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L3_106_000M1_scaffold_1910

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Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_106_000M1_scaffold_1910_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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2..1507
DNA (1506bp) protein (502aa)
Type VI secretion system Vgr family protein n=3 Tax=Escherichia coli RepID=L3NY30_ECOLX
Vgr-like protein
Type VI secretion system secreted protein VgrG {ECO:0000313|EMBL:EQP56412.1}; TaxID=1281011 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 70 (4-2963531).;"
L3_106_000M1_scaffold_1910_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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1494..2096
DNA (603bp) protein (201aa)
Uncharacterized protein n=130 Tax=Escherichia coli RepID=G7R5H7_ECOC2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EQP56413.1}; TaxID=1281011 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 70 (4-2963531).;"
L3_106_000M1_scaffold_1910_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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2065..2628
DNA (564bp) protein (188aa)
Uncharacterized protein n=7 Tax=Escherichia coli RepID=L2YHU8_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:EQP56414.1}; TaxID=1281011 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 70 (4-2963531).;"
hypothetical protein
L3_106_000M1_scaffold_1910_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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2621..3070
DNA (450bp) protein (150aa)
Uncharacterized protein n=12 Tax=Escherichia coli RepID=L3CGE8_ECOLX
hypothetical protein
Uncharacterised protein {ECO:0000313|EMBL:CKI15003.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
L3_106_000M1_scaffold_1910_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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3469..3684
DNA (216bp) protein (72aa)
Uncharacterized protein n=286 Tax=Escherichia RepID=B7MMU5_ECO45
hypothetical protein
Uncharacterised protein {ECO:0000313|EMBL:CKI15016.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
L3_106_000M1_scaffold_1910_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4001..4570)
DNA (570bp) protein (190aa)
Uncharacterized protein yddH n=279 Tax=Escherichia RepID=E2QM18_ECOLX
yddH; hypothetical protein
Flavin reductase like domain protein {ECO:0000313|EMBL:EZJ52169.1}; TaxID=1444228 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-005-03_S4_C2.;"
L3_106_000M1_scaffold_1910_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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4745..5590
DNA (846bp) protein (282aa)
nhoA; N-hydroxyarylamine O-acetyltransferase (EC:2.3.1.118)
N-hydroxyarylamine O-acetyltransferase {ECO:0000313|EMBL:CAR07813.2}; EC=2.3.1.118 {ECO:0000313|EMBL:CAR07813.2};; TaxID=585397 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O81 (strain ED1a).;"
N-hydroxyarylamine O-acetyltransferase n=265 Tax=Escherichia RepID=E2QM19_ECOLX
L3_106_000M1_scaffold_1910_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5686..6579)
DNA (894bp) protein (298aa)
Phenazine biosynthesis protein PhzF family n=115 Tax=Escherichia coli RepID=E1P8N1_ECOAB
yddE; hypothetical protein
PhzF family phenazine biosynthesis protein {ECO:0000313|EMBL:ELJ73859.1}; TaxID=1169364 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE85.;"
L3_106_000M1_scaffold_1910_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6659..7339)
DNA (681bp) protein (227aa)
narV; respiratory nitrate reductase 2, gamma subunit (EC:1.7.99.4)
Respiratory nitrate reductase 2, gamma subunit n=114 Tax=Escherichia coli RepID=E1P9B3_ECOAB
Respiratory nitrate reductase 2 gamma chain {ECO:0000313|EMBL:EQP56420.1}; TaxID=1281011 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 70 (4-2963531).;"
L3_106_000M1_scaffold_1910_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7336..8031)
DNA (696bp) protein (232aa)
Nitrate reductase molybdenum cofactor assembly chaperone 2 n=206 Tax=Escherichia coli RepID=B1LFF1_ECOSM
narW; respiratory nitrate reductase 2 subunit delta
