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L3_106_000M1_scaffold_187

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Displaying items 1-30 of 147 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_106_000M1_scaffold_187_1
Megamonas funiformis CAG:377, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

234..515
DNA (282bp) protein (94aa)
10 kDa chaperonin n=2 Tax=Megamonas RepID=D4KII8_9FIRM
Co-chaperonin GroES (HSP10)
10 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00580, ECO:0000256|RuleBase:RU000535}; GroES protein {ECO:0000256|HAMAP-Rule:MF_00580}; Protein Cpn10 {ECO:0000256|HAMAP-Rule:MF_00580}; TaxID=1263086 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas; environmental samples.;" source="Megamonas funiformis CAG:377.;"
L3_106_000M1_scaffold_187_2
Megamonas funiformis CAG:377, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

573..2204
DNA (1632bp) protein (544aa)
molecular chaperone GroEL n=1 Tax=Megamonas rupellensis RepID=UPI00036DC246
60 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00600, ECO:0000256|RuleBase:RU000419}; GroEL protein {ECO:0000256|HAMAP-Rule:MF_00600}; Protein Cpn60 {ECO:0000256|HAMAP-Rule:MF_00600}; TaxID=1263086 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas; environmental samples.;" source="Megamonas funiformis CAG:377.;"
chaperonin GroEL
L3_106_000M1_scaffold_187_3
Megamonas funiformis, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

2345..3103
DNA (759bp) protein (253aa)
membrane protein n=1 Tax=Megamonas rupellensis RepID=UPI0003781758
Uncharacterized protein {ECO:0000313|EMBL:EHR38486.1}; TaxID=742816 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas.;" source="Megamonas funiformis YIT 11815.;"
hypothetical protein
L3_106_000M1_scaffold_187_4
Megamonas funiformis CAG:377, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(3127..3498)
DNA (372bp) protein (124aa)
Uncharacterized protein n=2 Tax=Megamonas RepID=R6MG05_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB93216.1}; TaxID=1263086 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas; environmental samples.;" source="Megamonas funiformis CAG:377.;"
conjugal transfer protein
L3_106_000M1_scaffold_187_5
Megamonas funiformis CAG:377, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

3594..3971
DNA (378bp) protein (126aa)
Uncharacterized protein n=1 Tax=Megamonas funiformis CAG:377 RepID=R6M497_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB93215.1}; TaxID=1263086 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas; environmental samples.;" source="Megamonas funiformis CAG:377.;"
putative MerR family transcriptional regulator
L3_106_000M1_scaffold_187_6
Megamonas hypermegale, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

4075..4692
DNA (618bp) protein (206aa)
Uncharacterized protein n=2 Tax=Megamonas RepID=R6MB95_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL06070.1}; TaxID=657316 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas.;" source="Megamonas hypermegale ART12/1.;"
L3_106_000M1_scaffold_187_7
Megamonas funiformis CAG:377, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

4776..7376
DNA (2601bp) protein (867aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=1263086 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas; environmental samples.;" source="Megamonas funiformis CAG:377.;"
Exonuclease DNA polymerase III epsilon subunit n=1 Tax=Megamonas funiformis CAG:377 RepID=R6M0R6_9FIRM
helicase, UvrD/REP/exonuclease
L3_106_000M1_scaffold_187_8
Megamonas funiformis CAG:377, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

7551..10133
DNA (2583bp) protein (861aa)
Uncharacterized NAD(FAD)-dependent dehydrogenases (EC:1.6.-.-)
Uncharacterized protein n=1 Tax=Megamonas funiformis CAG:377 RepID=R6N5B4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB93212.1}; TaxID=1263086 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas; environmental samples.;" source="Megamonas funiformis CAG:377.;"
L3_106_000M1_scaffold_187_9
Megamonas funiformis CAG:377, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

10331..11080
DNA (750bp) protein (250aa)
hypothetical protein n=1 Tax=Megamonas rupellensis RepID=UPI00037D749D
Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain {ECO:0000313|EMBL:CDB93105.1}; TaxID=1263086 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas; environmental samples.;" source="Megamonas funiformis CAG:377.;"
Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain
L3_106_000M1_scaffold_187_10
Megamonas funiformis, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(11119..11226)
DNA (108bp) protein (36aa)
HxlR family transcriptional regulator n=1 Tax=Megamonas rupellensis RepID=UPI000364006D
Uncharacterized protein {ECO:0000313|EMBL:EHR38391.1}; TaxID=742816 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas.;" source="Megamonas funiformis YIT 11815.;"
HxlR family transcriptional regulator
L3_106_000M1_scaffold_187_11
Megamonas funiformis CAG:377, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(11307..11459)
DNA (153bp) protein (51aa)
Uncharacterized protein n=2 Tax=Megamonas RepID=R6M0I2_9FIRM
Predicted transcriptional regulators
Uncharacterized protein {ECO:0000313|EMBL:CDB93108.1}; TaxID=1263086 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas; environmental samples.;" source="Megamonas funiformis CAG:377.;"
L3_106_000M1_scaffold_187_12
Megamonas funiformis CAG:377, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

