ggKbase home page

L3_106_000M1_scaffold_3317

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_106_000M1_scaffold_3317_1
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

703..2331
DNA (1629bp) protein (543aa)
Acetolactate synthase {ECO:0000256|RuleBase:RU003591}; EC=2.2.1.6 {ECO:0000256|RuleBase:RU003591};; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
Acetolactate synthase n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XEX0_9FIRM
acetolactate synthase large subunit
L3_106_000M1_scaffold_3317_2
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2346..2831
DNA (486bp) protein (162aa)
Acetolactate synthase, small subunit n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XEW9_9FIRM
Acetolactate synthase, small subunit {ECO:0000313|EMBL:EGJ45989.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
acetolactate synthase small subunit
L3_106_000M1_scaffold_3317_3
Firmicutes bacterium ASF500, Firmicutes, Bacteria

Not on your lists

2983..4686
DNA (1704bp) protein (568aa)
acetolactate synthase large subunit, biosynthetic type (EC:2.2.1.6)
Acetolactate synthase, large subunit, biosynthetic type n=1 Tax=Firmicutes bacterium ASF500 RepID=V2YHU8_9FIRM
Acetolactate synthase, large subunit, biosynthetic type {ECO:0000313|EMBL:ESL14786.1}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
L3_106_000M1_scaffold_3317_4
Firmicutes bacterium ASF500, Firmicutes, Bacteria

Not on your lists

4702..5268
DNA (567bp) protein (189aa)
acetolactate synthase small subunit (EC:2.2.1.6)
Acetolactate synthase, small subunit n=1 Tax=Firmicutes bacterium ASF500 RepID=V2YGR7_9FIRM
Acetolactate synthase, small subunit {ECO:0000313|EMBL:ESL14787.1}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
L3_106_000M1_scaffold_3317_5
Firmicutes bacterium ASF500, Firmicutes, Bacteria

Not on your lists

5249..6268
DNA (1020bp) protein (340aa)
Ketol-acid reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00435, ECO:0000256|SAAS:SAAS00051427}; EC=1.1.1.86 {ECO:0000256|HAMAP-Rule:MF_00435, ECO:0000256|SAAS:SAAS00051427};; Acetohydroxy-acid isomeroreductase {ECO:0000256|HAMAP-Rule:MF_00435}; Alpha-keto-beta-hydroxylacyl reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00435}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
ilvC; Ketol-acid reductoisomerase (EC:1.1.1.86)
Ketol-acid reductoisomerase n=1 Tax=Firmicutes bacterium ASF500 RepID=V2YEK3_9FIRM
L3_106_000M1_scaffold_3317_6
unknown

Not on your lists

comp(6325..6564)
DNA (240bp) protein (80aa)

This feature has no annotations

L3_106_000M1_scaffold_3317_7
unknown

Not on your lists

comp(6637..6888)
DNA (252bp) protein (84aa)

This feature has no annotations

L3_106_000M1_scaffold_3317_8
unknown

Not on your lists

comp(7014..7244)
DNA (231bp) protein (77aa)

This feature has no annotations

L3_106_000M1_scaffold_3317_9
Firmicutes bacterium ASF500, Firmicutes, Bacteria

Not on your lists

comp(7562..8614)
DNA (1053bp) protein (351aa)
Stage II sporulation protein D n=1 Tax=Firmicutes bacterium ASF500 RepID=V2YDN1_9FIRM
Stage II sporulation protein D {ECO:0000313|EMBL:ESL14473.1}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
spoIID; stage II sporulation protein D
L3_106_000M1_scaffold_3317_10
Firmicutes bacterium ASF500, Firmicutes, Bacteria

