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L3_106_000M1_scaffold_53

Search features with annotation key words

Displaying items 1-30 of 199 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_106_000M1_scaffold_53_1
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1179..1457)
-----------------
DNA (279bp)
protein (93aa)
integrase n=1 Tax=Clostridiales bacterium NK3B98 RepID=UPI0003B67E5A
Uncharacterized protein {ECO:0000313|EMBL:EOQ38710.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
Phage integrase family.
L3_106_000M1_scaffold_53_2
unknown

Not on your lists

comp(1457..1672)
-----------------
DNA (216bp)
protein (72aa)

This feature has no annotations

L3_106_000M1_scaffold_53_3
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1806..2000)
-----------------
DNA (195bp)
protein (65aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6H277_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB27546.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
hypothetical protein
L3_106_000M1_scaffold_53_4
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

Not on your lists

comp(2040..2564)
-----------------
DNA (525bp)
protein (175aa)
Phage integrase n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5S5E7_9FIRM
Phage integrase {ECO:0000313|EMBL:CCZ46009.1}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
integrase
L3_106_000M1_scaffold_53_5
unknown

Not on your lists

comp(2745..2882)
-----------------
DNA (138bp)
protein (46aa)

This feature has no annotations

L3_106_000M1_scaffold_53_6
unknown

Not on your lists

2935..3537
-----------------
DNA (603bp)
protein (201aa)

This feature has no annotations

L3_106_000M1_scaffold_53_7
unknown

Not on your lists

comp(3966..4193)
-----------------
DNA (228bp)
protein (76aa)

This feature has no annotations

L3_106_000M1_scaffold_53_8
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4336..5001
-----------------
DNA (666bp)
protein (222aa)
transposase n=1 Tax=[Streptococcus] pleomorphus RepID=UPI0003B42473
Transposase, Mutator family {ECO:0000313|EMBL:EDM97648.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
transposase mutator type
L3_106_000M1_scaffold_53_9
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5888..7000)
-----------------
DNA (1113bp)
protein (371aa)
Uncharacterized protein n=1 Tax=Clostridium bolteae 90B8 RepID=N9Z4N9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ34650.1}; TaxID=997897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90B8.;"
ROK family protein
L3_106_000M1_scaffold_53_10
Paenibacillus dendritiformis, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

7331..8449
-----------------
DNA (1119bp)
protein (373aa)
ethanolamine utilization protein EutH n=1 Tax=Paenibacillus sp. OSY-SE RepID=UPI00030F5149
Ethanolamine utilization protein EutH {ECO:0000313|EMBL:EHQ62099.1}; TaxID=1131935 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus dendritiformis C454.;"
ethanolamine utilization protein EutH
L3_106_000M1_scaffold_53_11
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8506..9321
-----------------
DNA (816bp)
protein (272aa)
Putative sgc region protein SgcQ n=4 Tax=Clostridium RepID=U2BZ10_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA95397.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
conserved hypothetical protein TIGR00259
L3_106_000M1_scaffold_53_12
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9351..10871
-----------------
DNA (1521bp)
protein (507aa)
Sugar kinase n=2 Tax=Clostridium symbiosum RepID=E7GIB8_CLOSY
Sugar kinase {ECO:0000313|EMBL:EGA95396.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
Carbohydrate kinase, FGGY
L3_106_000M1_scaffold_53_13
Paenibacillus macerans, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

10898..11734
-----------------
DNA (837bp)
protein (279aa)
hypothetical protein n=1 Tax=Paenibacillus sp. JC66 RepID=UPI000289E024
Xylose isomerase-like TIM barrel family protein {ECO:0000313|EMBL:KFN05786.1}; TaxID=44252 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus macerans (Bacillus macerans).;"
hypothetical protein
L3_106_000M1_scaffold_53_14
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11801..13318)
-----------------
DNA (1518bp)
protein (506aa)
Xylulose kinase n=1 Tax=Clostridium sp. CAG:226 RepID=R5B382_9CLOT
Xylulose kinase {ECO:0000313|EMBL:CCX50005.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
xylulose kinase
L3_106_000M1_scaffold_53_15
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13734..15101
-----------------
DNA (1368bp)
protein (456aa)
Putative sodium/glutamate symporter n=1 Tax=Clostridium symbiosum ATCC 14940 RepID=U2D2U7_CLOSY
Putative sodium/glutamate symporter {ECO:0000313|EMBL:ERI75807.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
sodium/glutamate symporter
L3_106_000M1_scaffold_53_16
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15204..16331
-----------------
DNA (1128bp)
protein (376aa)
ornithine cyclodeaminase (EC:4.3.1.12)
Putative ornithine cyclodeaminase n=1 Tax=Clostridium symbiosum WAL-14673 RepID=E9SRG3_CLOSY
Ornithine cyclodeaminase {ECO:0000313|EMBL:EGA91689.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
L3_106_000M1_scaffold_53_17
unknown

