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L3_106_000M1_scaffold_397

Search features with annotation key words

Displaying items 1-30 of 94 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_106_000M1_scaffold_397_1
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(130..1221)
DNA (1092bp) protein (364aa)
Carbohydrate diacid regulator n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XAR0_9FIRM
Carbohydrate diacid regulator {ECO:0000313|EMBL:EGJ47438.2}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
hypothetical protein
L3_106_000M1_scaffold_397_2
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1329..2054)
DNA (726bp) protein (242aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
rsuA; pseudouridine synthase RsuA (EC:5.4.99.-)
Pseudouridine synthase n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XAQ9_9FIRM
L3_106_000M1_scaffold_397_3
Firmicutes bacterium ASF500, Firmicutes, Bacteria

Not on your lists

2240..2716
DNA (477bp) protein (159aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium ASF500 RepID=V2XVK4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ESL13674.1}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
hypothetical protein
L3_106_000M1_scaffold_397_4
Firmicutes bacterium ASF500, Firmicutes, Bacteria

Not on your lists

comp(2757..3581)
DNA (825bp) protein (275aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium ASF500 RepID=V2YBC8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ESL13673.1}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
putative small-conductance mechanosensitive channel
L3_106_000M1_scaffold_397_5
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3865..5172
DNA (1308bp) protein (436aa)
MATE efflux family protein n=1 Tax=Clostridium sp. CAG:678 RepID=R5KZP1_9CLOT
MATE efflux family protein {ECO:0000313|EMBL:EGN41643.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
MATE efflux family protein
L3_106_000M1_scaffold_397_6
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5217..6248)
DNA (1032bp) protein (344aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XDB4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ46810.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
mreB; rod shape-determining protein MreB
L3_106_000M1_scaffold_397_7
Firmicutes bacterium ASF500, Firmicutes, Bacteria

Not on your lists

comp(6388..7077)
DNA (690bp) protein (230aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium ASF500 RepID=V2YER1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ESL13671.1}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
hypothetical protein
L3_106_000M1_scaffold_397_8
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7074..7250)
DNA (177bp) protein (59aa)
Uncharacterized protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NZ79_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM98728.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
hypothetical protein
L3_106_000M1_scaffold_397_9
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7682..8881
DNA (1200bp) protein (400aa)
phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic (EC:6.3.2.5)
Phosphopantothenoylcysteine decarboxylase/phosphopantothenate-cysteine ligase n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XDB0_9FIRM
Phosphopantothenoylcysteine decarboxylase/phosphopantothenate-cysteine ligase {ECO:0000313|EMBL:EGJ46806.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
L3_106_000M1_scaffold_397_10
Bacillus subterraneus, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(9508..10530)
DNA (1023bp) protein (341aa)
Putative uncharacterized protein n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5IJ61_9CLOT
Transcriptional regulator {ECO:0000313|EMBL:KIY23115.1}; TaxID=285983 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus subterraneus.;"
Transcriptional regulators
L3_106_000M1_scaffold_397_11
BJP_IG2069_Desfulfarculales_53_13, Desulfarculales, Deltaproteobacteria, Proteobacteria, Bacteria

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10886..12841
DNA (1956bp) protein (652aa)
hypothetical protein n=1 Tax=Candidatus Poribacteria sp. WGA-4E RepID=UPI0003696EEA
type I phosphodiesterase/nucleotide pyrophosphatase
Tax=BJP_IG2069_Desfulfarculales_53_13
L3_106_000M1_scaffold_397_12
Spirochaeta sp. JC202, Spirochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

12816..13730
DNA (915bp) protein (305aa)
3-hydroxyisobutyrate dehydrogenase (EC:1.1.1.31)
Putative uncharacterized protein n=1 Tax=Bilophila sp. 4_1_30 RepID=G1V6B3_9DELT
Uncharacterized protein {ECO:0000313|EMBL:KGM38435.1}; TaxID=1329640 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Spirochaeta.;" source="Spirochaeta sp. JC202.;"
L3_106_000M1_scaffold_397_13
Firmicutes bacterium CAG:110, Firmicutes, Bacteria

