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L3_106_000M1_scaffold_2334

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Displaying items 1-30 of 34 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_106_000M1_scaffold_2334_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(29..592)
DNA (564bp) protein (188aa)
Type 1 fimbriae regulatory protein FimX n=355 Tax=Escherichia RepID=I2FKM0_ECOLX
site-specific recombinase, phage integrase family
Type 1 fimbriae Regulatory protein FimB {ECO:0000313|EMBL:EGI47308.1}; TaxID=656408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli H591.;"
L3_106_000M1_scaffold_2334_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1354..1635
DNA (282bp) protein (94aa)
Uncharacterized protein n=279 Tax=Escherichia RepID=B7MCC9_ECO45
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EQP59197.1}; TaxID=1281011 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 70 (4-2963531).;"
L3_106_000M1_scaffold_2334_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1677..3347)
DNA (1671bp) protein (557aa)
Oxygen-dependent choline dehydrogenase {ECO:0000255|HAMAP-Rule:MF_00750}; Short=CDH {ECO:0000255|HAMAP-Rule:MF_00750};; Short=CHD {ECO:0000255|HAMAP-Rule:MF_00750};; EC=1.1.99.1 {ECO:0000255|HAMAP-Rule:MF_00750};; Betaine aldehyde dehydrogenase {ECO:0000255|HAMAP-Rule:MF_00750}; Short=BADH {ECO:0000255|HAMAP-Rule:MF_00750};; EC=1.2.1.8 {ECO:0000255|HAMAP-Rule:MF_00750};; TaxID=199310 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC).;"
Oxygen-dependent choline dehydrogenase n=74 Tax=Escherichia coli RepID=BETA_ECOL6
betA; choline dehydrogenase
L3_106_000M1_scaffold_2334_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3361..4833)
DNA (1473bp) protein (491aa)
NAD/NADP-dependent betaine aldehyde dehydrogenase {ECO:0000255|HAMAP-Rule:MF_00804}; Short=BADH {ECO:0000255|HAMAP-Rule:MF_00804};; EC=1.2.1.8 {ECO:0000255|HAMAP-Rule:MF_00804};; TaxID=199310 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC).;"
NAD/NADP-dependent betaine aldehyde dehydrogenase n=114 Tax=Escherichia coli RepID=BETB_ECOL6
betB; betaine aldehyde dehydrogenase
L3_106_000M1_scaffold_2334_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4847..5434)
DNA (588bp) protein (196aa)
HTH-type transcriptional regulator BetI n=143 Tax=Escherichia coli RepID=BETI_ECO27
betI; HTH-type transcriptional regulator betI
HTH-type transcriptional regulator BetI {ECO:0000256|HAMAP-Rule:MF_00768}; TaxID=868138 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC2A.;"
L3_106_000M1_scaffold_2334_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5563..7596
DNA (2034bp) protein (678aa)
Choline transport protein n=242 Tax=Escherichia RepID=D2NCX6_ECOS5
High-affinity choline uptake protein BetT {ECO:0000313|EMBL:CDL44361.1}; TaxID=1432559 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ISC41.;"
betT; choline transport protein BetT
L3_106_000M1_scaffold_2334_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8472..9560
DNA (1089bp) protein (363aa)
Uncharacterized protein yahA n=361 Tax=Escherichia RepID=E2QG83_ECOLX
yahA; hypothetical protein
Cyclic di-GMP phosphodiesterase {ECO:0000313|EMBL:CAR01675.1}; TaxID=585035 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O45:K1 (strain S88 / ExPEC).;"
L3_106_000M1_scaffold_2334_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9602..10534)
DNA (933bp) protein (311aa)
Uncharacterized HTH-type transcriptional regulator n=311 Tax=Escherichia RepID=E2QG84_ECOLX
yahB; DNA-binding transcriptional regulator
Bacterial regulatory helix-turn-helix, lysR family protein {ECO:0000313|EMBL:EHU31531.1}; TaxID=868137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC1E.;"
L3_106_000M1_scaffold_2334_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10626..11123)
DNA (498bp) protein (166aa)
Uncharacterized protein n=259 Tax=Escherichia RepID=B7MCD7_ECO45
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE05847.1}; TaxID=364106 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli (strain UTI89 / UPEC).;"
