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L3_106_000M1_scaffold_1960

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Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_106_000M1_scaffold_1960_1
Megamonas funiformis CAG:377, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

201..1466
DNA (1266bp) protein (422aa)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344}; EC=2.5.1.7 {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344};; Enoylpyruvate transferase {ECO:0000256|HAMAP-Rule:MF_00111}; UDP-N-acetylglucosamine enolpyruvyl transferase {ECO:0000256|HAMAP-Rule:MF_00111}; TaxID=1263086 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas; environmental samples.;" source="Megamonas funiformis CAG:377.;"
murA; putative UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC:2.5.1.7)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase n=1 Tax=Megamonas funiformis CAG:377 RepID=R6MCY0_9FIRM
L3_106_000M1_scaffold_1960_2
Megamonas funiformis CAG:377, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

1543..1755
DNA (213bp) protein (71aa)
Uncharacterized protein n=1 Tax=Megamonas funiformis CAG:377 RepID=R6MKD7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB96459.1}; TaxID=1263086 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas; environmental samples.;" source="Megamonas funiformis CAG:377.;"
4Fe-4S ferredoxin iron-sulfur binding domain-containing protein
L3_106_000M1_scaffold_1960_3
Megamonas hypermegale, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

1813..2073
DNA (261bp) protein (87aa)
Uncharacterized protein n=2 Tax=Megamonas RepID=R6MA03_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL05699.1}; TaxID=657316 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas.;" source="Megamonas hypermegale ART12/1.;"
L3_106_000M1_scaffold_1960_4
Megamonas funiformis CAG:377, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

2109..2555
DNA (447bp) protein (149aa)
Uncharacterized protein n=1 Tax=Megamonas funiformis CAG:377 RepID=R6NF60_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB96457.1}; TaxID=1263086 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas; environmental samples.;" source="Megamonas funiformis CAG:377.;"
hypothetical protein
L3_106_000M1_scaffold_1960_5
Megamonas funiformis CAG:377, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


comp(2690..2923)
DNA (234bp) protein (78aa)
30S ribosomal protein S18 n=2 Tax=Megamonas RepID=H3K918_9FIRM
30S ribosomal protein S18 {ECO:0000256|HAMAP-Rule:MF_00270}; TaxID=1263086 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas; environmental samples.;" source="Megamonas funiformis CAG:377.;"
rpsR; putative 30S ribosomal protein S18
L3_106_000M1_scaffold_1960_6
Megamonas hypermegale, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(2938..3384)
DNA (447bp) protein (149aa)
Single-stranded DNA-binding protein n=2 Tax=Megamonas RepID=D4KHG9_9FIRM
single-strand binding protein
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|PIRNR:PIRNR002070}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=657316 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas.;" source="Megamonas hypermegale ART12/1.;"
L3_106_000M1_scaffold_1960_7
Megamonas funiformis CAG:377, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


comp(3415..3702)
DNA (288bp) protein (96aa)
30S ribosomal protein S6 n=1 Tax=Megamonas funiformis YIT 11815 RepID=H3K920_9FIRM
30S ribosomal protein S6 {ECO:0000256|HAMAP-Rule:MF_00360, ECO:0000256|SAAS:SAAS00020539}; TaxID=1263086 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas; environmental samples.;" source="Megamonas funiformis CAG:377.;"
SSU ribosomal protein S6P
L3_106_000M1_scaffold_1960_8
Megamonas funiformis CAG:377, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(3823..5184)
DNA (1362bp) protein (454aa)
Arabinose efflux permease n=1 Tax=Megamonas funiformis CAG:377 RepID=R6NF49_9FIRM
Arabinose efflux permease {ECO:0000313|EMBL:CDB96447.1}; TaxID=1263086 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas; environmental samples.;" source="Megamonas funiformis CAG:377.;"
Arabinose efflux permease
L3_106_000M1_scaffold_1960_9
Megamonas hypermegale, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(5285..5542)
DNA (258bp) protein (86aa)
Putative uncharacterized protein n=2 Tax=Megamonas RepID=D4KHG6_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL05695.1}; TaxID=657316 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas.;" source="Megamonas hypermegale ART12/1.;"
L3_106_000M1_scaffold_1960_10
Megamonas funiformis CAG:377, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(5721..6833)
DNA (1113bp) protein (371aa)
Leucyl aminopeptidase (aminopeptidase T) (EC:3.4.11.-)
Leucyl aminopeptidase (Aminopeptidase T) n=1 Tax=Megamonas funiformis CAG:377 RepID=R6MKB2_9FIRM
Leucyl aminopeptidase (Aminopeptidase T) {ECO:0000313|EMBL:CDB96439.1}; TaxID=1263086 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas; environmental samples.;" source="Megamonas funiformis CAG:377.;"
L3_106_000M1_scaffold_1960_11
Megamonas funiformis CAG:377, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