Not on your lists

comp(8680..9624)
DNA (945bp) protein (315aa)
L-lactate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00488}; Short=L-LDH {ECO:0000256|HAMAP-Rule:MF_00488};; EC=1.1.1.27 {ECO:0000256|HAMAP-Rule:MF_00488};; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
L-lactate dehydrogenase n=1 Tax=Firmicutes bacterium ASF500 RepID=V2ZHL6_9FIRM
L-lactate dehydrogenase
L3_106_000M1_scaffold_3317_11
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9834..10472
DNA (639bp) protein (213aa)
Putative DNA-invertase n=3 Tax=Clostridiales RepID=G9YLZ0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO34628.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
Site-specific recombinases, DNA invertase Pin homologs
L3_106_000M1_scaffold_3317_12
Firmicutes bacterium ASF500, Firmicutes, Bacteria

Not on your lists

comp(10680..12488)
DNA (1809bp) protein (603aa)
Elongation factor 4 {ECO:0000256|HAMAP-Rule:MF_00071}; Short=EF-4 {ECO:0000256|HAMAP-Rule:MF_00071};; EC=3.6.5.n1 {ECO:0000256|HAMAP-Rule:MF_00071};; Ribosomal back-translocase LepA {ECO:0000256|HAMAP-Rule:MF_00071}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
Elongation factor 4 n=1 Tax=Firmicutes bacterium ASF500 RepID=V2YEH2_9FIRM
lepA; GTP-binding protein LepA
L3_106_000M1_scaffold_3317_13
Firmicutes bacterium ASF500, Firmicutes, Bacteria

Not on your lists

comp(12673..13551)
DNA (879bp) protein (293aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium ASF500 RepID=V2YHR6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ESL14746.1}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
putative Xre family DNA-binding protein
L3_106_000M1_scaffold_3317_14
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13608..14582
DNA (975bp) protein (325aa)
Phosphate acetyltransferase n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XFE3_9FIRM
Phosphate acetyltransferase {ECO:0000313|EMBL:EGJ46163.2}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
phosphate acetyltransferase
L3_106_000M1_scaffold_3317_15
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14821..15285)
DNA (465bp) protein (155aa)
DNA-binding helix-turn-helix protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YQX1_9FIRM
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EHM50685.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
XRE family transcriptional regulator
L3_106_000M1_scaffold_3317_16
Firmicutes bacterium ASF500, Firmicutes, Bacteria

Not on your lists

comp(15470..16378)
DNA (909bp) protein (303aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
pseudouridine synthase (EC:5.4.99.-)
Uncharacterized protein n=1 Tax=Firmicutes bacterium ASF500 RepID=V2YF72_9FIRM
L3_106_000M1_scaffold_3317_17
Firmicutes bacterium ASF500, Firmicutes, Bacteria

Not on your lists

comp(16365..16850)
DNA (486bp) protein (162aa)
Lipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|RuleBase:RU000594}; EC=3.4.23.36 {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|RuleBase:RU000594};; Prolipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161}; Signal peptidase II {ECO:0000256|HAMAP-Rule:MF_00161}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
lspA; lipoprotein signal peptidase (EC:3.4.23.36)
Lipoprotein signal peptidase n=1 Tax=Firmicutes bacterium ASF500 RepID=V2XZ59_9FIRM
L3_106_000M1_scaffold_3317_18
Firmicutes bacterium ASF500, Firmicutes, Bacteria

Not on your lists

comp(16940..18190)
DNA (1251bp) protein (417aa)
processing peptidase (EC:3.4.24.64)
Uncharacterized protein n=1 Tax=Firmicutes bacterium ASF500 RepID=V2YGW2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ESL14446.1}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
L3_106_000M1_scaffold_3317_19
Firmicutes bacterium ASF500, Firmicutes, Bacteria

Not on your lists

18338..19093
DNA (756bp) protein (252aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium ASF500 RepID=V2YHS8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ESL14761.1}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
putative metalloendopeptidase
L3_106_000M1_scaffold_3317_20
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19149..19298)
DNA (150bp) protein (50aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XEU7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ45967.2}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
Displaying 20 items

View Taxonomy