Nitrate reductase molybdenum cofactor assembly chaperone {ECO:0000313|EMBL:ELE43632.1}; TaxID=1182673 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE66.;"
L3_106_000M1_scaffold_1910_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8031..9575)
DNA (1545bp) protein (515aa)
Nitrate reductase 2, beta subunit n=113 Tax=Escherichia coli RepID=E1P9B5_ECOAB
narY; respiratory nitrate reductase 2 subunit beta
Nitrate reductase, beta subunit {ECO:0000313|EMBL:EGI17619.1}; TaxID=656417 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli M605.;"
L3_106_000M1_scaffold_1910_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9572..13312)
DNA (3741bp) protein (1247aa)
Respiratory nitrate reductase 2 alpha chain n=106 Tax=Escherichia coli RepID=G7R5I8_ECOC2
narZ; respiratory nitrate reductase 2 alpha chain
Respiratory nitrate reductase 2 alpha chain {ECO:0000313|EMBL:EOV99416.1}; TaxID=1182698 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE98.;"
L3_106_000M1_scaffold_1910_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(13407..14795)
DNA (1389bp) protein (463aa)
Nitrite extrusion protein 2 n=111 Tax=Escherichia coli RepID=G7R5I9_ECOC2
narU; nitrite extrusion protein 2
Nitrite extrusion protein 2 {ECO:0000313|EMBL:EOU79769.1}; TaxID=1169343 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE24.;"
L3_106_000M1_scaffold_1910_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(15068..15892)
DNA (825bp) protein (275aa)
Inner membrane protein yddG n=260 Tax=Escherichia RepID=E2QM26_ECOLX
hypothetical protein
Aromatic amino acid exporter {ECO:0000313|EMBL:EHU29262.1}; TaxID=868137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC1E.;"
L3_106_000M1_scaffold_1910_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16182..16769
DNA (588bp) protein (196aa)
formate dehydrogenase, subunit alpha (EC:1.7.99.4)
Formate dehydrogenase, nitrate-inducible, major subunit {ECO:0000313|EMBL:EFK01325.1}; EC=1.2.1.2 {ECO:0000313|EMBL:EFK01325.1};; TaxID=749545 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 182-1.;"
Formate dehydrogenase-N, alpha subunit, nitrate-inducible n=9 Tax=Escherichia RepID=B7LQW5_ESCF3
L3_106_000M1_scaffold_1910_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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16818..19229
DNA (2412bp) protein (804aa)
Alpha major of nitrate-inducible formate dehydrogenase FdnG n=106 Tax=Escherichia coli RepID=E1P9B9_ECOAB
fdnG; alpha major of nitrate-inducible formate dehydrogenase FdnG
Formate dehydrogenase, alpha subunit {ECO:0000313|EMBL:ESD75835.1}; Flags: Fragment;; TaxID=1268995 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 908525.;"
L3_106_000M1_scaffold_1910_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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19242..20126
DNA (885bp) protein (295aa)
Formate dehydrogenase-N, Fe-S (Beta) subunit, nitrate-inducible n=308 Tax=Escherichia RepID=B7MMV6_ECO45
fdnH; formate dehydrogenase-N beta subunit
Formate dehydrogenase, nitrate-inducible, iron-sulfur subunit {ECO:0000313|EMBL:EQP56428.1}; TaxID=1281011 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 70 (4-2963531).;"
L3_106_000M1_scaffold_1910_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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20119..20772
DNA (654bp) protein (218aa)
Formate dehydrogenase-N subunit gamma n=3 Tax=Escherichia coli RepID=G7R5J2_ECOC2
fdnI; formate dehydrogenase-N subunit gamma
Formate dehydrogenase, nitrate-inducible, cytochrome b556(Fdn) subunit {ECO:0000313|EMBL:ELE60947.1}; TaxID=1182683 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE76.;"
L3_106_000M1_scaffold_1910_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(21001..21285)
DNA (285bp) protein (95aa)
Uncharacterized protein n=7 Tax=Escherichia coli RepID=J7R0W1_ECOLX
yddM; putative DNA-binding transcriptional regulator
Addiction module antidote protein HigA {ECO:0000313|EMBL:EIG83836.1}; TaxID=869669 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 1.2741.;"
L3_106_000M1_scaffold_1910_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(21285..21563)
DNA (279bp) protein (93aa)
Uncharacterized protein n=310 Tax=Escherichia RepID=B7MMV9_ECO45
