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L3_106_000M1_scaffold_3989

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_106_000M1_scaffold_3989_1
Alistipes sp. CAG:53, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(59..1513)
DNA (1455bp) protein (485aa)
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase {ECO:0000256|HAMAP-Rule:MF_00208}; EC=6.3.2.13 {ECO:0000256|HAMAP-Rule:MF_00208};; Meso-A2pm-adding enzyme {ECO:0000256|HAMAP-Rule:MF_00208}; Meso-diaminopimelate-adding enzyme {ECO:0000256|HAMAP-Rule:MF_00208}; UDP-MurNAc-L-Ala-D-Glu:meso-diaminopimelate ligase {ECO:0000256|HAMAP-Rule:MF_00208}; UDP-MurNAc-tripeptide synthetase {ECO:0000256|HAMAP-Rule:MF_00208}; UDP-N-acetylmuramyl-tripeptide synthetase {ECO:0000256|HAMAP-Rule:MF_00208}; TaxID=1262697 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:53.;"
UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelat e ligase (EC:6.3.2.13)
UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase n=1 Tax=Alistipes senegalensis RepID=UPI000313377C
L3_106_000M1_scaffold_3989_2
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(1515..3773)
DNA (2259bp) protein (753aa)
Cell division protein FtsI/penicillin-binding protein 2 {ECO:0000313|EMBL:CBK63969.1}; EC=2.4.1.129 {ECO:0000313|EMBL:CBK63969.1};; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
Cell division protein FtsI/penicillin-binding protein 2 (EC:2.4.1.129)
cell division protein FtsI n=1 Tax=Alistipes senegalensis RepID=UPI0002FE099C
L3_106_000M1_scaffold_3989_3
Alistipes sp. CAG:53, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(3780..4295)
DNA (516bp) protein (172aa)
hypothetical protein n=1 Tax=Alistipes sp. JC136 RepID=UPI0002897141
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCZ96498.1}; TaxID=1262697 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:53.;"
L3_106_000M1_scaffold_3989_4
Alistipes sp. CAG:53, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(4440..5360)
DNA (921bp) protein (307aa)
S-adenosyl-methyltransferase MraW (EC:2.1.1.-)
Ribosomal RNA small subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_01007}; EC=2.1.1.199 {ECO:0000256|HAMAP-Rule:MF_01007};; 16S rRNA m(4)C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01007}; rRNA (cytosine-N(4)-)-methyltransferase RsmH {ECO:0000256|HAMAP-Rule:MF_01007}; TaxID=1262697 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:53.;"
16S rRNA methyltransferase n=1 Tax=Alistipes senegalensis RepID=UPI0002EE8217
L3_106_000M1_scaffold_3989_5
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(6860..7093)
DNA (234bp) protein (78aa)
Uncharacterized protein n=1 Tax=Bacteroides stercoris CC31F RepID=S3YS42_BACSE
Uncharacterized protein {ECO:0000313|EMBL:EPH20453.1}; TaxID=1073351 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris CC31F.;"
L3_106_000M1_scaffold_3989_6
Bacteroides xylanisolvens, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(7225..7536)
DNA (312bp) protein (104aa)
DNA binding domain, excisionase family n=1 Tax=Bacteroides xylanisolvens XB1A RepID=D6D726_9BACE
DNA binding domain, excisionase family
DNA binding domain, excisionase family {ECO:0000313|EMBL:CBK65821.1}; TaxID=657309 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides xylanisolvens XB1A.;"
L3_106_000M1_scaffold_3989_7
Bacteroides xylanisolvens, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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8764..9291
DNA (528bp) protein (176aa)
Putative uncharacterized protein n=1 Tax=Bacteroides xylanisolvens XB1A RepID=D6D724_9BACE
Protein of unknown function (DUF3408).
