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L3_106_000M1_scaffold_5194

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_106_000M1_scaffold_5194_1

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1..285
DNA (285bp) protein (95aa)
Uncharacterized protein (Fragment) n=1 Tax=Escherichia coli O25b:H4-ST131 str. EC958 RepID=N1N6Q7_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:ETJ45366.1}; Flags: Fragment;; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
hypothetical protein
L3_106_000M1_scaffold_5194_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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261..1064
DNA (804bp) protein (268aa)
dkgB; 2,5-diketo-D-gluconate reductase B (EC:1.1.1.274)
2,5-diketo-D-gluconic acid reductase B {ECO:0000313|EMBL:EZJ46600.1}; EC=1.1.1.274 {ECO:0000313|EMBL:EZJ46600.1};; TaxID=1444258 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-005-03_S4_C3.;"
2,5-diketo-D-gluconic acid reductase B n=323 Tax=Escherichia RepID=E2QFC9_ECOLX
L3_106_000M1_scaffold_5194_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1061..1975)
DNA (915bp) protein (305aa)
Transcriptional regulator, LysR family n=171 Tax=Escherichia RepID=Q0TLC9_ECOL5
yafC; putative transcriptional regulator LYSR-type
Transcriptional regulator {ECO:0000313|EMBL:EQP60003.1}; TaxID=1281011 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 70 (4-2963531).;"
L3_106_000M1_scaffold_5194_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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2192..3016
DNA (825bp) protein (275aa)
UPF0294 protein YafD n=861 Tax=Enterobacteriaceae RepID=A1A7Q0_ECOK1
hypothetical protein
UPF0294 protein YafD {ECO:0000256|HAMAP-Rule:MF_01119}; TaxID=1169364 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE85.;"
L3_106_000M1_scaffold_5194_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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3094..3864
DNA (771bp) protein (257aa)
Uncharacterized protein n=117 Tax=Escherichia coli RepID=G7R2P7_ECOC2
yafE; methyltransferase YafE
Methyltransferase domain protein {ECO:0000313|EMBL:EIH21535.1}; TaxID=869675 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 1.2264.;"
L3_106_000M1_scaffold_5194_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3913..5271)
DNA (1359bp) protein (453aa)
Membrane-bound lytic murein transglycosylase D n=966 Tax=Enterobacteriaceae RepID=MLTD_ECOL6
mltD; membrane-bound lytic murein transglycosylase D
Lytic transglycosylase {ECO:0000313|EMBL:EFF13961.2}; TaxID=550677 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli B354.;"
L3_106_000M1_scaffold_5194_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5343..6098)
DNA (756bp) protein (252aa)
Hydroxyacylglutathione hydrolase {ECO:0000256|HAMAP-Rule:MF_01374, ECO:0000256|SAAS:SAAS00035352}; EC=3.1.2.6 {ECO:0000256|HAMAP-Rule:MF_01374, ECO:0000256|SAAS:SAAS00035352};; Glyoxalase II {ECO:0000256|HAMAP-Rule:MF_01374}; TaxID=656393 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli H299.;"
Hydroxyacylglutathione hydrolase n=123 Tax=Escherichia coli RepID=E1P6M0_ECOAB
gloB; hydroxyacylglutathione hydrolase
L3_106_000M1_scaffold_5194_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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6132..6854
DNA (723bp) protein (241aa)
Uncharacterized protein n=2 Tax=Escherichia coli RepID=D3GS41_ECO44
putative methyltransferase
S-adenosyl-L-methionine-dependent methyltransferase {ECO:0000313|EMBL:ESK42824.1}; TaxID=1281241 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli UMEA 3323-1.;"
L3_106_000M1_scaffold_5194_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6851..7318)
DNA (468bp) protein (156aa)
Ribonuclease H {ECO:0000256|HAMAP-Rule:MF_00042, ECO:0000256|SAAS:SAAS00016437}; Short=RNase H {ECO:0000256|HAMAP-Rule:MF_00042};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00042, ECO:0000256|SAAS:SAAS00016437};; TaxID=656393 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli H299.;"
Ribonuclease H n=122 Tax=Escherichia coli RepID=G7R2Q1_ECOC2
rnhA; ribonuclease H
L3_106_000M1_scaffold_5194_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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7374..8114
DNA (741bp) protein (247aa)
DNA polymerase III subunit epsilon n=2 Tax=Escherichia coli RepID=I4T027_ECOLX
DNA polymerase III subunit epsilon
DNA polymerase III subunit epsilon {ECO:0000313|EMBL:EQN33415.1}; TaxID=1280961 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 6 (3-8296502).;"
L3_106_000M1_scaffold_5194_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8444..8683)
DNA (240bp) protein (80aa)
Uncharacterized protein n=124 Tax=Escherichia coli RepID=E1P6M4_ECOAB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIH21673.1}; TaxID=869675 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 1.2264.;"
L3_106_000M1_scaffold_5194_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8855..9301)
