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L3_106_000M1_scaffold_1115

Search features with annotation key words

Displaying items 1-30 of 55 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_106_000M1_scaffold_1115_1
Firmicutes bacterium ASF500, Firmicutes, Bacteria

Not on your lists

comp(1..306)
DNA (306bp) protein (102aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium ASF500 RepID=V2YKH7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ESL15726.1}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
fliC; flagellin
L3_106_000M1_scaffold_1115_2
Oscillibacter sp. 1-3, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

606..1979
DNA (1374bp) protein (458aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. 1-3 RepID=R9M2G1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS65170.1}; TaxID=1235797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. 1-3.;"
ATPase-like protein
L3_106_000M1_scaffold_1115_3
Oscillibacter sp. 1-3, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1931..2770)
DNA (840bp) protein (280aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. 1-3 RepID=R9M282_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS65169.1}; TaxID=1235797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. 1-3.;"
hypothetical protein
L3_106_000M1_scaffold_1115_4
Oscillibacter sp. 1-3, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2820..4658)
DNA (1839bp) protein (613aa)
Cell division protein FtsA n=1 Tax=Oscillibacter sp. 1-3 RepID=R9M2U9_9FIRM
Cell division protein FtsA {ECO:0000313|EMBL:EOS65168.1}; TaxID=1235797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. 1-3.;"
ftsA; putative cell division protein FtsA
L3_106_000M1_scaffold_1115_5
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4685..5062)
DNA (378bp) protein (126aa)
Putative chemotaxis protein CheY n=3 Tax=Clostridiales RepID=G9YTU5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF55153.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
cheY; chemotaxis protein CheY
L3_106_000M1_scaffold_1115_6
unknown

Not on your lists

comp(5049..5558)
DNA (510bp) protein (170aa)