11690..12118
DNA (429bp) protein (143aa)
NADPH-dependent FMN reductase n=1 Tax=Megamonas funiformis CAG:377 RepID=R6MB03_9FIRM
NADPH-dependent FMN reductase {ECO:0000313|EMBL:CDB93109.1}; TaxID=1263086 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas; environmental samples.;" source="Megamonas funiformis CAG:377.;"
NADPH-dependent FMN reductase.
L3_106_000M1_scaffold_187_13
Megamonas funiformis CAG:377, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(12166..12618)
DNA (453bp) protein (151aa)
Uncharacterized protein n=1 Tax=Megamonas funiformis CAG:377 RepID=R6N516_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB93112.1}; TaxID=1263086 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas; environmental samples.;" source="Megamonas funiformis CAG:377.;"
Domain of unknown function (DUF955).
L3_106_000M1_scaffold_187_14
Megamonas funiformis CAG:377, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(12622..12783)
DNA (162bp) protein (54aa)
Uncharacterized protein n=2 Tax=Megamonas RepID=R6MB06_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB93114.1}; TaxID=1263086 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas; environmental samples.;" source="Megamonas funiformis CAG:377.;"
hypothetical protein
L3_106_000M1_scaffold_187_15
Megamonas funiformis CAG:377, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

12962..14044
DNA (1083bp) protein (361aa)
gldA; glycerol dehydrogenase GldA (EC:1.1.1.6)
Uncharacterized protein n=1 Tax=Megamonas funiformis CAG:377 RepID=R6M415_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB93115.1}; TaxID=1263086 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas; environmental samples.;" source="Megamonas funiformis CAG:377.;"
L3_106_000M1_scaffold_187_16
Megamonas funiformis CAG:377, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(14096..14599)
DNA (504bp) protein (168aa)
Organic solvent tolerance protein OstA n=1 Tax=Megamonas funiformis CAG:377 RepID=R6MFT3_9FIRM
Organic solvent tolerance protein OstA {ECO:0000313|EMBL:CDB93116.1}; TaxID=1263086 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas; environmental samples.;" source="Megamonas funiformis CAG:377.;"
Organic solvent tolerance protein OstA
L3_106_000M1_scaffold_187_17
Megamonas funiformis CAG:377, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(14592..15476)
DNA (885bp) protein (295aa)
Predicted metal-dependent hydrolase of the TIM-barrel fold n=1 Tax=Megamonas funiformis CAG:377 RepID=R6N522_9FIRM
Predicted metal-dependent hydrolase of the TIM-barrel fold {ECO:0000313|EMBL:CDB93117.1}; TaxID=1263086 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas; environmental samples.;" source="Megamonas funiformis CAG:377.;"
Predicted metal-dependent hydrolase of the TIM-barrel fold
L3_106_000M1_scaffold_187_18
Megamonas funiformis CAG:377, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(15637..16623)
DNA (987bp) protein (329aa)
Predicted dehydrogenases and related proteins n=1 Tax=Megamonas funiformis CAG:377 RepID=R6M0J1_9FIRM
Predicted dehydrogenases and related proteins {ECO:0000313|EMBL:CDB93118.1}; TaxID=1263086 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas; environmental samples.;" source="Megamonas funiformis CAG:377.;"
Predicted dehydrogenases and related proteins
L3_106_000M1_scaffold_187_19
Megamonas funiformis, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(16638..17420)
DNA (783bp) protein (261aa)
Uncharacterized protein n=1 Tax=Megamonas funiformis CAG:377 RepID=R6MB10_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHR38400.1}; TaxID=742816 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas.;" source="Megamonas funiformis YIT 11815.;"
EcsC family protein
L3_106_000M1_scaffold_187_20
Megamonas funiformis CAG:377, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(17513..17932)
DNA (420bp) protein (140aa)
Rrf2 family protein n=3 Tax=Megamonas RepID=H3K6D7_9FIRM
Rrf2 family protein {ECO:0000313|EMBL:CDB93120.1}; TaxID=1263086 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas; environmental samples.;" source="Megamonas funiformis CAG:377.;"
transcriptional regulator, BadM/Rrf2 family
L3_106_000M1_scaffold_187_21
Megamonas funiformis CAG:377, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(18031..19269)
DNA (1239bp) protein (413aa)
HI0933 family flavoprotein n=1 Tax=Megamonas funiformis CAG:377 RepID=R6MFT8_9FIRM
HI0933 family flavoprotein {ECO:0000313|EMBL:CDB93121.1}; TaxID=1263086 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas; environmental samples.;" source="Megamonas funiformis CAG:377.;"
hypothetical protein
L3_106_000M1_scaffold_187_22
Megamonas funiformis CAG:377, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(19269..20000)
