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L3_106_000M1_scaffold_2459

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_106_000M1_scaffold_2459_1
Firmicutes bacterium ASF500, Firmicutes, Bacteria

Not on your lists

comp(174..983)
DNA (810bp) protein (270aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium ASF500 RepID=V2YH05_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ESL14887.1}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
ATPases involved in chromosome partitioning
L3_106_000M1_scaffold_2459_2
Firmicutes bacterium ASF500, Firmicutes, Bacteria

Not on your lists

comp(1094..3394)
DNA (2301bp) protein (767aa)
Penicillin-binding protein 2 n=1 Tax=Firmicutes bacterium ASF500 RepID=V2YI54_9FIRM
Penicillin-binding protein 2 {ECO:0000313|EMBL:ESL14886.1}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
pbpA; penicillin-binding protein A
L3_106_000M1_scaffold_2459_3
Firmicutes bacterium ASF500, Firmicutes, Bacteria

Not on your lists

comp(3429..3941)
DNA (513bp) protein (171aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium ASF500 RepID=V2ZJR6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ESL14885.1}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
L3_106_000M1_scaffold_2459_4
Firmicutes bacterium ASF500, Firmicutes, Bacteria

Not on your lists

comp(3983..4825)
DNA (843bp) protein (281aa)
Rod shape-determining protein MreC n=1 Tax=Firmicutes bacterium ASF500 RepID=V2XYV5_9FIRM
Cell shape-determining protein MreC {ECO:0000256|PIRNR:PIRNR038471}; Cell shape protein MreC {ECO:0000256|PIRNR:PIRNR038471}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
mreC; putative rod shape-determining protein MreC
L3_106_000M1_scaffold_2459_5
Firmicutes bacterium ASF500, Firmicutes, Bacteria

Not on your lists

comp(4822..5421)
DNA (600bp) protein (200aa)
Maf-like protein N510_00917 n=1 Tax=Firmicutes bacterium ASF500 RepID=V2YEU0_9FIRM
Maf-like protein N510_00917 {ECO:0000256|HAMAP-Rule:MF_00528}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
Maf-like protein
L3_106_000M1_scaffold_2459_6
Firmicutes bacterium ASF500, Firmicutes, Bacteria

Not on your lists

comp(5458..6309)
DNA (852bp) protein (284aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium ASF500 RepID=V2XYV0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ESL14879.1}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
hypothetical protein
L3_106_000M1_scaffold_2459_7
Firmicutes bacterium ASF500, Firmicutes, Bacteria

Not on your lists

comp(6367..6816)
DNA (450bp) protein (150aa)
Deoxyuridine 5'-triphosphate nucleotidohydrolase {ECO:0000256|HAMAP-Rule:MF_00116, ECO:0000256|SAAS:SAAS00071038}; Short=dUTPase {ECO:0000256|HAMAP-Rule:MF_00116};; EC=3.6.1.23 {ECO:0000256|HAMAP-Rule:MF_00116, ECO:0000256|SAAS:SAAS00071036};; dUTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_00116}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
Deoxyuridine 5'-triphosphate nucleotidohydrolase n=1 Tax=Firmicutes bacterium ASF500 RepID=V2YET4_9FIRM
dut; deoxyuridine 5'-triphosphate nucleotidohydrolase
L3_106_000M1_scaffold_2459_8
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6841..8100)
DNA (1260bp) protein (420aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KBJ3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN40059.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
Acyl-CoA reductase (LuxC).
L3_106_000M1_scaffold_2459_9
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8097..9221)
DNA (1125bp) protein (375aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RYY5_9FIRM
Acyl-protein synthetase {ECO:0000313|EMBL:KJF41042.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
acyl-protein synthetase LuxE
L3_106_000M1_scaffold_2459_10
Firmicutes bacterium ASF500, Firmicutes, Bacteria

Not on your lists

comp(9243..11327)
DNA (2085bp) protein (695aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium ASF500 RepID=V2YI44_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ESL14876.1}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
peptidase U32 family protein
L3_106_000M1_scaffold_2459_11
Firmicutes bacterium ASF500, Firmicutes, Bacteria

Not on your lists

comp(11396..11707)
DNA (312bp) protein (104aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium ASF500 RepID=V2ZJQ8_9FIRM
Cell division protein ZapA {ECO:0000256|SAAS:SAAS00072473}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
hypothetical protein
L3_106_000M1_scaffold_2459_12
unknown

Not on your lists

comp(11764..12060)
DNA (297bp) protein (99aa)