L3_106_000M1_scaffold_2334_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11381..11986
DNA (606bp) protein (202aa)
Ankyrin repeat-containing protein n=148 Tax=Escherichia coli RepID=G7R596_ECOC2
yahD; ankyrin repeat-containing protein
Transcriptional regulator with ankyrin domain-containing protein {ECO:0000313|EMBL:EQP59205.1}; TaxID=1281011 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 70 (4-2963531).;"
L3_106_000M1_scaffold_2334_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12026..12889
DNA (864bp) protein (288aa)
Uncharacterized protein n=113 Tax=Escherichia coli RepID=E1P953_ECOAB
yahE; hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EQP59206.1}; TaxID=1281011 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 70 (4-2963531).;"
L3_106_000M1_scaffold_2334_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12879..14426
DNA (1548bp) protein (516aa)
FdrA-like protein n=103 Tax=Escherichia coli RepID=E1P954_ECOAB
hypothetical protein
Bacterial FdrA family protein {ECO:0000313|EMBL:EFR18545.1}; TaxID=670897 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2362-75.;"
L3_106_000M1_scaffold_2334_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14426..15844
DNA (1419bp) protein (473aa)
Uncharacterized protein n=105 Tax=Escherichia coli RepID=G7R599_ECOC2
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:EGI17795.1}; TaxID=656417 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli M605.;"
L3_106_000M1_scaffold_2334_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15989..16939
DNA (951bp) protein (317aa)
arcC2; Carbamate kinase 2 (EC:2.7.2.2)
Carbamate kinase n=194 Tax=Escherichia RepID=B7MCE2_ECO45
Carbamate kinase {ECO:0000256|PIRNR:PIRNR000723}; TaxID=364106 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli (strain UTI89 / UPEC).;"
L3_106_000M1_scaffold_2334_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16949..18331
DNA (1383bp) protein (461aa)
Deaminase n=114 Tax=Escherichia coli RepID=G7R5A1_ECOC2
yahJ; putative deaminase
Tat (Twin-arginine translocation) pathway signal sequence domain protein {ECO:0000313|EMBL:EHU15786.1}; TaxID=868135 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC1C.;"
L3_106_000M1_scaffold_2334_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18708..19757
DNA (1050bp) protein (350aa)
Putative zinc-binding dehydrogenase {ECO:0000313|EMBL:CKH79444.1}; EC=1.-.-.- {ECO:0000313|EMBL:CKH79444.1};; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
Uncharacterized protein n=108 Tax=Escherichia coli RepID=G7R5A3_ECOC2
yahK; hypothetical protein
L3_106_000M1_scaffold_2334_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20639..21274)
DNA (636bp) protein (212aa)
Uncharacterized protein n=108 Tax=Escherichia coli RepID=G7R5A4_ECOC2
yahN; putative cytochrome subunit of dehydrogenase
Homoserine/Threonine efflux protein {ECO:0000313|EMBL:ELJ76841.1}; TaxID=1169364 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE85.;"
L3_106_000M1_scaffold_2334_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21460..21735
DNA (276bp) protein (92aa)
Uncharacterized protein n=296 Tax=Escherichia RepID=B1LIL4_ECOSM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ELE58674.1}; TaxID=1182682 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE75.;"
L3_106_000M1_scaffold_2334_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21836..23422)
DNA (1587bp) protein (529aa)
Propionate catabolism operon regulatory protein n=105 Tax=Escherichia coli RepID=E1P962_ECOAB
prpR; propionate catabolism operon regulatory protein
Propionate catabolism operon regulatory protein {ECO:0000313|EMBL:EQP59223.1}; TaxID=1281011 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 70 (4-2963531).;"
L3_106_000M1_scaffold_2334_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23661..24551
DNA (891bp) protein (297aa)
Methylisocitrate lyase {ECO:0000256|RuleBase:RU361121}; EC=4.1.3.30 {ECO:0000256|RuleBase:RU361121};; TaxID=1268991 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 908519.;"
