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L3_106_000M1_scaffold_1031

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Displaying items 1-30 of 39 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_106_000M1_scaffold_1031_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(300..566)
DNA (267bp) protein (89aa)
Uncharacterized protein n=10 Tax=Escherichia coli RepID=Q8FKQ0_ECOL6
putative transposase
Transposase {ECO:0000313|EMBL:EYZ92782.1}; TaxID=1446551 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O119:H4 str. 03-3458.;"
L3_106_000M1_scaffold_1031_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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2709..6824
DNA (4116bp) protein (1372aa)
Serine protease pic autotransporter n=110 Tax=Escherichia coli RepID=PIC_ECOL6
Serine protease pic {ECO:0000313|EMBL:EGI51999.1}; TaxID=656393 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli H299.;"
IgA-specific serine endopeptidase precursor
L3_106_000M1_scaffold_1031_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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7071..7343
DNA (273bp) protein (91aa)
Predicted adhesin biosynthesis transcription regulatory PapB family protein n=125 Tax=Escherichia coli RepID=E1P7I8_ECOAB
PefB protein
Major pilu subunit operon regulatory protein PapB {ECO:0000313|EMBL:EGI51998.1}; TaxID=656393 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli H299.;"
L3_106_000M1_scaffold_1031_4
Escherichia sp. KTE114, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7827..8951)
DNA (1125bp) protein (375aa)
Transposase n=1 Tax=Escherichia coli O83:H1 (strain NRG 857C / AIEC) RepID=E4P792_ECO8N
transposase
Uncharacterized protein {ECO:0000313|EMBL:EOU49426.1}; TaxID=1169321 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia sp. KTE114.;"
L3_106_000M1_scaffold_1031_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9096..9338)
DNA (243bp) protein (81aa)
Uncharacterized protein n=98 Tax=Escherichia coli RepID=E1P7I5_ECOAB
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:EGI51995.1}; TaxID=656393 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli H299.;"
L3_106_000M1_scaffold_1031_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9374..9613)
DNA (240bp) protein (80aa)
Uncharacterized protein n=72 Tax=Escherichia coli RepID=E6ADG5_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:EYZ95695.1}; TaxID=1446551 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O119:H4 str. 03-3458.;"
L3_106_000M1_scaffold_1031_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9610..9801)
DNA (192bp) protein (64aa)
Uncharacterized protein n=159 Tax=Escherichia coli RepID=C2DMM0_ECOLX
Tat pathway signal sequence {ECO:0000313|EMBL:KHI25000.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
hypothetical protein
L3_106_000M1_scaffold_1031_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9838..10215)
DNA (378bp) protein (126aa)
Tat pathway signal sequence domain protein n=116 Tax=Escherichia coli RepID=E6ADG7_ECOLX
Adhesin {ECO:0000313|EMBL:EYZ95696.1}; TaxID=1446551 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O119:H4 str. 03-3458.;"
hypothetical protein
L3_106_000M1_scaffold_1031_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10291..10749)
DNA (459bp) protein (153aa)
Uncharacterized protein n=98 Tax=Escherichia coli RepID=D7YU20_ECOLX
Putative uncharacterized protein {ECO:0000313|EMBL:EGI51994.1}; TaxID=656393 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli H299.;"
hypothetical protein
L3_106_000M1_scaffold_1031_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10736..20386)
DNA (9651bp) protein (3217aa)
putative member of ShlA/HecA/FhaA exoprotein family (EC:3.4.21.-)
ShlA/HecA/FhaA exofamily protein n=54 Tax=Escherichia coli RepID=G7R4C6_ECOC2
Putative hemagglutinin {ECO:0000313|EMBL:EIH26559.1}; TaxID=869675 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 1.2264.;"
L3_106_000M1_scaffold_1031_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20399..20833)
DNA (435bp) protein (145aa)
Uncharacterized protein n=41 Tax=Escherichia coli RepID=D7Z4N1_ECOLX
putative hemolysin activator ShlB-type
Hemolysin secretion/activation protein, ShlB/FhaC/HecB family {ECO:0000313|EMBL:EIH26495.1}; TaxID=869675 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 1.2264.;"
L3_106_000M1_scaffold_1031_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20900..22006)
DNA (1107bp) protein (369aa)
Hemolysin activator HlyB n=1 Tax=Escherichia coli KTE214 RepID=L3FW65_ECOLX
putative hemolysin activator ShlB-type
POTRA domain, ShlB-type family protein {ECO:0000313|EMBL:KEJ66097.1}; TaxID=1444220 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 3-020-07_S4_C1.;"
L3_106_000M1_scaffold_1031_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22393..23016)
DNA (624bp) protein (208aa)
Uncharacterized protein n=140 Tax=Escherichia coli RepID=E1P7I0_ECOAB
hypothetical protein
DNA-binding protein {ECO:0000313|EMBL:EYZ95700.1}; TaxID=1446551 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O119:H4 str. 03-3458.;"
L3_106_000M1_scaffold_1031_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23771..24802)
DNA (1032bp) protein (344aa)
Uncharacterized protein n=119 Tax=Escherichia coli RepID=G7R3N3_ECOC2
hypothetical protein
LacI family transcriptional regulator {ECO:0000313|EMBL:EYZ95701.1}; TaxID=1446551 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O119:H4 str. 03-3458.;"
L3_106_000M1_scaffold_1031_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25073..25516
DNA (444bp) protein (148aa)
PTS system, mannitol (Cryptic)-specific IIA n=201 Tax=Enterobacteriaceae RepID=G7R3N2_ECOC2
PTS system, mannitol (Cryptic)-specific IIA
Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 {ECO:0000313|EMBL:EFU33381.1}; TaxID=679202 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 85-1.;"
L3_106_000M1_scaffold_1031_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25532..25819
DNA (288bp) protein (96aa)
PTS system protein n=156 Tax=Escherichia coli RepID=E1P7H6_ECOAB
hypothetical protein
PTS system, Lactose/Cellobiose specific IIB subunit {ECO:0000313|EMBL:KEN63021.1}; TaxID=1444275 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 1-392-07_S4_C3.;"
L3_106_000M1_scaffold_1031_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25832..27088
DNA (1257bp) protein (419aa)
Ascorbate-specific PTS system enzyme IIC n=146 Tax=Escherichia coli RepID=G7R3N0_ECOC2
putative sugar-specific permease SgaT/UlaA
Putative membrane protein {ECO:0000313|EMBL:EGI50408.1}; TaxID=656393 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli H299.;"
L3_106_000M1_scaffold_1031_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27335..27589)
DNA (255bp) protein (85aa)
Uncharacterized protein n=225 Tax=Enterobacteriaceae RepID=D2NGR6_ECOS5
putative transposase (partial)
Mobile element protein {ECO:0000313|EMBL:CDK45754.1}; TaxID=1433131 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli IS1.;"
L3_106_000M1_scaffold_1031_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28011..29024)
DNA (1014bp) protein (338aa)
Deoxyribose specific mutarotase n=286 Tax=Enterobacteriaceae RepID=B7LDS6_ECO55
Deoxyribose specific mutarotase
Uncharacterized protein {ECO:0000313|EMBL:EFU33385.1}; TaxID=679202 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 85-1.;"
L3_106_000M1_scaffold_1031_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29036..30352)
DNA (1317bp) protein (439aa)
L-fucose:H+ symporter permease n=132 Tax=Escherichia coli RepID=C2DTP4_ECOLX
putative L-fucose permease
L-fucose:H+ symporter permease {ECO:0000313|EMBL:EIH26615.1}; TaxID=869675 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 1.2264.;"
L3_106_000M1_scaffold_1031_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30380..31300)
DNA (921bp) protein (307aa)
deoK; Deoxyribokinase (EC:2.7.1.15)
Ribokinase {ECO:0000313|EMBL:EFK17471.1}; EC=2.7.1.15 {ECO:0000313|EMBL:EFK17471.1};; TaxID=749538 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 116-1.;"
DeoK n=408 Tax=Enterobacteriaceae RepID=Q67FX7_ECOLX
L3_106_000M1_scaffold_1031_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31606..32388
DNA (783bp) protein (261aa)
Transcriptional regulator, DeoR family n=122 Tax=Escherichia coli RepID=C2DTP6_ECOLX
DeoR family transcriptional regulator
DeoR-like helix-turn-helix domain protein {ECO:0000313|EMBL:KEJ68463.1}; TaxID=1444223 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 3-267-03_S4_C1.;"
L3_106_000M1_scaffold_1031_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33927..34385
DNA (459bp) protein (153aa)
Uncharacterized protein n=113 Tax=Escherichia coli RepID=G7R3M3_ECOC2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EQO53464.1}; TaxID=1280991 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 41 (4-2677849).;"
L3_106_000M1_scaffold_1031_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34728..35156
DNA (429bp) protein (143aa)
Uncharacterized protein n=42 Tax=Escherichia coli RepID=G7R3M2_ECOC2
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:EGI50416.1}; TaxID=656393 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli H299.;"
L3_106_000M1_scaffold_1031_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35476..36438)
DNA (963bp) protein (321aa)
Uncharacterized protein n=125 Tax=Escherichia coli RepID=G7R3M1_ECOC2
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:EGI50417.1}; TaxID=656393 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli H299.;"
L3_106_000M1_scaffold_1031_26
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(36549..38783)
DNA (2235bp) protein (745aa)
Exopolygalacturonate lyase n=125 Tax=Escherichia coli RepID=V8JUV3_ECOLX
Exopolygalacturonate lyase {ECO:0000313|EMBL:EYZ95714.1}; TaxID=1446551 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O119:H4 str. 03-3458.;"
putative exopolygalacturonate lyase
L3_106_000M1_scaffold_1031_27
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(38785..40299)
DNA (1515bp) protein (505aa)
Uncharacterized protein n=126 Tax=Escherichia coli RepID=C2DTQ5_ECOLX
putative oligogalacturonide transporter
Oligogalacturonide transporter {ECO:0000313|EMBL:EGI50419.1}; TaxID=656393 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli H299.;"
L3_106_000M1_scaffold_1031_28
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(40665..40988)
DNA (324bp) protein (108aa)
Cupin n=1 Tax=Escherichia coli SEPT362 RepID=M2NYM2_ECOLX
Putative pectin degradation protein {ECO:0000313|EMBL:EGI50420.1}; TaxID=656393 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli H299.;"
Pectin degradation protein KdgF
L3_106_000M1_scaffold_1031_29
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(41043..41843)
DNA (801bp) protein (267aa)
Gluconate 5-dehydrogenase {ECO:0000313|EMBL:EYZ95717.1}; EC=1.1.1.69 {ECO:0000313|EMBL:EYZ95717.1};; TaxID=1446551 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O119:H4 str. 03-3458.;"
Gluconate 5-dehydrogenase n=149 Tax=Escherichia coli RepID=E1P7G1_ECOAB
gluconate 5-dehydrogenase
L3_106_000M1_scaffold_1031_30
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(41873..43045)
DNA (1173bp) protein (391aa)
Oligogalacturonide lyase n=108 Tax=Escherichia coli RepID=F4TV62_ECOLX
putative oligogalacturonide lyase
Oligogalacturonate lyase {ECO:0000313|EMBL:EYZ95718.1}; TaxID=1446551 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O119:H4 str. 03-3458.;"
Displaying items 1-30 of 39 in total

View Taxonomy