Plasmid maintenance system killer protein
Putative plasmid maintenance protein {ECO:0000313|EMBL:CKI15301.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
L3_106_000M1_scaffold_1910_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21659..21829
DNA (171bp) protein (57aa)
Uncharacterized protein n=132 Tax=Escherichia coli RepID=L2WR79_ECOLX
hypothetical protein
Uncharacterised protein {ECO:0000313|EMBL:CKI15312.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
L3_106_000M1_scaffold_1910_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21749..22759)
DNA (1011bp) protein (337aa)
GroES-like protein n=2 Tax=Escherichia coli RepID=D7YT11_ECOLX
adhP; alcohol dehydrogenase
Alcohol dehydrogenase, propanol-preferring {ECO:0000313|EMBL:ESD32107.1}; TaxID=1268991 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 908519.;"
L3_106_000M1_scaffold_1910_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(22893..24590)
DNA (1698bp) protein (566aa)
NAD-dependent malic enzyme {ECO:0000255|HAMAP-Rule:MF_01619}; Short=NAD-ME {ECO:0000255|HAMAP-Rule:MF_01619};; EC=1.1.1.38 {ECO:0000255|HAMAP-Rule:MF_01619};; TaxID=199310 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC).;"
NAD-dependent malic enzyme n=130 Tax=Escherichia coli RepID=MAO1_ECOL6
sfcA; malate dehydrogenase
L3_106_000M1_scaffold_1910_24
Escherichia sp. KTE52, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(24747..24884)
DNA (138bp) protein (46aa)
Stationary-phase-induced ribosome-associated protein n=1369 Tax=Enterobacteriaceae RepID=SRA_ECO57
rpsV; 30S ribosomal subunit S22
Stationary-phase-induced ribosome-associated protein {ECO:0000313|EMBL:EOV50270.1}; TaxID=1182659 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia sp. KTE52.;"
L3_106_000M1_scaffold_1910_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(24986..25201)
DNA (216bp) protein (72aa)
Protein bdm homolog n=1105 Tax=cellular organisms RepID=BDM_ECO57
Biofilm-dependent modulation protein Bdm, putative
Putative biofilm-dependent modulation protein {ECO:0000313|EMBL:EII21595.1}; TaxID=869686 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 9.0111.;"
L3_106_000M1_scaffold_1910_26
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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25546..25977
DNA (432bp) protein (144aa)
Osmotically inducible, stress-inducible membrane protein n=130 Tax=Escherichia coli RepID=B7URM2_ECO27
osmC; osmotically inducible, stress-inducible membrane protein
OsmC-like family protein {ECO:0000313|EMBL:EHU46741.1}; TaxID=868141 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC2D.;"
L3_106_000M1_scaffold_1910_27
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(26166..28565)
DNA (2400bp) protein (800aa)
dos; heme-regulated cyclic AMP phosphodiesterase (EC:3.1.4.-)
Heme-regulated cyclic AMP phosphodiesterase n=107 Tax=Escherichia coli RepID=E1P9D0_ECOAB
Phosphodiesterase, heme-regulated {ECO:0000313|EMBL:EHU15656.1}; TaxID=868134 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC1B.;"
L3_106_000M1_scaffold_1910_28
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(29132..30451)
DNA (1320bp) protein (440aa)
UPF0748 lipoprotein YddW n=113 Tax=Escherichia coli RepID=YDDW_ECOL6
yddW; lipoprotein YddW
UPF0748 lipoprotein YddW; Flags: Precursor;; TaxID=199310 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC).;"
L3_106_000M1_scaffold_1910_29
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(30582..32117)
DNA (1536bp) protein (512aa)
Probable glutamate/gamma-aminobutyrate antiporter n=150 Tax=Escherichia coli RepID=GADC_ECOL6
xasA; amino acid antiporter
Antiporter {ECO:0000313|EMBL:EZA00511.1}; TaxID=1446551 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O119:H4 str. 03-3458.;"
L3_106_000M1_scaffold_1910_30
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(32273..32365)
DNA (93bp) protein (31aa)
Glutamate decarboxylase {ECO:0000256|RuleBase:RU361171}; EC=4.1.1.15 {ECO:0000256|RuleBase:RU361171};; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
Glutamate decarboxylase n=1 Tax=Escherichia coli ATCC 25922 RepID=R9EDW3_ECOLX
gadB; glutamate decarboxylase
Displaying 30 items

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