PrpB protein n=113 Tax=Escherichia coli RepID=E1P963_ECOAB
prpB; PrpB protein
L3_106_000M1_scaffold_2334_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24711..25880
DNA (1170bp) protein (390aa)
prpC; 2-methylcitrate synthase (EC:2.3.3.5)
Citrate synthase n=137 Tax=Escherichia coli RepID=E1P964_ECOAB
Citrate synthase {ECO:0000256|PIRNR:PIRNR001369}; TaxID=550677 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli B354.;"
L3_106_000M1_scaffold_2334_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25914..27365
DNA (1452bp) protein (484aa)
prpD; 2-methylcitrate dehydratase (EC:4.2.1.79)
2-methylcitrate dehydratase n=188 Tax=Escherichia RepID=A1A825_ECOK1
2-methylcitrate dehydratase {ECO:0000313|EMBL:EQX32753.1}; TaxID=1281200 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli (strain UMEA 3162-1).;"
L3_106_000M1_scaffold_2334_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27405..29291
DNA (1887bp) protein (629aa)
Propionyl-CoA synthetase n=111 Tax=Escherichia coli RepID=E1P966_ECOAB
Propionate-CoA ligase {ECO:0000313|EMBL:ELE58679.1}; TaxID=1182682 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE75.;"
prpE; propionyl-CoA synthetase
L3_106_000M1_scaffold_2334_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29616..30875
DNA (1260bp) protein (420aa)
Cytosine permease n=515 Tax=Escherichia RepID=CODB_ECOL6
codB; cytosine permease
Cytosine permease {ECO:0000313|EMBL:KEN92577.1}; TaxID=1444123 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-222-05_S3_C1.;"
L3_106_000M1_scaffold_2334_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30865..32148
DNA (1284bp) protein (428aa)
Cytosine deaminase n=99 Tax=Escherichia coli RepID=I4S4I7_ECOLX
codA; cytosine deaminase
Cytosine deaminase {ECO:0000313|EMBL:EQP59230.1}; TaxID=1281011 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 70 (4-2963531).;"
L3_106_000M1_scaffold_2334_26
Escherichia coli CAG:4, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(32269..32889)
DNA (621bp) protein (207aa)
Galactoside O-acetyltransferase n=157 Tax=Escherichia coli RepID=G7R5B3_ECOC2
lacA; galactoside O-acetyltransferase
Galactoside O-acetyltransferase {ECO:0000313|EMBL:CDC80260.1}; TaxID=1263075 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia; environmental samples.;" source="Escherichia coli CAG:4.;"
L3_106_000M1_scaffold_2334_27
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32946..34199)
DNA (1254bp) protein (418aa)
Lactose permease n=741 Tax=Enterobacteriaceae RepID=LACY_ECOLI
lacY; galactoside permease
Lactose permease {ECO:0000313|EMBL:EHX36653.1}; TaxID=868191 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC12A.;"
L3_106_000M1_scaffold_2334_28
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(34251..37325)
DNA (3075bp) protein (1025aa)
Beta-galactosidase {ECO:0000255|HAMAP-Rule:MF_01687}; Short=Beta-gal {ECO:0000255|HAMAP-Rule:MF_01687};; EC=3.2.1.23 {ECO:0000255|HAMAP-Rule:MF_01687};; Lactase {ECO:0000255|HAMAP-Rule:MF_01687}; TaxID=199310 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC).;"
Beta-galactosidase n=110 Tax=Escherichia coli RepID=BGAL_ECOL6
lacZ; beta-D-galactosidase
L3_106_000M1_scaffold_2334_29
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(37448..38539)
DNA (1092bp) protein (364aa)
Lac repressor n=175 Tax=Escherichia coli RepID=G7R5B6_ECOC2
lacI; lac repressor
Lac operon repressor {ECO:0000313|EMBL:CDN80740.1}; LacI protein; TaxID=1359206 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ST131.;"
L3_106_000M1_scaffold_2334_30
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

38732..39271
DNA (540bp) protein (180aa)
Uncharacterized protein n=114 Tax=Escherichia coli RepID=Q8FKG4_ECOL6
yaiL; hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KEJ62227.1}; TaxID=1444220 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 3-020-07_S4_C1.;"
Displaying items 1-30 of 34 in total

View Taxonomy