DNA (732bp) protein (244aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=1263086 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas; environmental samples.;" source="Megamonas funiformis CAG:377.;"
ribosomal large subunit pseudouridine synthase B (EC:5.4.99.12 5.4.99.-)
Pseudouridine synthase n=1 Tax=Megamonas funiformis YIT 11815 RepID=H3K6D9_9FIRM
L3_106_000M1_scaffold_187_23
Megamonas funiformis CAG:377, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(20114..20986)
DNA (873bp) protein (291aa)
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080, ECO:0000256|SAAS:SAAS00043744}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080, ECO:0000256|SAAS:SAAS00043720};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA pseudouridylate synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA-uridine isomerase {ECO:0000256|HAMAP-Rule:MF_01080}; TaxID=1263086 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas; environmental samples.;" source="Megamonas funiformis CAG:377.;"
hypothetical protein n=1 Tax=Megamonas rupellensis RepID=UPI0003744B30
Pseudouridine synthase
L3_106_000M1_scaffold_187_24
Megamonas funiformis CAG:377, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(20979..21932)
DNA (954bp) protein (318aa)
hypothetical protein n=1 Tax=Megamonas rupellensis RepID=UPI000373FA68
Uncharacterized protein {ECO:0000313|EMBL:CDB93124.1}; TaxID=1263086 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas; environmental samples.;" source="Megamonas funiformis CAG:377.;"
Exopolyphosphatase-related proteins
L3_106_000M1_scaffold_187_25
Megamonas hypermegale, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(21932..22288)
DNA (357bp) protein (119aa)
Ribosome-binding factor A n=3 Tax=Megamonas RepID=D4KIL6_9FIRM
ribosome-binding factor A
Ribosome-binding factor A {ECO:0000256|HAMAP-Rule:MF_00003, ECO:0000256|SAAS:SAAS00023386}; TaxID=657316 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas.;" source="Megamonas hypermegale ART12/1.;"
L3_106_000M1_scaffold_187_26
Megamonas funiformis CAG:377, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(22300..24597)
DNA (2298bp) protein (766aa)
Translation initiation factor IF-2 n=1 Tax=Megamonas funiformis CAG:377 RepID=R6MFU1_9FIRM
Translation initiation factor IF-2 {ECO:0000256|HAMAP-Rule:MF_00100, ECO:0000256|RuleBase:RU000644}; TaxID=1263086 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas; environmental samples.;" source="Megamonas funiformis CAG:377.;"
translation initiation factor IF-2
L3_106_000M1_scaffold_187_27
Megamonas funiformis CAG:377, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(24617..24931)
DNA (315bp) protein (105aa)
Ribosomal protein L7Ae/L30e/S12e/Gadd45 family n=1 Tax=Megamonas funiformis CAG:377 RepID=R6N532_9FIRM
Ribosomal protein L7Ae/L30e/S12e/Gadd45 family {ECO:0000313|EMBL:CDB93127.1}; TaxID=1263086 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas; environmental samples.;" source="Megamonas funiformis CAG:377.;"
Ribosomal protein L7Ae/L30e/S12e/Gadd45 family.
L3_106_000M1_scaffold_187_28
Megamonas funiformis CAG:377, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(24924..25190)
DNA (267bp) protein (89aa)
Predicted nucleic-acid-binding protein implicated in transcription termination n=1 Tax=Megamonas funiformis CAG:377 RepID=R6MB17_9FIRM
Predicted nucleic-acid-binding protein implicated in transcription termination {ECO:0000313|EMBL:CDB93129.1}; TaxID=1263086 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas; environmental samples.;" source="Megamonas funiformis CAG:377.;"
Predicted nucleic-acid-binding protein implicated in transcription termination
L3_106_000M1_scaffold_187_29
Megamonas funiformis CAG:377, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(25210..26325)
DNA (1116bp) protein (372aa)
Transcription termination factor NusA n=3 Tax=Megamonas RepID=H3K6E6_9FIRM
Transcription termination/antitermination protein NusA {ECO:0000256|HAMAP-Rule:MF_00945}; TaxID=1263086 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas; environmental samples.;" source="Megamonas funiformis CAG:377.;"
nusA; putative transcription elongation protein NusA
L3_106_000M1_scaffold_187_30
Megamonas funiformis, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(26354..26800)
DNA (447bp) protein (149aa)
Ribosome maturation factor RimP n=3 Tax=Megamonas RepID=H3K6E7_9FIRM
Ribosome maturation factor RimP {ECO:0000256|HAMAP-Rule:MF_01077, ECO:0000256|SAAS:SAAS00001667}; TaxID=742816 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas.;" source="Megamonas funiformis YIT 11815.;"
Ribosome maturation factor rimP
Displaying items 1-30 of 147 in total

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