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L3_106_000M1_scaffold_1065

Search features with annotation key words

Displaying items 1-30 of 54 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_106_000M1_scaffold_1065_1
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2..1273
DNA (1272bp) protein (424aa)
Xenobiotic-transporting ATPase (EC:3.6.3.44)
ABC transporter n=4 Tax=Clostridiales RepID=E5XFB5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ27237.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
L3_106_000M1_scaffold_1065_2
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2551..3087
DNA (537bp) protein (179aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CI81_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO29566.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
transcriptional regulator
L3_106_000M1_scaffold_1065_3
Lachnospiraceae bacterium M18-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3087..3500
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium M18-1 RepID=R9JVS6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS38071.1}; TaxID=1235792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium M18-1.;"
hypothetical protein
L3_106_000M1_scaffold_1065_4
unknown

Not on your lists

3454..4107
DNA (654bp) protein (218aa)

This feature has no annotations

L3_106_000M1_scaffold_1065_5
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

Not on your lists

4109..4531
DNA (423bp) protein (141aa)
DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6CXQ3_9FIRM
DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog {ECO:0000313|EMBL:CDA81318.1}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog
L3_106_000M1_scaffold_1065_6
Oscillibacter valericigenes, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4684..4914
DNA (231bp) protein (77aa)
Uncharacterized protein n=1 Tax=Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 / Sjm18-20) RepID=G4KTS7_OSCVS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL00332.1}; TaxID=693746 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 /; Sjm18-20).;"
L3_106_000M1_scaffold_1065_7
Firmicutes bacterium ASF500, Firmicutes, Bacteria

Not on your lists

4898..5323
DNA (426bp) protein (142aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium ASF500 RepID=V2Y9I1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ESL13043.1}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
putative site-specific recombinase
L3_106_000M1_scaffold_1065_8
Streptococcus gallolyticus, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(5552..5842)
DNA (291bp) protein (97aa)
nhaC; acetyltransferase (EC:2.3.1.-)
hypothetical protein n=1 Tax=Zymophilus raffinosivorans RepID=UPI000382798E
Acetyltransferase, GNAT family {ECO:0000313|EMBL:EFM29247.1}; TaxID=545774 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" source="Streptococcus gallolyticus subsp. gallolyticus TX20005.;"
L3_106_000M1_scaffold_1065_9
unknown

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comp(5790..5984)
DNA (195bp) protein (65aa)

This feature has no annotations

L3_106_000M1_scaffold_1065_10
Dialister succinatiphilus, Dialister, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(6637..7098)
DNA (462bp) protein (154aa)
Methylated-DNA--protein-cysteine methyltransferase {ECO:0000256|HAMAP-Rule:MF_00772}; EC=2.1.1.63 {ECO:0000256|HAMAP-Rule:MF_00772};; 6-O-methylguanine-DNA methyltransferase {ECO:0000256|HAMAP-Rule:MF_00772}; O-6-methylguanine-DNA-alkyltransferase {ECO:0000256|HAMAP-Rule:MF_00772}; TaxID=742743 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Dialister.;" source="Dialister succinatiphilus YIT 11850.;"
hypothetical protein n=1 Tax=Selenomonas bovis RepID=UPI00037158F5
cysteine methyltransferase
L3_106_000M1_scaffold_1065_11
Desulfosporosinus sp. I2, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7095..7622)
DNA (528bp) protein (176aa)
methylphosphotriester-DNA alkyltransferase (EC:2.1.1.-)
AraC family transcriptional regulator n=1 Tax=Zymophilus raffinosivorans RepID=UPI00037D5D3E
ADA regulatory protein {ECO:0000313|EMBL:KJR45100.1}; TaxID=1617025 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus sp. I2.;"
L3_106_000M1_scaffold_1065_12
Roseburia sp. CAG:471, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7636..8352)
DNA (717bp) protein (239aa)
Uncharacterized protein n=1 Tax=Blautia sp. CAG:52 RepID=R6GIL4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD98400.1}; TaxID=1262948 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:471.;"
hypothetical protein
L3_106_000M1_scaffold_1065_13
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

Not on your lists

comp(8366..9001)
DNA (636bp) protein (212aa)
DNA-3-methyladenine glycosylase II (EC:3.2.2.21)
DNA-3-methyladenine glycosylase II n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6DDH7_9FIRM
DNA-3-methyladenine glycosylase II {ECO:0000313|EMBL:CDA82276.1}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
L3_106_000M1_scaffold_1065_14
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9496..9684
DNA (189bp) protein (63aa)
Uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PBU0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS11065.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
L3_106_000M1_scaffold_1065_15
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9788..11374
DNA (1587bp) protein (529aa)
TnpX site-specific recombinase n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PBT9_9FIRM
TnpX site-specific recombinase {ECO:0000313|EMBL:EDS11064.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
putative site-specific recombinase
L3_106_000M1_scaffold_1065_16
Oscillibacter valericigenes, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11454..12701
DNA (1248bp) protein (416aa)
Putative site-specific recombinase n=1 Tax=Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 / Sjm18-20) RepID=G4KUG6_OSCVS
putative site-specific recombinase
Putative site-specific recombinase {ECO:0000313|EMBL:BAL00409.1}; TaxID=693746 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 /; Sjm18-20).;"
L3_106_000M1_scaffold_1065_17
Oscillibacter sp. 1-3, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12951..13907
DNA (957bp) protein (319aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. 1-3 RepID=R9LXX2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS63368.1}; TaxID=1235797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. 1-3.;"
putative metalloendopeptidase
L3_106_000M1_scaffold_1065_18
Oscillibacter sp. 1-3, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13870..14466
DNA (597bp) protein (199aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. 1-3 RepID=R9LX36_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS63369.1}; TaxID=1235797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. 1-3.;"
peptidase M50 family protein
L3_106_000M1_scaffold_1065_19
Oscillibacter sp. 1-3, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


