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L3_106_000M1_scaffold_1597

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_106_000M1_scaffold_1597_1
unknown

Not on your lists

1..273
DNA (273bp) protein (91aa)

This feature has no annotations

L3_106_000M1_scaffold_1597_2
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

427..1116
DNA (690bp) protein (230aa)
Cell division ATP-binding protein FtsE n=1 Tax=Firmicutes bacterium ASF500 RepID=V2YDL8_9FIRM
Cell division ATP-binding protein FtsE {ECO:0000313|EMBL:EGJ47439.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
ftsE; cell division protein FtsE
L3_106_000M1_scaffold_1597_3
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1100..1990
DNA (891bp) protein (297aa)
Cell division protein FtsX n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XAR2_9FIRM
Cell division protein FtsX {ECO:0000256|PIRNR:PIRNR003097}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
ftsX; cell division protein FtsX
L3_106_000M1_scaffold_1597_4
unknown

Not on your lists

2007..2108
DNA (102bp) protein (34aa)

This feature has no annotations

L3_106_000M1_scaffold_1597_5
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2134..3366
DNA (1233bp) protein (411aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XAR3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ47441.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
putative metalloendopeptidase
L3_106_000M1_scaffold_1597_6
Firmicutes bacterium ASF500, Firmicutes, Bacteria

Not on your lists

3542..4330
DNA (789bp) protein (263aa)
Type III pantothenate kinase {ECO:0000256|HAMAP-Rule:MF_01274}; EC=2.7.1.33 {ECO:0000256|HAMAP-Rule:MF_01274};; PanK-III {ECO:0000256|HAMAP-Rule:MF_01274}; Pantothenic acid kinase {ECO:0000256|HAMAP-Rule:MF_01274}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
pantothenate kinase (EC:2.7.1.33)
Type III pantothenate kinase n=1 Tax=Firmicutes bacterium ASF500 RepID=V2YEV2_9FIRM
L3_106_000M1_scaffold_1597_7
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4527..4982)
DNA (456bp) protein (152aa)
Bacterial transcription activator, effector binding domain n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L9C3_9FIRM
Bacterial transcription activator, effector binding domain.
Bacterial transcription activator, effector binding domain {ECO:0000313|EMBL:CBL16218.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L3_106_000M1_scaffold_1597_8
unknown

Not on your lists

5607..6116
DNA (510bp) protein (170aa)

This feature has no annotations

L3_106_000M1_scaffold_1597_9
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


6140..8782
DNA (2643bp) protein (881aa)
Valine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00026840}; EC=6.1.1.9 {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00105779};; Valyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02004}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
valS; valyl-tRNA synthetase (EC:6.1.1.9)
Valine--tRNA ligase n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4X9I9_9FIRM
L3_106_000M1_scaffold_1597_10
Firmicutes bacterium ASF500, Firmicutes, Bacteria

Not on your lists

8966..9646
DNA (681bp) protein (227aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium ASF500 RepID=V2ZM01_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ESL15630.1}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
hypothetical protein
L3_106_000M1_scaffold_1597_11
Firmicutes bacterium ASF500, Firmicutes, Bacteria

Not on your lists

9765..10238
DNA (474bp) protein (158aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium ASF500 RepID=V2Y0W9_9FIRM
Transcription elongation factor GreA {ECO:0000256|HAMAP-Rule:MF_00105, ECO:0000256|SAAS:SAAS00018706}; Transcript cleavage factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
greA; transcription elongation factor GreA
L3_106_000M1_scaffold_1597_12
Firmicutes bacterium ASF500, Firmicutes, Bacteria

Not on your lists

10272..11783
DNA (1512bp) protein (504aa)
Lysine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336}; EC=6.1.1.6 {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336};; Lysyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00252}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
lysS; lysyl-tRNA synthetase (EC:6.1.1.6)
Lysine--tRNA ligase n=1 Tax=Firmicutes bacterium ASF500 RepID=V2YH50_9FIRM
L3_106_000M1_scaffold_1597_13
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11898..13250
DNA (1353bp) protein (451aa)
TrkH family potassium uptake protein (EC:3.6.3.14)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XCG8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ48279.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
L3_106_000M1_scaffold_1597_14
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13268..13918
DNA (651bp) protein (217aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XCG7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ48278.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
potassium transporter Trk
L3_106_000M1_scaffold_1597_15
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13915..14676
DNA (762bp) protein (254aa)
RNA methyltransferase (EC:2.1.1.-)
TrmH family RNA methyltransferase n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XCG6_9FIRM
TrmH family RNA methyltransferase {ECO:0000313|EMBL:EGJ48277.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
L3_106_000M1_scaffold_1597_16
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14682..15908)
DNA (1227bp) protein (409aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=T5RYZ7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EQN60564.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
sugar phosphate permease
L3_106_000M1_scaffold_1597_17
Firmicutes bacterium ASF500, Firmicutes, Bacteria

Not on your lists

15993..17210
DNA (1218bp) protein (406aa)
DNA protecting protein DprA n=1 Tax=Firmicutes bacterium ASF500 RepID=V2YIP7_9FIRM
DNA protecting protein DprA {ECO:0000313|EMBL:ESL15477.1}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
putative smf protein
L3_106_000M1_scaffold_1597_18
Firmicutes bacterium ASF500, Firmicutes, Bacteria