This feature has no annotations

L3_106_000M1_scaffold_2459_13
Firmicutes bacterium ASF500, Firmicutes, Bacteria

Not on your lists

12121..13059
DNA (939bp) protein (313aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium ASF500 RepID=V2YIH1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ESL15006.1}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
hypothetical protein
L3_106_000M1_scaffold_2459_14
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13064..14068
DNA (1005bp) protein (335aa)
DNA replication protein DnaC n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XEB9_9FIRM
DNA replication protein DnaC {ECO:0000313|EMBL:EGJ46419.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
hypothetical protein
L3_106_000M1_scaffold_2459_15
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14128..14298
DNA (171bp) protein (57aa)
Putative uncharacterized protein n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5IHB0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHI59181.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
L3_106_000M1_scaffold_2459_16
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14431..14859
DNA (429bp) protein (143aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XFV8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ45819.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
signal-transduction protein
L3_106_000M1_scaffold_2459_17
BJP_08E140C01_Spirochaeta_53_29, Spirochaeta, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

comp(14990..15982)
DNA (993bp) protein (331aa)
Isopropylmalate/homocitrate/citramalate synthases (EC:4.1.3.39)
Putative uncharacterized protein id=4341129 bin=GWC2_Spirochaete_52_13 species=Bilophila sp. 4_1_30 genus=Bilophila taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes
Tax=BJP_08E140C01_Spirochaeta_53_29
L3_106_000M1_scaffold_2459_18
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16240..16917)
DNA (678bp) protein (226aa)
TIGR00266 family protein n=2 Tax=Clostridiales RepID=U2DBK7_9CLOT
TIGR00266 family protein {ECO:0000313|EMBL:ERI78847.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
conserved hypothetical protein TIGR00266
L3_106_000M1_scaffold_2459_19
Firmicutes bacterium ASF500, Firmicutes, Bacteria

Not on your lists

comp(17030..18151)
DNA (1122bp) protein (374aa)
Peptide chain release factor 2 n=1 Tax=Firmicutes bacterium ASF500 RepID=V2YGR8_9FIRM
Peptide chain release factor 2 {ECO:0000256|HAMAP-Rule:MF_00094, ECO:0000256|SAAS:SAAS00020438}; Short=RF-2 {ECO:0000256|HAMAP-Rule:MF_00094};; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
prfB; peptide chain release factor 2
L3_106_000M1_scaffold_2459_20
unknown

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comp(18308..18418)
DNA (111bp) protein (37aa)

This feature has no annotations

L3_106_000M1_scaffold_2459_21
Anaerotruncus sp. G3(2012), Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19818..21335)
DNA (1518bp) protein (506aa)
Uncharacterized protein n=1 Tax=Anaerotruncus sp. G3(2012) RepID=R9M0L7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS64358.1}; TaxID=1235835 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus sp. G3(2012).;"
hypothetical protein
L3_106_000M1_scaffold_2459_22
Anaerotruncus sp. G3(2012), Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21353..21808)
DNA (456bp) protein (152aa)
Uncharacterized protein n=1 Tax=Anaerotruncus sp. G3(2012) RepID=R9M931_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS64357.1}; TaxID=1235835 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus sp. G3(2012).;"
L3_106_000M1_scaffold_2459_23
Anaerotruncus sp. G3(2012), Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21889..22902)
DNA (1014bp) protein (338aa)
Uncharacterized protein n=1 Tax=Anaerotruncus sp. G3(2012) RepID=R9M122_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS64356.1}; TaxID=1235835 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus sp. G3(2012).;"
hypothetical protein
L3_106_000M1_scaffold_2459_24
Anaerotruncus sp. G3(2012), Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23071..23901)
DNA (831bp) protein (277aa)
Uncharacterized protein n=1 Tax=Anaerotruncus sp. G3(2012) RepID=R9M041_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS64355.1}; TaxID=1235835 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus sp. G3(2012).;"
aldolase
L3_106_000M1_scaffold_2459_25
Anaerotruncus sp. G3(2012), Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24107..24868)
DNA (762bp) protein (254aa)
Uncharacterized protein n=1 Tax=Anaerotruncus sp. G3(2012) RepID=R9LZZ5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS64354.1}; TaxID=1235835 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus sp. G3(2012).;"
regulatory protein IclR
L3_106_000M1_scaffold_2459_26
unknown

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25214..25399
DNA (186bp) protein (62aa)

This feature has no annotations

Displaying 26 items

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