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L3_106_000M1_scaffold_156

Search features with annotation key words

Displaying items 1-30 of 136 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_106_000M1_scaffold_156_1
Oscillibacter sp. CAG:155, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2..85)
DNA (84bp) protein (28aa)
serC; phosphoserine aminotransferase (EC:2.6.1.52)
Phosphoserine aminotransferase {ECO:0000256|HAMAP-Rule:MF_00160}; EC=2.6.1.52 {ECO:0000256|HAMAP-Rule:MF_00160};; Phosphohydroxythreonine aminotransferase {ECO:0000256|HAMAP-Rule:MF_00160}; TaxID=1262910 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:155.;"
Phosphoserine aminotransferase n=2 Tax=Oscillibacter RepID=U2R106_9FIRM
L3_106_000M1_scaffold_156_2
Oscillibacter sp. 1-3, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

527..1363
DNA (837bp) protein (279aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. 1-3 RepID=R9M2C7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS64993.1}; TaxID=1235797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. 1-3.;"
hypothetical protein
L3_106_000M1_scaffold_156_3
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1363..2652
DNA (1290bp) protein (430aa)
Chloride transporter, ClC family n=2 Tax=Oscillibacter RepID=U2R102_9FIRM
Chloride transporter, ClC family {ECO:0000313|EMBL:ERK64007.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
putative voltage-gated chloride channel
L3_106_000M1_scaffold_156_4
Oscillibacter sp. 1-3, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2848..3555
DNA (708bp) protein (236aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. 1-3 RepID=R9M701_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS66799.1}; TaxID=1235797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. 1-3.;"
hypothetical protein
L3_106_000M1_scaffold_156_5
Oscillibacter sp. 1-3, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3595..3765
DNA (171bp) protein (57aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. 1-3 RepID=R9M7K9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS66798.1}; TaxID=1235797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. 1-3.;"
hypothetical protein
L3_106_000M1_scaffold_156_6
unknown

Not on your lists

comp(3762..3977)
DNA (216bp) protein (72aa)