Not on your lists

13776..15257
DNA (1482bp) protein (494aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:110 RepID=R5EBM6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX90025.1}; TaxID=1263000 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:110.;"
Uncharacterized conserved protein (DUF2088).
L3_106_000M1_scaffold_397_14
Desulfovibrio sp. TomC, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15226..16563
DNA (1338bp) protein (446aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1C894_9FIRM
Alkanesulfonates-binding protein {ECO:0000313|EMBL:KHK01719.1}; TaxID=1562888 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. TomC.;"
nitrate/sulfonate/bicarbonate ABC transporter substrate-binding protein
L3_106_000M1_scaffold_397_15
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16739..17575
DNA (837bp) protein (279aa)
ABC transporter, permease protein n=2 Tax=Clostridiales RepID=U2BXA9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KGF57405.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
binding-protein-dependent transport system inner membrane protein
L3_106_000M1_scaffold_397_16
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17577..18389
DNA (813bp) protein (271aa)
ABC transporter, permease protein n=2 Tax=Clostridiales RepID=U2DBH0_9CLOT
ABC transporter, permease protein {ECO:0000313|EMBL:ERI76871.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
tauC; nitrate/sulfonate/taurine/bicarbonate ABC transporter permease
L3_106_000M1_scaffold_397_17
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18368..19135
DNA (768bp) protein (256aa)
ABC transporter, ATP-binding protein n=2 Tax=Clostridiales RepID=G9YVD1_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:ERI76872.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
ABC transporter
L3_106_000M1_scaffold_397_18
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19151..19897
DNA (747bp) protein (249aa)
ABC transporter, ATP-binding protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2BYH6_9CLOT
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:ERI76873.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
ssuB; ABC transporter ATP-binding protein
L3_106_000M1_scaffold_397_19
[Clostridium] termitidis, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19968..20714
DNA (747bp) protein (249aa)
Sulfite exporter TauE/SafE n=1 Tax=Clostridium termitidis CT1112 RepID=S0FEX6_9CLOT
Sulfite exporter TauE/SafE {ECO:0000313|EMBL:EMS68990.1}; TaxID=1195236 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] termitidis CT1112.;"
hypothetical protein
L3_106_000M1_scaffold_397_20
Firmicutes bacterium CAG:137, Firmicutes, Bacteria

Not on your lists

comp(21156..21467)
DNA (312bp) protein (104aa)
Methylated-DNA-[protein]-cysteine S-methyltransferase n=1 Tax=Firmicutes bacterium CAG:137 RepID=R6H946_9FIRM
Methylated-DNA-[protein]-cysteine S-methyltransferase {ECO:0000313|EMBL:CDB30031.1}; TaxID=1263004 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:137.;"
hypothetical protein
L3_106_000M1_scaffold_397_21
Firmicutes bacterium ASF500, Firmicutes, Bacteria

Not on your lists

21638..22651
DNA (1014bp) protein (338aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium ASF500 RepID=V2YJW3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ESL15511.1}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
aldo/keto reductase
L3_106_000M1_scaffold_397_22
unknown

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23406..23615
DNA (210bp) protein (70aa)

This feature has no annotations

L3_106_000M1_scaffold_397_23
Clostridium sp. CAG:58, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24004..24789
DNA (786bp) protein (262aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:58 RepID=R6RMV0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC50248.1}; TaxID=1262824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:58.;"
conserved hypothetical protein TIGR00370
L3_106_000M1_scaffold_397_24
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24791..25804
DNA (1014bp) protein (338aa)
Allophanate hydrolase n=1 Tax=Clostridium symbiosum WAL-14163 RepID=E7GHJ6_CLOSY
Allophanate hydrolase {ECO:0000313|EMBL:EGA95656.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
biotin-dependent carboxylase uncharacterized domain
L3_106_000M1_scaffold_397_25
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26055..26816
DNA (762bp) protein (254aa)
UPF0271 protein CLOBOL_02633 n=4 Tax=Clostridium bolteae RepID=A8RQ21_9CLOT
UPF0271 protein HMPREF1082_05255 {ECO:0000256|HAMAP-Rule:MF_00691}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
Uncharacterized proteins, homologs of lactam utilization protein B
L3_106_000M1_scaffold_397_26
Cloacibacillus evryensis, Cloacibacillus, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

26835..27638
DNA (804bp) protein (268aa)
Putative uncharacterized protein n=1 Tax=Synergistes sp. 3_1_syn1 RepID=G9PSL9_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EXG78225.1}; TaxID=866499 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Cloacibacillus.;" source="Cloacibacillus evryensis DSM 19522.;"
hypothetical protein
L3_106_000M1_scaffold_397_27
Cloacibacillus evryensis, Cloacibacillus, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

27686..28933
DNA (1248bp) protein (416aa)
Metal ion (Mn2+/Fe2+) transporter (Nramp) family metal ion transporter n=1 Tax=Synergistes sp. 3_1_syn1 RepID=G9PSL8_9BACT
Mn2+/Fe2-transporter, NRAMP family {ECO:0000313|EMBL:EXG78224.1}; TaxID=866499 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Cloacibacillus.;" source="Cloacibacillus evryensis DSM 19522.;"
natural resistance-associated macrophage protein
L3_106_000M1_scaffold_397_28
Firmicutes bacterium ASF500, Firmicutes, Bacteria

Not on your lists

comp(29258..29932)
DNA (675bp) protein (225aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium ASF500 RepID=V2YG48_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ESL14171.1}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
L3_106_000M1_scaffold_397_29
Firmicutes bacterium ASF500, Firmicutes, Bacteria

Not on your lists

comp(29907..30422)
DNA (516bp) protein (172aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium ASF500 RepID=V2ZI73_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ESL14170.1}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
RNA polymerase sigma factor, sigma-70 family
L3_106_000M1_scaffold_397_30
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30569..30991)
DNA (423bp) protein (141aa)
CBS-domain-containing membrane protein n=2 Tax=Ruminococcus RepID=D4L4V8_9FIRM
CBS-domain-containing membrane protein
CBS-domain-containing membrane protein {ECO:0000313|EMBL:CBL14653.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
Displaying items 1-30 of 94 in total

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