ggKbase home page

L3_106_000M1_scaffold_1338

Search features with annotation key words

Displaying items 1-30 of 38 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_106_000M1_scaffold_1338_1
Megamonas funiformis, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

164..370
DNA (207bp) protein (69aa)
Uncharacterized protein n=1 Tax=Megamonas funiformis CAG:377 RepID=R6ML77_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHR35761.1}; TaxID=742816 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas.;" source="Megamonas funiformis YIT 11815.;"
metal dependent phosphohydrolase
L3_106_000M1_scaffold_1338_2
unknown

Not on your lists

486..935
DNA (450bp) protein (150aa)

This feature has no annotations

L3_106_000M1_scaffold_1338_3
unknown

Not on your lists

comp(1271..2125)
DNA (855bp) protein (285aa)

This feature has no annotations

L3_106_000M1_scaffold_1338_4
Megamonas hypermegale, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(2188..3666)
DNA (1479bp) protein (493aa)
Tetratricopeptide repeat n=1 Tax=Megamonas hypermegale ART12/1 RepID=D4KHK2_9FIRM
Tetratricopeptide repeat.
Tetratricopeptide repeat {ECO:0000313|EMBL:CBL05731.1}; TaxID=657316 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas.;" source="Megamonas hypermegale ART12/1.;"
L3_106_000M1_scaffold_1338_5
unknown

Not on your lists

3716..4072
DNA (357bp) protein (119aa)

This feature has no annotations

L3_106_000M1_scaffold_1338_6
Megamonas hypermegale, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(4156..5439)
DNA (1284bp) protein (428aa)
Adenylosuccinate synthetase (EC:6.3.4.4)
Adenylosuccinate synthetase {ECO:0000256|HAMAP-Rule:MF_00011, ECO:0000256|RuleBase:RU000520}; Short=AMPSase {ECO:0000256|HAMAP-Rule:MF_00011};; Short=AdSS {ECO:0000256|HAMAP-Rule:MF_00011};; EC=6.3.4.4 {ECO:0000256|HAMAP-Rule:MF_00011, ECO:0000256|RuleBase:RU000520};; IMP--aspartate ligase {ECO:0000256|HAMAP-Rule:MF_00011}; TaxID=657316 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas.;" source="Megamonas hypermegale ART12/1.;"
Adenylosuccinate synthetase n=1 Tax=Megamonas hypermegale ART12/1 RepID=D4KHK3_9FIRM
L3_106_000M1_scaffold_1338_7
Megamonas hypermegale, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(5482..6777)
DNA (1296bp) protein (432aa)
Adenylosuccinate lyase (EC:4.3.2.2)
Adenylosuccinate lyase {ECO:0000256|RuleBase:RU361172, ECO:0000313|EMBL:CBL05733.1}; Short=ASL {ECO:0000256|RuleBase:RU361172};; EC=4.3.2.2 {ECO:0000256|RuleBase:RU361172, ECO:0000313|EMBL:CBL05733.1};; Adenylosuccinase {ECO:0000256|RuleBase:RU361172}; TaxID=657316 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas.;" source="Megamonas hypermegale ART12/1.;"
Adenylosuccinate lyase n=1 Tax=Megamonas hypermegale ART12/1 RepID=D4KHK4_9FIRM
L3_106_000M1_scaffold_1338_8
Megamonas funiformis CAG:377, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(7022..8359)
DNA (1338bp) protein (446aa)
Replicative DNA helicase n=2 Tax=Megamonas RepID=H3K8X8_9FIRM
Replicative DNA helicase {ECO:0000313|EMBL:CDB95001.1}; TaxID=1263086 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas; environmental samples.;" source="Megamonas funiformis CAG:377.;"
replicative DNA helicase
L3_106_000M1_scaffold_1338_9
Megamonas funiformis, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(8373..10352)
DNA (1980bp) protein (660aa)
ATP-dependent protease, Lon family (EC:3.4.21.53)
Lon family ATP-dependent protease n=1 Tax=Megamonas funiformis YIT 11815 RepID=H3K8X7_9FIRM
Lon family ATP-dependent protease {ECO:0000313|EMBL:EHR35834.1}; TaxID=742816 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas.;" source="Megamonas funiformis YIT 11815.;"
L3_106_000M1_scaffold_1338_10
Megamonas funiformis CAG:377, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