This feature has no annotations

L3_106_000M1_scaffold_156_7
Clostridium phage phiCD211, Caudovirales, Viruses

Not on your lists

comp(4093..4272)
DNA (180bp) protein (60aa)
hypothetical protein n=1 Tax=Paenibacillus fonticola RepID=UPI00037FC0C0
Uncharacterized protein {ECO:0000313|EMBL:CEK40402.1}; TaxID=1582152 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Myoviridae.;" source="Clostridium phage phiCD211.;"
hypothetical protein
L3_106_000M1_scaffold_156_8
Oscillibacter sp. CAG:155, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4391..6610)
DNA (2220bp) protein (740aa)
Putative polysaccharide pyruvyl transferase n=1 Tax=Oscillibacter sp. CAG:155 RepID=R6TKJ2_9FIRM
Putative polysaccharide pyruvyl transferase {ECO:0000313|EMBL:CDC70229.1}; TaxID=1262910 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:155.;"
putative polysaccharide pyruvyl transferase
L3_106_000M1_scaffold_156_9
Oscillibacter sp. 1-3, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6778..7266
DNA (489bp) protein (163aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. 1-3 RepID=R9M8M5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS67046.1}; TaxID=1235797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. 1-3.;"
hypothetical protein
L3_106_000M1_scaffold_156_10
Oscillibacter sp. CAG:155, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7300..8106)
DNA (807bp) protein (269aa)
Pyrroline-5-carboxylate reductase {ECO:0000256|HAMAP-Rule:MF_01925}; Short=P5C reductase {ECO:0000256|HAMAP-Rule:MF_01925};; Short=P5CR {ECO:0000256|HAMAP-Rule:MF_01925};; EC=1.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01925};; PCA reductase {ECO:0000256|HAMAP-Rule:MF_01925}; TaxID=1262910 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:155.;"
proC; pyrroline-5-carboxylate reductase (EC:1.5.1.2)
Pyrroline-5-carboxylate reductase n=1 Tax=Oscillibacter sp. CAG:155 RepID=R6UCB3_9FIRM
L3_106_000M1_scaffold_156_11
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8120..9367)
DNA (1248bp) protein (416aa)
Gamma-glutamyl phosphate reductase {ECO:0000256|HAMAP-Rule:MF_00412, ECO:0000256|SAAS:SAAS00054156}; Short=GPR {ECO:0000256|HAMAP-Rule:MF_00412};; EC=1.2.1.41 {ECO:0000256|HAMAP-Rule:MF_00412, ECO:0000256|SAAS:SAAS00186003};; Glutamate-5-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00412}; Glutamyl-gamma-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00412}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
proA; gamma-glutamyl phosphate reductase (EC:1.2.1.41)
Gamma-glutamyl phosphate reductase n=2 Tax=Oscillibacter RepID=U2RY54_9FIRM
L3_106_000M1_scaffold_156_12
Oscillibacter sp. CAG:155, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9409..10206)
DNA (798bp) protein (266aa)
Glutamate 5-kinase {ECO:0000256|HAMAP-Rule:MF_00456, ECO:0000256|SAAS:SAAS00186442}; EC=2.7.2.11 {ECO:0000256|HAMAP-Rule:MF_00456, ECO:0000256|SAAS:SAAS00186442};; Gamma-glutamyl kinase {ECO:0000256|HAMAP-Rule:MF_00456}; TaxID=1262910 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:155.;"
proB; glutamate 5-kinase (EC:2.7.2.11)
Glutamate 5-kinase n=1 Tax=Oscillibacter sp. CAG:155 RepID=R6T859_9FIRM
L3_106_000M1_scaffold_156_13
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10333..11055
DNA (723bp) protein (241aa)
Endopeptidase Clp n=2 Tax=Oscillibacter RepID=U2QQJ6_9FIRM
Endopeptidase Clp {ECO:0000313|EMBL:ERK58459.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
S14 family peptidase
L3_106_000M1_scaffold_156_14
Oscillibacter sp. 1-3, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11306..14872
DNA (3567bp) protein (1189aa)
Chromosome partition protein Smc n=1 Tax=Oscillibacter sp. 1-3 RepID=R9MF59_9FIRM
Chromosome partition protein Smc {ECO:0000256|HAMAP-Rule:MF_01894}; TaxID=1235797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. 1-3.;"
smc; chromosome segregation protein SMC
L3_106_000M1_scaffold_156_15
unknown

Not on your lists

14885..15034
DNA (150bp) protein (50aa)

This feature has no annotations

L3_106_000M1_scaffold_156_16
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15117..15989
DNA (873bp) protein (291aa)
Signal recognition particle receptor FtsY n=2 Tax=Oscillibacter RepID=U2QJ17_9FIRM
Signal recognition particle receptor FtsY {ECO:0000256|HAMAP-Rule:MF_00920}; Short=SRP receptor {ECO:0000256|HAMAP-Rule:MF_00920};; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
ftsY; signal recognition particle receptor
L3_106_000M1_scaffold_156_17
unknown

Not on your lists

15986..16243
DNA (258bp) protein (86aa)

This feature has no annotations

L3_106_000M1_scaffold_156_18
Oscillibacter sp. CAG:155, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16311..17024
DNA (714bp) protein (238aa)
Ribonuclease PH {ECO:0000256|HAMAP-Rule:MF_00564, ECO:0000256|SAAS:SAAS00104182}; Short=RNase PH {ECO:0000256|HAMAP-Rule:MF_00564};; EC=2.7.7.56 {ECO:0000256|HAMAP-Rule:MF_00564, ECO:0000256|SAAS:SAAS00104188};; tRNA nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_00564}; TaxID=1262910 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:155.;"
rph; ribonuclease PH (EC:2.7.7.56)
Ribonuclease PH n=1 Tax=Oscillibacter sp. CAG:155 RepID=R6ULI8_9FIRM
L3_106_000M1_scaffold_156_19
Oscillibacter sp. CAG:155, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


17242..17832
DNA (591bp) protein (197aa)
Non-canonical purine NTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405, ECO:0000256|SAAS:SAAS00020486}; EC=3.6.1.19 {ECO:0000256|HAMAP-Rule:MF_01405, ECO:0000256|SAAS:SAAS00020468};; Non-standard purine NTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; Nucleoside-triphosphate diphosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; Nucleoside-triphosphate pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; TaxID=1262910 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:155.;"
rdgB; nucleoside-triphosphatase (EC:3.6.1.15)
Non-canonical purine NTP pyrophosphatase n=1 Tax=Oscillibacter sp. CAG:155 RepID=R6ULI3_9FIRM
L3_106_000M1_scaffold_156_20
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18072..18401
DNA (330bp) protein (110aa)
RNA-binding protein, YhbY family n=2 Tax=Oscillibacter RepID=U2Q145_9FIRM
RNA-binding protein, YhbY family {ECO:0000313|EMBL:ERK56445.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
hypothetical protein
L3_106_000M1_scaffold_156_21
unknown