Not on your lists

17293..19623
DNA (2331bp) protein (777aa)
DNA topoisomerase 1 {ECO:0000256|HAMAP-Rule:MF_00952}; EC=5.99.1.2 {ECO:0000256|HAMAP-Rule:MF_00952};; DNA topoisomerase I {ECO:0000256|HAMAP-Rule:MF_00952}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
topA; DNA topoisomerase I (EC:5.99.1.2)
DNA topoisomerase 1 n=1 Tax=Firmicutes bacterium ASF500 RepID=V2YJT0_9FIRM
L3_106_000M1_scaffold_1597_19
Firmicutes bacterium ASF500, Firmicutes, Bacteria

Not on your lists

19716..21023
DNA (1308bp) protein (436aa)
Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO {ECO:0000256|HAMAP-Rule:MF_01037}; EC=2.1.1.74 {ECO:0000256|HAMAP-Rule:MF_01037};; Folate-dependent tRNA (uracil-5-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01037}; Folate-dependent tRNA(M-5-U54)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01037}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
trmFO; tRNA methyltransferase (EC:2.1.1.74)
Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO n=1 Tax=Firmicutes bacterium ASF500 RepID=V2Y0F6_9FIRM
L3_106_000M1_scaffold_1597_20
Firmicutes bacterium ASF500, Firmicutes, Bacteria

Not on your lists

21289..21543
DNA (255bp) protein (85aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium ASF500 RepID=V2YIP1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ESL15472.1}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
XRE family transcriptional regulator
L3_106_000M1_scaffold_1597_21
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21540..22580
DNA (1041bp) protein (347aa)
Phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_00019, ECO:0000256|SAAS:SAAS00054336}; EC=2.3.1.n2 {ECO:0000256|HAMAP-Rule:MF_00019, ECO:0000256|SAAS:SAAS00054327};; Acyl-ACP phosphotransacylase {ECO:0000256|HAMAP-Rule:MF_00019}; Acyl-[acyl-carrier-protein]--phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_00019}; Phosphate-acyl-ACP acyltransferase {ECO:0000256|HAMAP-Rule:MF_00019}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
plsX; acyl-ACP--phosphate acyltransferase (EC:2.3.1.-)
Phosphate acyltransferase n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XCG0_9FIRM
L3_106_000M1_scaffold_1597_22
Firmicutes bacterium ASF500, Firmicutes, Bacteria

Not on your lists

22692..22925
DNA (234bp) protein (78aa)
Acyl carrier protein n=1 Tax=Firmicutes bacterium ASF500 RepID=V2YCF4_9FIRM
Acyl carrier protein {ECO:0000256|HAMAP-Rule:MF_01217, ECO:0000256|RuleBase:RU003545}; Short=ACP {ECO:0000256|HAMAP-Rule:MF_01217};; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
acyl carrier protein
L3_106_000M1_scaffold_1597_23
Firmicutes bacterium ASF500, Firmicutes, Bacteria

Not on your lists

23008..23682
DNA (675bp) protein (225aa)
Ribonuclease 3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231299}; EC=3.1.26.3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231445};; Ribonuclease III {ECO:0000256|HAMAP-Rule:MF_00104}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
rnc; ribonuclease III (EC:3.1.26.3)
Ribonuclease 3 n=1 Tax=Firmicutes bacterium ASF500 RepID=V2ZEL8_9FIRM
L3_106_000M1_scaffold_1597_24
Firmicutes bacterium ASF500, Firmicutes, Bacteria

Not on your lists

comp(23748..26825)
DNA (3078bp) protein (1026aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium ASF500 RepID=V2XT60_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ESL12864.1}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
hypothetical protein
L3_106_000M1_scaffold_1597_25
Lachnospiraceae bacterium COE1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27166..27453)
DNA (288bp) protein (96aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium COE1 RepID=R9L3R6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS53056.1}; TaxID=1235793 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium COE1.;"
hypothetical protein predicted by Glimmer/Critica
L3_106_000M1_scaffold_1597_26
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27636..28961)
DNA (1326bp) protein (442aa)
RNA polymerase sigma factor SigA n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4X9B0_9FIRM
RNA polymerase sigma factor SigA {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
sigA; RNA polymerase sigma factor SigA
L3_106_000M1_scaffold_1597_27
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28958..30718)
DNA (1761bp) protein (587aa)
DNA primase {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811}; EC=2.7.7.- {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811};; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
dnaG; DNA primase (EC:2.7.7.-)
DNA primase n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XCC2_9FIRM
L3_106_000M1_scaffold_1597_28
Firmicutes bacterium ASF500, Firmicutes, Bacteria

Not on your lists

comp(30815..31819)
DNA (1005bp) protein (335aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium ASF500 RepID=V2YCF0_9FIRM
Deoxyguanosinetriphosphate triphosphohydrolase-like protein {ECO:0000256|HAMAP-Rule:MF_01212}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
deoxyguanosinetriphosphate triphosphohydrolase
L3_106_000M1_scaffold_1597_29
Firmicutes bacterium ASF500, Firmicutes, Bacteria

Not on your lists

comp(32029..33372)
DNA (1344bp) protein (448aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium ASF500 RepID=V2YE68_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ESL13892.1}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
Na+/H+ antiporter NhaC
L3_106_000M1_scaffold_1597_30
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33519..34352
DNA (834bp) protein (278aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XCB8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ48152.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
N-acetylmuramoyl-L-alanine amidase family 2
Displaying items 1-30 of 31 in total

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