comp(10362..10805)
DNA (444bp) protein (148aa)
hypothetical protein n=1 Tax=Zymophilus raffinosivorans RepID=UPI00037977A6
50S ribosomal protein L9 {ECO:0000256|HAMAP-Rule:MF_00503}; TaxID=1263086 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas; environmental samples.;" source="Megamonas funiformis CAG:377.;"
ribosomal protein L9
L3_106_000M1_scaffold_1338_11
Megamonas hypermegale, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(10777..12786)
DNA (2010bp) protein (670aa)
Predicted signaling protein consisting of a modified GGDEF domain and a DHH domain n=2 Tax=Megamonas RepID=D4KHK8_9FIRM
Predicted signaling protein consisting of a modified GGDEF domain and a DHH domain
Predicted signaling protein consisting of a modified GGDEF domain and a DHH domain {ECO:0000313|EMBL:CBL05737.1}; TaxID=657316 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas.;" source="Megamonas hypermegale ART12/1.;"
L3_106_000M1_scaffold_1338_12
Megamonas funiformis CAG:377, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(12798..13751)
DNA (954bp) protein (318aa)
Uncharacterized protein n=1 Tax=Megamonas funiformis CAG:377 RepID=R6ML94_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB95006.1}; TaxID=1263086 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas; environmental samples.;" source="Megamonas funiformis CAG:377.;"
membrane protein
L3_106_000M1_scaffold_1338_13
Megamonas funiformis CAG:377, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(13886..15040)
DNA (1155bp) protein (385aa)
N-acetylglucosamine-6-phosphate deacetylase {ECO:0000256|PIRNR:PIRNR038994}; EC=3.5.1.25 {ECO:0000256|PIRNR:PIRNR038994};; GlcNAc 6-P deacetylase {ECO:0000256|PIRNR:PIRNR038994}; TaxID=1263086 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas; environmental samples.;" source="Megamonas funiformis CAG:377.;"
N-acetylglucosamine-6-phosphate deacetylase (EC:3.5.1.25)
N-acetylglucosamine-6-phosphate deacetylase n=1 Tax=Megamonas funiformis CAG:377 RepID=R6NAV2_9FIRM
L3_106_000M1_scaffold_1338_14
Megamonas funiformis, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(15033..15464)
DNA (432bp) protein (144aa)
PTS system fructose IIA component family protein (EC:2.7.1.69)
PTS system, mannose/fructose/sorbose family, IIA component n=1 Tax=Megamonas funiformis YIT 11815 RepID=H3K8X2_9FIRM
PTS system, mannose/fructose/sorbose family, IIA component {ECO:0000313|EMBL:EHR35829.1}; TaxID=742816 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas.;" source="Megamonas funiformis YIT 11815.;"
L3_106_000M1_scaffold_1338_15
Megamonas hypermegale, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

15824..16369
DNA (546bp) protein (182aa)
Rubrerythrin n=3 Tax=Megamonas RepID=D4KHL0_9FIRM
Rubrerythrin
Rubrerythrin {ECO:0000313|EMBL:CBL05739.1}; TaxID=657316 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas.;" source="Megamonas hypermegale ART12/1.;"
L3_106_000M1_scaffold_1338_16
Megamonas hypermegale, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

16513..17817
DNA (1305bp) protein (435aa)
Aspartyl aminopeptidase (EC:3.4.11.21)
M18 family aminopeptidase {ECO:0000256|RuleBase:RU004387}; EC=3.4.11.- {ECO:0000256|RuleBase:RU004387};; TaxID=657316 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas.;" source="Megamonas hypermegale ART12/1.;"
M18 family aminopeptidase n=1 Tax=Megamonas hypermegale ART12/1 RepID=D4KHL1_9FIRM
L3_106_000M1_scaffold_1338_17
Megamonas funiformis, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

17836..18783
DNA (948bp) protein (316aa)
Putative uncharacterized protein n=1 Tax=Megamonas funiformis YIT 11815 RepID=H3K8W9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHR35826.1}; TaxID=742816 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas.;" source="Megamonas funiformis YIT 11815.;"
Phosphoglycerate dehydrogenase and related dehydrogenases
L3_106_000M1_scaffold_1338_18
Megamonas hypermegale, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(18834..19208)
DNA (375bp) protein (125aa)
Desulfoferrodoxin ferrous iron-binding domain n=1 Tax=Megamonas hypermegale ART12/1 RepID=D4KHL3_9FIRM
desulfoferrodoxin ferrous iron-binding domain
Desulfoferrodoxin ferrous iron-binding domain {ECO:0000313|EMBL:CBL05742.1}; TaxID=657316 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas.;" source="Megamonas hypermegale ART12/1.;"
L3_106_000M1_scaffold_1338_19
Megamonas funiformis CAG:377, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(19236..21332)
DNA (2097bp) protein (699aa)
Glycogen debranching enzyme GlgX n=1 Tax=Megamonas funiformis CAG:377 RepID=R6NAY1_9FIRM
Glycogen debranching enzyme GlgX {ECO:0000313|EMBL:CDB95042.1}; TaxID=1263086 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas; environmental samples.;" source="Megamonas funiformis CAG:377.;"
Type II secretory pathway, pullulanase PulA and related glycosidases
L3_106_000M1_scaffold_1338_20
Megamonas funiformis CAG:377, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(21345..21686)
DNA (342bp) protein (114aa)
Anti-anti-sigma factor n=1 Tax=Megamonas funiformis CAG:377 RepID=R6MGE8_9FIRM
Anti-anti-sigma factor {ECO:0000313|EMBL:CDB95039.1}; TaxID=1263086 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas; environmental samples.;" source="Megamonas funiformis CAG:377.;"
anti-sigma-factor antagonist
L3_106_000M1_scaffold_1338_21
Megamonas hypermegale, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(22050..23954)
DNA (1905bp) protein (635aa)
Putative uncharacterized protein n=1 Tax=Megamonas hypermegale ART12/1 RepID=D4KHL6_9FIRM
PTS system D-fructose-specific IIA component (F1P-forming), Frc family (TC 4.A.2.1.4)/PTS system D-fructose-specific IIB component (F1P-forming), Frc family (TC 4.A.2.1.4)/PTS system D-fructose-specific IIC component (F1P-forming), Frc family (TC 4.A.2.1.4)
Uncharacterized protein {ECO:0000313|EMBL:CBL05745.1}; TaxID=657316 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas.;" source="Megamonas hypermegale ART12/1.;"
L3_106_000M1_scaffold_1338_22
Megamonas hypermegale, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(23992..24903)
DNA (912bp) protein (304aa)
fructose-1-phosphate kinase (EC:2.7.1.56)
Tagatose-6-phosphate kinase {ECO:0000256|PIRNR:PIRNR000535}; EC=2.7.1.144 {ECO:0000256|PIRNR:PIRNR000535};; TaxID=657316 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas.;" source="Megamonas hypermegale ART12/1.;"
Tagatose-6-phosphate kinase n=1 Tax=Megamonas hypermegale ART12/1 RepID=D4KHL7_9FIRM
L3_106_000M1_scaffold_1338_23
Megamonas hypermegale, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(24904..25647)
DNA (744bp) protein (248aa)
Transcriptional regulators of sugar metabolism n=2 Tax=Megamonas RepID=D4KHL8_9FIRM
Transcriptional regulators of sugar metabolism
Transcriptional regulators of sugar metabolism {ECO:0000313|EMBL:CBL05747.1}; TaxID=657316 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas.;" source="Megamonas hypermegale ART12/1.;"
L3_106_000M1_scaffold_1338_24
Megamonas funiformis, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