Not on your lists

18425..18619
DNA (195bp) protein (65aa)

This feature has no annotations

L3_106_000M1_scaffold_156_22
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18636..19826
DNA (1191bp) protein (397aa)
Nicotinate-nucleotide adenylyltransferase {ECO:0000256|SAAS:SAAS00086517}; EC=2.7.7.18 {ECO:0000256|SAAS:SAAS00086517};; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
nadD; nicotinate-nucleotide adenylyltransferase (EC:2.7.7.18)
Nicotinate-nucleotide adenylyltransferase n=2 Tax=Oscillibacter RepID=U2QJX1_9FIRM
L3_106_000M1_scaffold_156_23
Oscillibacter valericigenes, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19834..21324
DNA (1491bp) protein (497aa)
Cell envelope-like function transcriptional attenuator common domain protein n=3 Tax=Oscillibacter RepID=U2QDW5_9FIRM
putative LytR family regulatory protein
Putative LytR family regulatory protein {ECO:0000313|EMBL:BAL00174.1}; TaxID=693746 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 /; Sjm18-20).;"
L3_106_000M1_scaffold_156_24
Oscillibacter sp. 1-3, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21341..21703
DNA (363bp) protein (121aa)
Ribosomal silencing factor RsfS n=1 Tax=Oscillibacter sp. 1-3 RepID=R9MGV8_9FIRM
Ribosomal silencing factor RsfS {ECO:0000256|HAMAP-Rule:MF_01477}; TaxID=1235797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. 1-3.;"
hypothetical protein
L3_106_000M1_scaffold_156_25
Eggerthella sp. CAG:1427, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

22528..22953
DNA (426bp) protein (142aa)
Uncharacterized protein n=1 Tax=Eggerthella sp. CAG:1427 RepID=R5FM66_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CCY06115.1}; TaxID=1262874 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella; environmental samples.;" source="Eggerthella sp. CAG:1427.;"
hypothetical protein
L3_106_000M1_scaffold_156_26
Firmicutes bacterium ASF500, Firmicutes, Bacteria

Not on your lists

comp(23054..23899)
DNA (846bp) protein (282aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium ASF500 RepID=V2ZLT6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ESL15555.1}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
EDD domain protein, DegV family
L3_106_000M1_scaffold_156_27
Atopobium vaginae, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(23905..24351)
DNA (447bp) protein (149aa)
Transcriptional regulator, MarR family n=2 Tax=Atopobium vaginae RepID=F1T6G7_9ACTN
Transcriptional regulator, MarR family {ECO:0000313|EMBL:EGF22861.1}; TaxID=525256 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium vaginae DSM 15829.;"
MarR family regulatory protein
L3_106_000M1_scaffold_156_28
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


24579..27224
DNA (2646bp) protein (882aa)
Leucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00049}; EC=6.1.1.4 {ECO:0000256|HAMAP-Rule:MF_00049};; Leucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00049}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
leuS; leucyl-tRNA synthetase (EC:6.1.1.4)
Leucine--tRNA ligase n=2 Tax=Oscillibacter RepID=U2PVZ1_9FIRM
L3_106_000M1_scaffold_156_29
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27370..27921
DNA (552bp) protein (184aa)
Uncharacterized protein n=2 Tax=Oscillibacter RepID=U2QER3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK56503.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
hypothetical protein
L3_106_000M1_scaffold_156_30
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28094..28276
DNA (183bp) protein (61aa)
30S ribosomal protein S21 n=2 Tax=Oscillibacter RepID=U2RM85_9FIRM
30S ribosomal protein S21 {ECO:0000256|HAMAP-Rule:MF_00358, ECO:0000256|RuleBase:RU000667}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
rpsU; 30S ribosomal protein S21
Displaying items 1-30 of 136 in total

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