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L3_106_000M1_scaffold_3799

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_106_000M1_scaffold_3799_1
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(3..1142)
DNA (1140bp) protein (380aa)
S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase) (EC:5.-.-.-)
S-adenosylmethionine:tRNA ribosyltransferase-isomerase {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094456}; EC=2.4.99.17 {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094434};; Queuosine biosynthesis protein QueA {ECO:0000256|HAMAP-Rule:MF_00113}; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
S-adenosylmethionine tRNA ribosyltransferase n=1 Tax=Alistipes senegalensis RepID=UPI000378D3CC
L3_106_000M1_scaffold_3799_2
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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1224..2780
DNA (1557bp) protein (519aa)
L-aspartate oxidase (EC:1.4.3.16)
L-aspartate oxidase {ECO:0000256|RuleBase:RU362049, ECO:0000313|EMBL:CBK64556.1}; EC=1.4.3.16 {ECO:0000256|RuleBase:RU362049, ECO:0000313|EMBL:CBK64556.1};; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
L-aspartate oxidase n=1 Tax=Alistipes sp. JC136 RepID=UPI0002899C2B
L3_106_000M1_scaffold_3799_3
Alistipes sp. CAG:53, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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2784..4367
DNA (1584bp) protein (528aa)
peptide chain release factor 3 n=1 Tax=Alistipes senegalensis RepID=UPI0002E50DA8
bacterial peptide chain release factor 3 (bRF-3)
Peptide chain release factor 3 {ECO:0000256|HAMAP-Rule:MF_00072, ECO:0000256|SAAS:SAAS00089051}; Short=RF-3 {ECO:0000256|HAMAP-Rule:MF_00072};; TaxID=1262697 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:53.;"
L3_106_000M1_scaffold_3799_4
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(4468..6570)
DNA (2103bp) protein (701aa)
L-lysine 2,3-aminomutase {ECO:0000313|EMBL:CBK64553.1}; EC=5.4.3.2 {ECO:0000313|EMBL:CBK64553.1};; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
L-lysine 2,3-aminomutase (EC:5.4.3.2)
KamA family protein n=1 Tax=Alistipes senegalensis RepID=UPI00037D54CA
L3_106_000M1_scaffold_3799_5
Sphingobacterium paucimobilis, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(6859..8334)
DNA (1476bp) protein (492aa)
hypothetical protein n=1 Tax=Alistipes senegalensis RepID=UPI00035F7160
Uncharacterized protein {ECO:0000313|EMBL:ERJ61384.1}; TaxID=1346330 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium paucimobilis HER1398.;"
L3_106_000M1_scaffold_3799_6
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(8349..9251)
DNA (903bp) protein (301aa)
hypothetical protein n=1 Tax=Alistipes senegalensis RepID=UPI0002F06168
Sugar phosphate isomerases/epimerases
Tax=GWE2_Bacteroidetes_42_39_curated
L3_106_000M1_scaffold_3799_7
Alistipes sp. CAG:53, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(9259..10263)
DNA (1005bp) protein (335aa)
hypothetical protein n=1 Tax=Alistipes senegalensis RepID=UPI0002FC73D6
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCZ97629.1}; TaxID=1262697 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:53.;"
L3_106_000M1_scaffold_3799_8
Sphingobacterium paucimobilis, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(10291..11883)
DNA (1593bp) protein (531aa)
hypothetical protein n=1 Tax=Alistipes senegalensis RepID=UPI0002DD0D6E
Uncharacterized protein {ECO:0000313|EMBL:ERJ61386.1}; TaxID=1346330 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium paucimobilis HER1398.;"
RagB/SusD domain-containing protein
L3_106_000M1_scaffold_3799_9
Sphingobacterium paucimobilis, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(11901..15287)
DNA (3387bp) protein (1129aa)
hypothetical protein n=1 Tax=Alistipes senegalensis RepID=UPI00030ABA14
Uncharacterized protein {ECO:0000313|EMBL:ERJ61387.1}; TaxID=1346330 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium paucimobilis HER1398.;"
Outer membrane receptor for ferrienterochelin and colicins
L3_106_000M1_scaffold_3799_10
Bacteroides sp. CAG:875, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(15429..16406)
DNA (978bp) protein (326aa)
hypothetical protein n=1 Tax=Alistipes senegalensis RepID=UPI0002E31948
anti-sigma factor
Putative phage tail component domain protein {ECO:0000313|EMBL:CDD48623.1}; TaxID=1262752 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:875.;"
L3_106_000M1_scaffold_3799_11
unknown

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comp(16491..16619)
DNA (129bp) protein (43aa)
hypothetical protein n=1 Tax=Alistipes senegalensis RepID=UPI000379FF69
Displaying 11 items

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