7284..8615
DNA (1332bp) protein (444aa)
MFS transporter n=1 Tax=Megamonas rupellensis RepID=UPI00037968A1
Uncharacterized protein {ECO:0000313|EMBL:CDB96435.1}; TaxID=1263086 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas; environmental samples.;" source="Megamonas funiformis CAG:377.;"
major facilitator superfamily MFS_1
L3_106_000M1_scaffold_1960_12
Megamonas funiformis CAG:377, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(8675..9340)
DNA (666bp) protein (222aa)
Ribulose-phosphate 3-epimerase {ECO:0000256|PIRNR:PIRNR001461}; EC=5.1.3.1 {ECO:0000256|PIRNR:PIRNR001461};; TaxID=1263086 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas; environmental samples.;" source="Megamonas funiformis CAG:377.;"
ribulose-phosphate 3-epimerase n=1 Tax=Megamonas rupellensis RepID=UPI00036865B7
rpe; ribulose-5-phosphate 3-epimerase
L3_106_000M1_scaffold_1960_13
Megamonas funiformis, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

9514..10725
DNA (1212bp) protein (404aa)
MFS transporter n=1 Tax=Megamonas rupellensis RepID=UPI000369AF78
Uncharacterized protein {ECO:0000313|EMBL:EHR35578.1}; TaxID=742816 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas.;" source="Megamonas funiformis YIT 11815.;"
Arabinose efflux permease
L3_106_000M1_scaffold_1960_14
Megamonas funiformis CAG:377, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(10790..13858)
DNA (3069bp) protein (1023aa)
Uncharacterized protein n=1 Tax=Megamonas funiformis CAG:377 RepID=R6M9W5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB96423.1}; TaxID=1263086 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas; environmental samples.;" source="Megamonas funiformis CAG:377.;"
RND transporter
L3_106_000M1_scaffold_1960_15
Megamonas funiformis, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(13855..14937)
DNA (1083bp) protein (361aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=Megamonas funiformis YIT 11815 RepID=H3K928_9FIRM
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:EHR35580.1}; TaxID=742816 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas.;" source="Megamonas funiformis YIT 11815.;"
putative HlyD family secretion protein
L3_106_000M1_scaffold_1960_16
Megamonas hypermegale, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(15140..15772)
DNA (633bp) protein (211aa)
Transcriptional regulator n=1 Tax=Megamonas hypermegale ART12/1 RepID=D4KHF8_9FIRM
Transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:CBL05687.1}; TaxID=657316 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas.;" source="Megamonas hypermegale ART12/1.;"
L3_106_000M1_scaffold_1960_17
Megamonas hypermegale, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(15914..17338)
DNA (1425bp) protein (475aa)
biotin carboxylase/acetyl-CoA carboxylase carboxyltransferase subunit alpha (EC:6.4.1.2 6.3.4.14)
Biotin carboxylase /acetyl-CoA carboxylase carboxyltransferase subunit alpha {ECO:0000313|EMBL:CBL05686.1}; EC=6.3.4.14 {ECO:0000313|EMBL:CBL05686.1};; EC=6.4.1.2 {ECO:0000313|EMBL:CBL05686.1};; TaxID=657316 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas.;" source="Megamonas hypermegale ART12/1.;"
Biotin carboxylase /acetyl-CoA carboxylase carboxyltransferase subunit alpha n=3 Tax=Megamonas RepID=D4KHF7_9FIRM
L3_106_000M1_scaffold_1960_18
Megamonas funiformis, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

17659..18366
DNA (708bp) protein (236aa)
hydrolase n=1 Tax=Megamonas rupellensis RepID=UPI00037FA38F
Uncharacterized protein {ECO:0000313|EMBL:EHR35583.1}; TaxID=742816 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas.;" source="Megamonas funiformis YIT 11815.;"
putative hydrolase
L3_106_000M1_scaffold_1960_19
Megamonas funiformis CAG:377, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(18483..19382)
DNA (900bp) protein (300aa)
Uncharacterized protein n=1 Tax=Megamonas funiformis CAG:377 RepID=R6NEZ3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB96402.1}; TaxID=1263086 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas; environmental samples.;" source="Megamonas funiformis CAG:377.;"
hypothetical protein
L3_106_000M1_scaffold_1960_20
Megamonas funiformis CAG:377, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(19426..20535)
DNA (1110bp) protein (370aa)
recombinase RecF n=1 Tax=Megamonas rupellensis RepID=UPI00035EF366
DNA replication and repair protein RecF {ECO:0000256|HAMAP-Rule:MF_00365, ECO:0000256|RuleBase:RU000578}; TaxID=1263086 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas; environmental samples.;" source="Megamonas funiformis CAG:377.;"
hypothetical protein
L3_106_000M1_scaffold_1960_21
Megamonas funiformis CAG:377, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(20541..21659)
DNA (1119bp) protein (373aa)
DNA polymerase III subunit beta {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018186}; EC=2.7.7.7 {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018259};; TaxID=1263086 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas; environmental samples.;" source="Megamonas funiformis CAG:377.;"
DNA polymerase III, beta subunit (EC:2.7.7.7)
DNA polymerase III subunit beta n=1 Tax=Megamonas rupellensis RepID=UPI00036B6D45
L3_106_000M1_scaffold_1960_22
Megamonas funiformis CAG:377, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(21917..23407)
DNA (1491bp) protein (497aa)
ATPase n=1 Tax=Megamonas rupellensis RepID=UPI00035C44E0
Chromosomal replication initiator protein DnaA {ECO:0000256|HAMAP-Rule:MF_00377, ECO:0000256|SAAS:SAAS00009621}; TaxID=1263086 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas; environmental samples.;" source="Megamonas funiformis CAG:377.;"
chromosomal replication initiator protein DnaA
L3_106_000M1_scaffold_1960_23
Megamonas hypermegale, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