14593..14934
DNA (342bp) protein (114aa)
50S ribosomal protein L19 n=1 Tax=Oscillibacter sp. 1-3 RepID=R9LX50_9FIRM
50S ribosomal protein L19 {ECO:0000256|HAMAP-Rule:MF_00402, ECO:0000256|RuleBase:RU000559}; TaxID=1235797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. 1-3.;"
rplS; 50S ribosomal protein L19
L3_106_000M1_scaffold_1065_20
Oscillibacter sp. CAG:155, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15056..15631
DNA (576bp) protein (192aa)
Signal peptidase I {ECO:0000256|RuleBase:RU362042}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU362042};; TaxID=1262910 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:155.;"
signal peptidase I (EC:3.4.21.89)
Signal peptidase I n=1 Tax=Oscillibacter sp. CAG:155 RepID=R6TH77_9FIRM
L3_106_000M1_scaffold_1065_21
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15648..16226
DNA (579bp) protein (193aa)
Signal peptidase I {ECO:0000256|RuleBase:RU362042}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU362042};; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
signal peptidase I (EC:3.4.21.89)
Signal peptidase I n=2 Tax=Oscillibacter RepID=U2R7J1_9FIRM
L3_106_000M1_scaffold_1065_22
Oscillibacter sp. 1-3, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16253..17128
DNA (876bp) protein (292aa)
Ribosome biogenesis GTPase A n=1 Tax=Oscillibacter sp. 1-3 RepID=R9LXX4_9FIRM
Ribosome biogenesis GTPase A {ECO:0000256|PIRNR:PIRNR006230}; TaxID=1235797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. 1-3.;"
putative GTP-binding protein
L3_106_000M1_scaffold_1065_23
unknown

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17149..17790
DNA (642bp) protein (214aa)

This feature has no annotations

L3_106_000M1_scaffold_1065_24
Lachnospiraceae bacterium COE1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17834..18493
DNA (660bp) protein (220aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium COE1 RepID=R9KZR1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS52044.1}; TaxID=1235793 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium COE1.;"
L3_106_000M1_scaffold_1065_25
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18496..19116
DNA (621bp) protein (207aa)
Ribonuclease HII {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SAAS00016879}; Short=RNase HII {ECO:0000256|HAMAP-Rule:MF_00052};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SAAS00016872};; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
rnhB; ribonuclease HII (EC:3.1.26.4)
Ribonuclease HII n=2 Tax=Oscillibacter RepID=U2QNL0_9FIRM
L3_106_000M1_scaffold_1065_26
Oscillibacter valericigenes, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19113..19472
DNA (360bp) protein (120aa)
UPF0102 protein OBV_19280 n=1 Tax=Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 / Sjm18-20) RepID=G4L1A9_OSCVS
hypothetical protein
UPF0102 protein OBV_19280 {ECO:0000256|HAMAP-Rule:MF_00048}; TaxID=693746 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 /; Sjm18-20).;"
L3_106_000M1_scaffold_1065_27
Oscillibacter sp. 1-3, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19505..20992
DNA (1488bp) protein (496aa)
thrC; threonine synthase (EC:4.2.3.1)
Threonine synthase n=1 Tax=Oscillibacter sp. 1-3 RepID=R9LX44_9FIRM
Threonine synthase {ECO:0000313|EMBL:EOS63379.1}; TaxID=1235797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. 1-3.;"
L3_106_000M1_scaffold_1065_28
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21035..21307
DNA (273bp) protein (91aa)
Uncharacterized protein n=2 Tax=Oscillibacter RepID=U2REE5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK66899.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
L3_106_000M1_scaffold_1065_29
Oscillibacter sp. CAG:155, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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21308..22006
DNA (699bp) protein (233aa)
Putative hydrolase n=1 Tax=Oscillibacter sp. CAG:155 RepID=R6TH95_9FIRM
Putative hydrolase {ECO:0000313|EMBL:CDC69029.1}; TaxID=1262910 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:155.;"
putative hydrolase
L3_106_000M1_scaffold_1065_30
Fusobacterium ulcerans, Fusobacterium, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

comp(22091..22792)
DNA (702bp) protein (234aa)
5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase {ECO:0000256|SAAS:SAAS00035261}; EC=3.2.2.9 {ECO:0000256|SAAS:SAAS00035196};; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 1 {ECO:0000256|SAAS:SAAS00035231}; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 2 {ECO:0000256|SAAS:SAAS00035188}; TaxID=469617 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium.;" source="Fusobacterium ulcerans ATCC 49185.;"
methylthioadenosine nucleosidase (EC:3.2.2.9 3.2.2.16)
MTA/SAH nucleosidase n=1 Tax=Fusobacterium ulcerans ATCC 49185 RepID=V9HAC1_9FUSO
Displaying items 1-30 of 54 in total

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