Uncharacterized protein {ECO:0000313|EMBL:CBK65819.1}; TaxID=657309 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides xylanisolvens XB1A.;"
L3_106_000M1_scaffold_3989_8
Bacteroides coprocola, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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9501..9866
DNA (366bp) protein (122aa)
Uncharacterized protein n=1 Tax=Bacteroides coprocola DSM 17136 RepID=B3JH49_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EDV01793.1}; TaxID=470145 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides coprocola DSM 17136.;"
mobilization protein MobC
L3_106_000M1_scaffold_3989_9
Bacteroides sp. CAG:20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9863..10795
DNA (933bp) protein (311aa)
Relaxase/Mobilisation nuclease domain n=1 Tax=Bacteroides sp. CAG:20 RepID=R5EV14_9BACE
Relaxase/Mobilisation nuclease domain {ECO:0000313|EMBL:CCX96510.1}; TaxID=1262738 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:20.;"
Relaxase/Mobilisation nuclease domain.
L3_106_000M1_scaffold_3989_10
Bacteroides xylanisolvens, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10823..11557
DNA (735bp) protein (245aa)
Putative uncharacterized protein n=1 Tax=Bacteroides xylanisolvens XB1A RepID=D6D722_9BACE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK65817.1}; TaxID=657309 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides xylanisolvens XB1A.;"
L3_106_000M1_scaffold_3989_11
Bacteroides sp. D20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11565..12773
DNA (1209bp) protein (403aa)
Site-specific recombinase, phage integrase family n=1 Tax=Bacteroides sp. D20 RepID=D2EW63_9BACE
Site-specific recombinase, phage integrase family {ECO:0000313|EMBL:EFA19899.1}; TaxID=585543 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D20.;"
Site-specific recombinase XerD
L3_106_000M1_scaffold_3989_12
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13046..14314
DNA (1269bp) protein (423aa)
Uncharacterized protein n=1 Tax=Bacteroides stercoris CC31F RepID=S3YFR3_BACSE
Uncharacterized protein {ECO:0000313|EMBL:EPH20462.1}; TaxID=1073351 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris CC31F.;"
hypothetical protein
L3_106_000M1_scaffold_3989_13
Bacteroides sp. D20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14311..15357
DNA (1047bp) protein (349aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. D20 RepID=D2EW60_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EFA19896.1}; TaxID=585543 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D20.;"
hypothetical protein
L3_106_000M1_scaffold_3989_14
Bacteroides sp. D20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15360..17981
DNA (2622bp) protein (874aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. D20 RepID=D2EW59_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EFA19895.1}; TaxID=585543 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D20.;"
L3_106_000M1_scaffold_3989_15
Bacteroides sp. D20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17987..18892
DNA (906bp) protein (302aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. D20 RepID=D2EW58_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EFA19894.1}; TaxID=585543 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D20.;"
L3_106_000M1_scaffold_3989_16
Bacteroides sp. D20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19134..21431
DNA (2298bp) protein (766aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. D20 RepID=D2EW57_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EFA19893.1}; TaxID=585543 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D20.;"
hypothetical protein
L3_106_000M1_scaffold_3989_17
Bacteroides sp. D20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21523..21906)
DNA (384bp) protein (128aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. D20 RepID=D2EW56_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EFA19892.1}; TaxID=585543 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D20.;"
hypothetical protein
L3_106_000M1_scaffold_3989_18
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21909..23132)
DNA (1224bp) protein (408aa)
Uncharacterized protein n=1 Tax=Bacteroides stercoris CC31F RepID=S3YFR8_BACSE
Uncharacterized protein {ECO:0000313|EMBL:EPH20467.1}; TaxID=1073351 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris CC31F.;"
hypothetical protein
L3_106_000M1_scaffold_3989_19
Prevotella stercorea, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23398..23499)
DNA (102bp) protein (34aa)
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Bacteroides sp. 3_1_33FAA RepID=D1K2E5_9BACE
histidine kinase
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein {ECO:0000313|EMBL:EHJ42088.1}; TaxID=1002367 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella stercorea DSM 18206.;"
Displaying 19 items

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