25836..26696
DNA (861bp) protein (287aa)
Putative uncharacterized protein n=1 Tax=Megamonas funiformis YIT 11815 RepID=H3K8W2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHR35819.1}; TaxID=742816 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas.;" source="Megamonas funiformis YIT 11815.;"
hypothetical protein
L3_106_000M1_scaffold_1338_25
Megamonas funiformis, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

27013..28119
DNA (1107bp) protein (369aa)
putative uptake hydrogenase small subunit (EC:1.12.99.6)
Hydrogenase (NiFe) small subunit (HydA) n=2 Tax=Megamonas RepID=H3K8W1_9FIRM
Hydrogenase (NiFe) small subunit (HydA) {ECO:0000313|EMBL:EHR35818.1}; TaxID=742816 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas.;" source="Megamonas funiformis YIT 11815.;"
L3_106_000M1_scaffold_1338_26
Megamonas funiformis, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

28126..30027
DNA (1902bp) protein (634aa)
Ni,Fe-hydrogenase I large subunit (EC:1.12.99.6)
Ni,Fe-hydrogenase I large subunit n=3 Tax=Megamonas RepID=D4KHL9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHR35817.1}; TaxID=742816 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas.;" source="Megamonas funiformis YIT 11815.;"
L3_106_000M1_scaffold_1338_27
Megamonas funiformis, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

30020..30751
DNA (732bp) protein (244aa)
Ni/Fe-hydrogenase, b-type cytochrome subunit n=1 Tax=Megamonas funiformis YIT 11815 RepID=H3K8V9_9FIRM
Ni/Fe-hydrogenase, b-type cytochrome subunit {ECO:0000313|EMBL:EHR35816.1}; TaxID=742816 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas.;" source="Megamonas funiformis YIT 11815.;"
Ni,Fe-hydrogenase I cytochrome b subunit
L3_106_000M1_scaffold_1338_28
Megamonas funiformis CAG:377, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

30767..31009
DNA (243bp) protein (81aa)
Uncharacterized protein n=2 Tax=Megamonas RepID=R6MR96_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDB98439.1}; TaxID=1263086 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas; environmental samples.;" source="Megamonas funiformis CAG:377.;"
L3_106_000M1_scaffold_1338_29
Megamonas funiformis CAG:377, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

31060..31401
DNA (342bp) protein (114aa)
Probable hydrogenase nickel incorporation protein HypA n=3 Tax=Megamonas RepID=D4KHM2_9FIRM
hydrogenase nickel insertion protein HypA
Probable hydrogenase nickel incorporation protein HypA {ECO:0000256|HAMAP-Rule:MF_00213}; TaxID=1263086 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas; environmental samples.;" source="Megamonas funiformis CAG:377.;"
L3_106_000M1_scaffold_1338_30
Megamonas funiformis CAG:377, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

31402..32076
DNA (675bp) protein (225aa)
Hydrogenase accessory protein HypB n=1 Tax=Megamonas funiformis CAG:377 RepID=R6MRA3_9FIRM
Hydrogenase accessory protein HypB {ECO:0000313|EMBL:CDB98444.1}; TaxID=1263086 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas; environmental samples.;" source="Megamonas funiformis CAG:377.;"
hydrogenase accessory protein HypB
Displaying items 1-30 of 38 in total

View Taxonomy