senegalensis RepID=UPI0003707006
Glycerol-3-phosphate dehydrogenase
Glycerol-3-phosphate dehydrogenase {ECO:0000313|EMBL:CCZ96746.1}; TaxID=1262697 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:53.;"
L3_106_000M1_scaffold_2940_5
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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5891..7279
DNA (1389bp) protein (463aa)
sn-glycerol-3-phosphate transporter n=1 Tax=Alistipes senegalensis RepID=UPI0002F17891
phosphoglycerate transporter family protein
Phosphoglycerate transporter family protein {ECO:0000313|EMBL:AFL78815.1}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
L3_106_000M1_scaffold_2940_6
Alistipes sp. CAG:53, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(7290..7865)
DNA (576bp) protein (192aa)
metal-dependent hydrolase n=1 Tax=Alistipes senegalensis RepID=UPI000303EAC5
Predicted metal-dependent hydrolase {ECO:0000313|EMBL:CCZ96748.1}; TaxID=1262697 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:53.;"
Predicted metal-dependent hydrolase
L3_106_000M1_scaffold_2940_7
Alistipes sp. CAG:53, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(7862..9598)
DNA (1737bp) protein (579aa)
membrane protein n=1 Tax=Alistipes senegalensis RepID=UPI000304F7DB
Putative membrane protein {ECO:0000313|EMBL:CCZ96749.1}; TaxID=1262697 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:53.;"
hypothetical protein
L3_106_000M1_scaffold_2940_8
Alistipes sp. CAG:53, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9750..10487)
DNA (738bp) protein (246aa)
rRNA methylase, putative, group 3 (EC:2.1.1.-)
RNA methyltransferase n=1 Tax=Alistipes senegalensis RepID=UPI00030FFB76
rRNA methylase putative group 3 {ECO:0000313|EMBL:CCZ96750.1}; TaxID=1262697 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:53.;"
L3_106_000M1_scaffold_2940_9
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(10480..12432)
DNA (1953bp) protein (651aa)
glycosyl transferase family 2 n=1 Tax=Alistipes senegalensis RepID=UPI000311BFEC
ATPase components of ABC transporters with duplicated ATPase domains
ATPase components of ABC transporters with duplicated ATPase domains {ECO:0000313|EMBL:CBK64325.1}; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
L3_106_000M1_scaffold_2940_10
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12512..13072
DNA (561bp) protein (187aa)
phosphohydrolase n=1 Tax=Alistipes senegalensis RepID=UPI0002DB8C6E
Predicted hydrolases of HD superfamily
Predicted hydrolases of HD superfamily {ECO:0000313|EMBL:CBK64326.1}; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
L3_106_000M1_scaffold_2940_11
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13062..13688)
DNA (627bp) protein (209aa)
ribulose-5-phosphate 3-epimerase (EC:5.1.3.1)
Ribulose-5-phosphate 3-epimerase {ECO:0000313|EMBL:CBK64327.1}; EC=5.1.3.1 {ECO:0000313|EMBL:CBK64327.1};; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
ribulose-phosphate 3-epimerase n=1 Tax=Alistipes senegalensis RepID=UPI000365BC6F
L3_106_000M1_scaffold_2940_12
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13875..15074)
DNA (1200bp) protein (400aa)
membrane protein n=1 Tax=Alistipes senegalensis RepID=UPI0002DA0D68
Uncharacterized protein {ECO:0000313|EMBL:CCZ77359.1}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
hypothetical protein
L3_106_000M1_scaffold_2940_13
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15071..15718)
DNA (648bp) protein (216aa)
ABC transporter ATP-binding protein n=1 Tax=Alistipes senegalensis RepID=UPI0002D409A2
antimicrobial peptide ABC transporter ATPase
ABC-type antimicrobial peptide transport system, ATPase component {ECO:0000313|EMBL:AFL78807.1}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
L3_106_000M1_scaffold_2940_14
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15786..17360)
DNA (1575bp) protein (525aa)
hypothetical protein n=1 Tax=Alistipes senegalensis RepID=UPI0002F28004
Uncharacterized protein {ECO:0000313|EMBL:EFR58361.1}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
hypothetical protein
L3_106_000M1_scaffold_2940_15
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17517..18944
DNA (1428bp) protein (476aa)
DNA recombination protein RmuC n=1 Tax=Alistipes senegalensis RepID=UPI000303ADB6
RmuC domain protein {ECO:0000313|EMBL:EFR58375.1}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
hypothetical protein
L3_106_000M1_scaffold_2940_16
Alistipes sp. CAG:53, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18990..19541)
DNA (552bp) protein (184aa)
hypothetical protein n=1 Tax=Alistipes senegalensis RepID=UPI0002E79991
Uncharacterized protein {ECO:0000313|EMBL:CCZ96269.1}; TaxID=1262697 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:53.;"
hypothetical protein
L3_106_000M1_scaffold_2940_17
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(19557..20264)
DNA (708bp) protein (236aa)
hypothetical protein n=1 Tax=Alistipes sp. JC136 RepID=UPI000288254C
Inactive homolog of metal-dependent proteases, putative molecular chaperone
Inactive homolog of metal-dependent proteases, putative molecular chaperone {ECO:0000313|EMBL:CBK64329.1}; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
L3_106_000M1_scaffold_2940_18
Alistipes sp. CAG:53, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20277..21056)
DNA (780bp) protein (260aa)
HAD family hydrolase n=1 Tax=Alistipes senegalensis RepID=UPI0002DEE8EB
HAD-superfamily hydrolase subfamily IIB {ECO:0000313|EMBL:CCZ96267.1}; TaxID=1262697 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:53.;"
HAD-superfamily hydrolase
L3_106_000M1_scaffold_2940_19
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21053..21517)
DNA (465bp) protein (155aa)
single-stranded DNA-binding protein n=1 Tax=Alistipes senegalensis RepID=UPI0002FFD015
SsrA-binding protein
SsrA-binding protein {ECO:0000256|HAMAP-Rule:MF_00023, ECO:0000256|SAAS:SAAS00023472}; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
Displaying 19 items

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