23900..24265
DNA (366bp) protein (122aa)
ribonuclease P protein component, eubacterial (EC:3.1.26.5)
Ribonuclease P protein component {ECO:0000256|HAMAP-Rule:MF_00227, ECO:0000256|SAAS:SAAS00143752}; Short=RNase P protein {ECO:0000256|HAMAP-Rule:MF_00227};; Short=RNaseP protein {ECO:0000256|HAMAP-Rule:MF_00227};; EC=3.1.26.5 {ECO:0000256|HAMAP-Rule:MF_00227, ECO:0000256|SAAS:SAAS00143815};; Protein C5 {ECO:0000256|HAMAP-Rule:MF_00227}; TaxID=657316 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas.;" source="Megamonas hypermegale ART12/1.;"
Ribonuclease P protein component n=2 Tax=Megamonas RepID=D4KHE7_9FIRM
L3_106_000M1_scaffold_1960_24
Megamonas funiformis, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

24262..24471
DNA (210bp) protein (70aa)
Putative membrane protein insertion efficiency factor n=2 Tax=Megamonas RepID=H3K938_9FIRM
Putative membrane protein insertion efficiency factor {ECO:0000256|HAMAP-Rule:MF_00386, ECO:0000256|SAAS:SAAS00100919}; TaxID=742816 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas.;" source="Megamonas funiformis YIT 11815.;"
UPF0161 protein yidD
L3_106_000M1_scaffold_1960_25
Megamonas funiformis CAG:377, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

24529..25209
DNA (681bp) protein (227aa)
YidC/Oxa1 family membrane protein insertase n=2 Tax=Megamonas RepID=H3K939_9FIRM
YidC/Oxa1 family membrane protein insertase {ECO:0000313|EMBL:CDB96378.1}; TaxID=1263086 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas; environmental samples.;" source="Megamonas funiformis CAG:377.;"
membrane protein insertase, YidC/Oxa1 family
L3_106_000M1_scaffold_1960_26
Megamonas hypermegale, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

25213..25866
DNA (654bp) protein (218aa)
Predicted RNA-binding protein n=1 Tax=Megamonas hypermegale ART12/1 RepID=D4KHE6_9FIRM
Predicted RNA-binding protein
Predicted RNA-binding protein {ECO:0000313|EMBL:CBL05675.1}; TaxID=657316 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas.;" source="Megamonas hypermegale ART12/1.;"
L3_106_000M1_scaffold_1960_27
Megamonas funiformis, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

25953..27350
DNA (1398bp) protein (466aa)
tRNA modification GTPase MnmE {ECO:0000256|HAMAP-Rule:MF_00379}; EC=3.6.-.- {ECO:0000256|HAMAP-Rule:MF_00379};; TaxID=742816 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas.;" source="Megamonas funiformis YIT 11815.;"
tRNA modification GTPase MnmE n=1 Tax=Megamonas funiformis YIT 11815 RepID=H3K941_9FIRM
tRNA modification GTPase trmE
L3_106_000M1_scaffold_1960_28
Megamonas funiformis CAG:377, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

27382..29262
DNA (1881bp) protein (627aa)
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG n=1 Tax=Megamonas funiformis CAG:377 RepID=R6MK31_9FIRM
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG {ECO:0000256|HAMAP-Rule:MF_00129}; Glucose-inhibited division protein A {ECO:0000256|HAMAP-Rule:MF_00129}; TaxID=1263086 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas; environmental samples.;" source="Megamonas funiformis CAG:377.;"
mnmG; putative tRNA uridine 5-carboxymethylaminomethyl modification enzyme
L3_106_000M1_scaffold_1960_29
Megamonas funiformis CAG:377, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

29259..29978
DNA (720bp) protein (240aa)
Ribosomal RNA small subunit methyltransferase G {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00095882}; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00277524};; 16S rRNA 7-methylguanosine methyltransferase {ECO:0000256|HAMAP-Rule:MF_00074}; TaxID=1263086 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas; environmental samples.;" source="Megamonas funiformis CAG:377.;"
Ribosomal RNA small subunit methyltransferase G n=1 Tax=Megamonas funiformis CAG:377 RepID=R6NEU9_9FIRM
rsmG; putative ribosomal RNA small subunit methyltransferase G
L3_106_000M1_scaffold_1960_30
Megamonas funiformis CAG:377, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(30030..31118)
DNA (1089bp) protein (363aa)
Uncharacterized protein n=2 Tax=Megamonas RepID=R6MQ45_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB96366.1}; TaxID=1263086 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas; environmental samples.;" source="Megamonas funiformis CAG:377.;"
Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific
Displaying 30 items

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