DNA (447bp) protein (149aa)
Uncharacterized protein n=131 Tax=Escherichia coli RepID=E1P6M5_ECOAB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIH21652.1}; TaxID=869675 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 1.2264.;"
L3_106_000M1_scaffold_5194_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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9619..9837
DNA (219bp) protein (73aa)
Uncharacterized protein n=132 Tax=Escherichia coli RepID=G7R2Q5_ECOC2
hypothetical protein
Transposase {ECO:0000313|EMBL:EYZ94408.1}; TaxID=1446551 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O119:H4 str. 03-3458.;"
L3_106_000M1_scaffold_5194_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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9907..10257
DNA (351bp) protein (117aa)
Uncharacterized protein n=125 Tax=Escherichia coli RepID=G7R2Q6_ECOC2
hypothetical protein
IS66 family element, Orf2 protein {ECO:0000313|EMBL:EGI52334.1}; TaxID=656393 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli H299.;"
L3_106_000M1_scaffold_5194_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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10261..10935
DNA (675bp) protein (225aa)
L0015-like protein n=116 Tax=Escherichia coli RepID=Q8VRB4_ECOLX
hypothetical protein
L0015-like protein {ECO:0000313|EMBL:AAL67334.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
L3_106_000M1_scaffold_5194_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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10886..11761
DNA (876bp) protein (292aa)
IS66 family element, transposase domain protein n=19 Tax=Escherichia coli RepID=I2SKL4_ECOLX
IS66 family element, transposase domain protein {ECO:0000313|EMBL:EIH21335.1}; TaxID=869675 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 1.2264.;"
hypothetical protein
L3_106_000M1_scaffold_5194_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(11774..12820)
DNA (1047bp) protein (349aa)
Transposase IS116/IS110/IS902 family protein n=2 Tax=Escherichia coli RepID=H4UKU0_ECOLX
transposase, IS110 family protein
Transposase IS116/IS110/IS902 family protein {ECO:0000313|EMBL:KDZ30147.1}; TaxID=1444137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 3-020-07_S3_C1.;"
L3_106_000M1_scaffold_5194_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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13096..13539
DNA (444bp) protein (148aa)
Lactose phosphotransferase system repressor n=18 Tax=Escherichia coli RepID=T2MSM3_ECOLX
lacR_1; Lactose phosphotransferase system repressor
DeoR-like helix-turn-helix domain protein {ECO:0000313|EMBL:KDZ37368.1}; TaxID=1444137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 3-020-07_S3_C1.;"
L3_106_000M1_scaffold_5194_19
Shigella boydii, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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13584..14309
DNA (726bp) protein (242aa)
Ribokinase n=1 Tax=Escherichia coli HVH 193 (4-3331423) RepID=T7SRM3_ECOLX
hypothetical protein
PfkB carbohydrate kinase family protein {ECO:0000313|EMBL:EIQ33143.1}; TaxID=766138 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella boydii 965-58.;"
L3_106_000M1_scaffold_5194_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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14323..15081
DNA (759bp) protein (253aa)
Uncharacterized protein n=246 Tax=Escherichia RepID=B7NR67_ECO7I
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KEJ58190.1}; TaxID=1444220 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 3-020-07_S4_C1.;"
L3_106_000M1_scaffold_5194_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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15216..16100
DNA (885bp) protein (295aa)
Uncharacterized protein n=16 Tax=Escherichia coli RepID=E1RW94_ECOUM
hypothetical protein
Escherichia coli O25b:H4-ST131 str. EC958 chromosome, complete genome; Putative membrane protein {ECO:0000313|EMBL:CDN82636.1}; TaxID=1359206 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ST131.;"
L3_106_000M1_scaffold_5194_22
Klebsiella pneumoniae, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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16103..17137
DNA (1035bp) protein (345aa)
Puative phophotriesterase n=400 Tax=Escherichia RepID=D2NJS9_ECOS5
phosphotriesterase family protein
Puative phophotriesterase {ECO:0000313|EMBL:CDK71695.1}; TaxID=1432547 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella pneumoniae IS22.;"
L3_106_000M1_scaffold_5194_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(17789..18172)
DNA (384bp) protein (128aa)
Transposase n=3 Tax=Escherichia coli RepID=F4T136_ECOLX
transposase
Transposase {ECO:0000313|EMBL:EFK22659.1}; TaxID=749527 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli (strain MS 21-1).;"
Displaying 23 items

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