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16479..16679
-----------------
DNA (201bp)
protein (67aa)

This feature has no annotations

L3_106_000M1_scaffold_53_18
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16700..17119
-----------------
DNA (420bp)
protein (140aa)
Putative membrane protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NTH2_9FIRM
Putative membrane protein {ECO:0000313|EMBL:EDN00735.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
Predicted permease, DMT superfamily
L3_106_000M1_scaffold_53_19
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17110..17364
-----------------
DNA (255bp)
protein (85aa)
Putative membrane protein n=1 Tax=Dorea formicigenerans ATCC 27755 RepID=B0G5V2_9FIRM
Putative membrane protein {ECO:0000313|EMBL:EDR47152.1}; TaxID=411461 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans ATCC 27755.;"
hypothetical protein
L3_106_000M1_scaffold_53_20
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17394..18314
-----------------
DNA (921bp)
protein (307aa)
Glucosamine-6-phosphate isomerase/6-phosphogluconolactonase n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0CUU6_9CLOT
Glucosamine-6-phosphate isomerase/6-phosphogluconolactonase {ECO:0000313|EMBL:EEG57145.1}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
glucosamine/galactosamine-6-phosphate isomerase
L3_106_000M1_scaffold_53_21
Bacillus bataviensis, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

18316..19248
-----------------
DNA (933bp)
protein (311aa)
Ribokinase (EC:2.7.1.15)
Ribokinase n=1 Tax=Bacillus bataviensis LMG 21833 RepID=K6DNR1_9BACI
Ribokinase {ECO:0000313|EMBL:EKN69954.1}; TaxID=1117379 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus bataviensis LMG 21833.;"
L3_106_000M1_scaffold_53_22
unknown

Not on your lists

19372..19542
-----------------
DNA (171bp)
protein (57aa)

This feature has no annotations

L3_106_000M1_scaffold_53_23
unknown

Not on your lists

20081..20323
-----------------
DNA (243bp)
protein (81aa)

This feature has no annotations

L3_106_000M1_scaffold_53_24
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20342..21220
-----------------
DNA (879bp)
protein (293aa)
Uncharacterized protein n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8W4Q5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOQ39699.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
transposase
L3_106_000M1_scaffold_53_25
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21298..21606
-----------------
DNA (309bp)
protein (103aa)
Uncharacterized protein n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8W499_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOQ39698.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
L3_106_000M1_scaffold_53_26
unknown

Not on your lists

21952..22374
-----------------
DNA (423bp)
protein (141aa)

This feature has no annotations

L3_106_000M1_scaffold_53_27
unknown

Not on your lists

22349..22825
-----------------
DNA (477bp)
protein (159aa)

This feature has no annotations

L3_106_000M1_scaffold_53_28
Firmicutes bacterium ASF500, Firmicutes, Bacteria

Not on your lists

23360..24136
-----------------
DNA (777bp)
protein (259aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium ASF500 RepID=V2Y8I6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ESL12703.1}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
putative surface layer protein
L3_106_000M1_scaffold_53_29
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24558..24827)
-----------------
DNA (270bp)
protein (90aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CJQ4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO26905.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
putative site-specific recombinase
L3_106_000M1_scaffold_53_30
unknown

Not on your lists

25133..25267
-----------------
DNA (135bp)
protein (45aa)

This feature has no annotations

Displaying items 1-30 of 199 in total

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