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L3_106_000M1_scaffold_4518

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_106_000M1_scaffold_4518_1
unknown

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1..3249
DNA (3249bp) protein (1083aa)

This feature has no annotations

L3_106_000M1_scaffold_4518_2
unknown

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comp(3333..3752)
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XF15_9FIRM
L3_106_000M1_scaffold_4518_3
unknown

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4129..4494
DNA (366bp) protein (122aa)
hypothetical protein n=1 Tax=Geobacillus caldoxylosilyticus RepID=UPI0002D5B720
L3_106_000M1_scaffold_4518_4
Lachnospiraceae bacterium M18-1, Clostridiales, Clostridia, Firmicutes, Bacteria

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4525..5013
DNA (489bp) protein (163aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium M18-1 RepID=R9JJV4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS34490.1}; TaxID=1235792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium M18-1.;"
TRAP-type C4-dicarboxylate transport system, small permease component
L3_106_000M1_scaffold_4518_5
unknown

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5016..6308
DNA (1293bp) protein (431aa)
TRAP transporter, DctM subunit n=2 Tax=Clostridiales RepID=D4MZX2_9FIRM
TRAP transporter, DctM subunit
TRAP transporter, DctM subunit {ECO:0000313|EMBL:CBL38167.1}; TaxID=245018 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SSC/2.;"
L3_106_000M1_scaffold_4518_6
Turicibacter sanguinis, Turicibacter, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(6418..7308)
DNA (891bp) protein (297aa)
hypothetical protein n=1 Tax=Bacillus sp. AP8 RepID=UPI0002FD8D2F
LysR substrate binding domain family protein {ECO:0000313|EMBL:EFF64324.1}; TaxID=702450 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Turicibacter.;" source="Turicibacter sanguinis PC909.;"
yybE2; HTH-type transcriptional regulator YybE
L3_106_000M1_scaffold_4518_7
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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7550..8677
DNA (1128bp) protein (376aa)
TRAP transporter solute receptor, DctP family n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C8H6_9FIRM
TRAP transporter solute receptor, DctP family {ECO:0000313|EMBL:EEC90932.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
tripartite ATP-independent periplasmic transporter solute receptor, DctP family
L3_106_000M1_scaffold_4518_8
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8769..9581
DNA (813bp) protein (271aa)
AP endonuclease, family 2 n=3 Tax=Clostridium RepID=E9SP08_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA93044.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
IolE; sugar phosphate isomerase
L3_106_000M1_scaffold_4518_9
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9599..10351
DNA (753bp) protein (251aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. 7_3_54FAA RepID=G5F6I0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHF07977.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
bacC; bacilysin biosynthesis oxidoreductase bacC
L3_106_000M1_scaffold_4518_10
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10473..11132)
DNA (660bp) protein (220aa)
Deoxyribose-phosphate aldolase {ECO:0000256|HAMAP-Rule:MF_00114, ECO:0000256|SAAS:SAAS00058202}; Short=DERA {ECO:0000256|HAMAP-Rule:MF_00114};; EC=4.1.2.4 {ECO:0000256|HAMAP-Rule:MF_00114, ECO:0000256|SAAS:SAAS00058202};; 2-deoxy-D-ribose 5-phosphate aldolase {ECO:0000256|HAMAP-Rule:MF_00114}; Phosphodeoxyriboaldolase {ECO:0000256|HAMAP-Rule:MF_00114}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
deoxyribose-phosphate aldolase (EC:4.1.2.4)
Deoxyribose-phosphate aldolase n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XDT4_9FIRM
L3_106_000M1_scaffold_4518_11
Firmicutes bacterium ASF500, Firmicutes, Bacteria

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comp(11336..12517)
DNA (1182bp) protein (394aa)
S-adenosylmethionine synthase {ECO:0000256|HAMAP-Rule:MF_00086, ECO:0000256|RuleBase:RU000541}; Short=AdoMet synthase {ECO:0000256|HAMAP-Rule:MF_00086};; EC=2.5.1.6 {ECO:0000256|HAMAP-Rule:MF_00086, ECO:0000256|RuleBase:RU000541};; MAT {ECO:0000256|HAMAP-Rule:MF_00086}; Methionine adenosyltransferase {ECO:0000256|HAMAP-Rule:MF_00086}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
metK; S-adenosylmethionine synthetase (EC:2.5.1.6)
S-adenosylmethionine synthase n=1 Tax=Firmicutes bacterium ASF500 RepID=V2YIC3_9FIRM
L3_106_000M1_scaffold_4518_12
Clostridium sp. ATCC 29733, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(12762..13367)
DNA (606bp) protein (202aa)
Uncharacterized protein n=1 Tax=Clostridium sp. (strain ATCC 29733 / VPI C48-50) RepID=U2EXS5_CLOS4
Uncharacterized protein {ECO:0000313|EMBL:ERI97861.1}; TaxID=1507 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. (strain ATCC 29733 / VPI C48-50).;"
hypothetical protein
Displaying 12 items

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