This feature has no annotations

L3_106_000M1_scaffold_1115_7
Oscillibacter valericigenes, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5587..7314)
DNA (1728bp) protein (576aa)
Uncharacterized protein n=1 Tax=Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 / Sjm18-20) RepID=G4KS25_OSCVS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL00042.1}; TaxID=693746 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 /; Sjm18-20).;"
L3_106_000M1_scaffold_1115_8
Oscillibacter sp. 1-3, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7480..9255)
DNA (1776bp) protein (592aa)
X-X-X-Leu-X-X-Gly heptad repeats protein n=1 Tax=Oscillibacter sp. 1-3 RepID=R9MBB9_9FIRM
X-X-X-Leu-X-X-Gly heptad repeats protein {ECO:0000313|EMBL:EOS65167.1}; TaxID=1235797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. 1-3.;"
Methyl-accepting chemotaxis protein
L3_106_000M1_scaffold_1115_9
Oscillibacter sp. 1-3, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9327..10052)
DNA (726bp) protein (242aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. 1-3 RepID=R9M3A1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS65166.1}; TaxID=1235797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. 1-3.;"
ftsE; putative cell division protein FtsE
L3_106_000M1_scaffold_1115_10
Oscillibacter sp. 1-3, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10168..11034
DNA (867bp) protein (289aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. 1-3 RepID=R9M2F6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS65165.1}; TaxID=1235797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. 1-3.;"
hypothetical protein
L3_106_000M1_scaffold_1115_11
Oscillibacter sp. 1-3, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11061..11465)
DNA (405bp) protein (135aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. 1-3 RepID=R9M277_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS65164.1}; TaxID=1235797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. 1-3.;"
hypothetical protein
L3_106_000M1_scaffold_1115_12
Oscillibacter sp. 1-3, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11480..11857)
DNA (378bp) protein (126aa)
Flagellar protein FliS n=1 Tax=Oscillibacter sp. 1-3 RepID=R9M2U5_9FIRM
Flagellar protein FliS {ECO:0000313|EMBL:EOS65163.1}; TaxID=1235797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. 1-3.;"
fliS; flagellar protein FliS
L3_106_000M1_scaffold_1115_13
Oscillibacter sp. 1-3, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11880..14387)
DNA (2508bp) protein (836aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. 1-3 RepID=R9MBB3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS65162.1}; TaxID=1235797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. 1-3.;"
fliD; flagellar hook-associated protein 2
L3_106_000M1_scaffold_1115_14
Oscillibacter sp. 1-3, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14555..15334
DNA (780bp) protein (260aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. 1-3 RepID=R9M394_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS65161.1}; TaxID=1235797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. 1-3.;"
parA; chromosome partitioning protein ParA
L3_106_000M1_scaffold_1115_15
Oscillibacter sp. 1-3, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15374..16054
DNA (681bp) protein (227aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. 1-3 RepID=R9M2F1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS65160.1}; TaxID=1235797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. 1-3.;"
hypothetical protein
L3_106_000M1_scaffold_1115_16
Oscillibacter sp. 1-3, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16113..17402)
DNA (1290bp) protein (430aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. 1-3 RepID=R9M2U1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS65158.1}; TaxID=1235797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. 1-3.;"
hypothetical protein
L3_106_000M1_scaffold_1115_17
Oscillibacter sp. 1-3, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17420..18343)
DNA (924bp) protein (308aa)
Two-component system, chemotaxis family, response regulator CheV n=1 Tax=Oscillibacter sp. 1-3 RepID=R9MBA7_9FIRM
Two-component system, chemotaxis family, response regulator CheV {ECO:0000313|EMBL:EOS65157.1}; TaxID=1235797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. 1-3.;"
cheV; chemotaxis protein CheV
L3_106_000M1_scaffold_1115_18
Oscillibacter sp. 1-3, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18373..18852)
DNA (480bp) protein (160aa)
Probable chemoreceptor glutamine deamidase CheD {ECO:0000256|HAMAP-Rule:MF_01440}; EC=3.5.1.44 {ECO:0000256|HAMAP-Rule:MF_01440};; TaxID=1235797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. 1-3.;"
cheD; chemoreceptor glutamine deamidase CheD (EC:3.5.1.44)
Probable chemoreceptor glutamine deamidase CheD n=1 Tax=Oscillibacter sp. 1-3 RepID=R9M390_9FIRM
L3_106_000M1_scaffold_1115_19
Oscillibacter sp. 1-3, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18842..19471)
DNA (630bp) protein (210aa)
Chemotaxis protein CheC n=1 Tax=Oscillibacter sp. 1-3 RepID=R9M2E5_9FIRM
Chemotaxis protein CheC {ECO:0000313|EMBL:EOS65155.1}; TaxID=1235797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. 1-3.;"
cheC; chemotaxis protein CheC
L3_106_000M1_scaffold_1115_20
Oscillibacter sp. 1-3, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19486..20232)
DNA (747bp) protein (249aa)
Flagellar hook-basal body protein n=1 Tax=Oscillibacter sp. 1-3 RepID=R9M266_9FIRM
Flagellar hook-basal body protein {ECO:0000313|EMBL:EOS65154.1}; TaxID=1235797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. 1-3.;"
flgG; flagellar basal-body rod protein FlgG
L3_106_000M1_scaffold_1115_21
Oscillibacter sp. 1-3, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20248..20997)
DNA (750bp) protein (250aa)
Flagellar hook-basal body protein n=1 Tax=Oscillibacter sp. 1-3 RepID=R9M2T6_9FIRM
Flagellar hook-basal body protein {ECO:0000313|EMBL:EOS65153.1}; TaxID=1235797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. 1-3.;"
flhO; flagellar hook-basal body complex protein FlhO
L3_106_000M1_scaffold_1115_22
Oscillibacter sp. 1-3, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20973..21839)
DNA (867bp) protein (289aa)
FliA/WhiG family RNA polymerase sigma factor n=1 Tax=Oscillibacter sp. 1-3 RepID=R9MBA2_9FIRM
FliA/WhiG family RNA polymerase sigma factor {ECO:0000313|EMBL:EOS65152.1}; TaxID=1235797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. 1-3.;"
fliA; RNA polymerase sigma factor for flagellar operon
L3_106_000M1_scaffold_1115_23
Oscillibacter sp. 1-3, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21836..23956)
DNA (2121bp) protein (707aa)
Flagellar biosynthesis protein FlhA n=1 Tax=Oscillibacter sp. 1-3 RepID=R9M386_9FIRM
Flagellar biosynthesis protein FlhA {ECO:0000313|EMBL:EOS65151.1}; TaxID=1235797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. 1-3.;"
flhA; flagellar biosynthesis protein FlhA
L3_106_000M1_scaffold_1115_24
Oscillibacter sp. 1-3, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24041..25099)
DNA (1059bp) protein (353aa)
Flagellar biosynthetic protein FlhB n=1 Tax=Oscillibacter sp. 1-3 RepID=R9M2E0_9FIRM
Flagellar biosynthetic protein FlhB {ECO:0000313|EMBL:EOS65150.1}; TaxID=1235797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. 1-3.;"
flhB; flagellar biosynthetic protein FlhB
L3_106_000M1_scaffold_1115_25
Oscillibacter sp. 1-3, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25136..25900)
DNA (765bp) protein (255aa)
Flagellar biosynthetic protein FliR n=1 Tax=Oscillibacter sp. 1-3 RepID=R9M260_9FIRM
Flagellar biosynthetic protein FliR {ECO:0000313|EMBL:EOS65149.1}; TaxID=1235797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. 1-3.;"
fliR; flagellar biosynthetic protein FliR
L3_106_000M1_scaffold_1115_26
Oscillibacter sp. 1-3, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25916..26176)
DNA (261bp) protein (87aa)
Flagellar biosynthetic protein FliQ n=1 Tax=Oscillibacter sp. 1-3 RepID=R9M2T0_9FIRM
Flagellar biosynthetic protein FliQ {ECO:0000313|EMBL:EOS65148.1}; TaxID=1235797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. 1-3.;"
fliQ; flagellar biosynthetic protein FliQ
L3_106_000M1_scaffold_1115_27
Oscillibacter sp. 1-3, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26195..26866)
DNA (672bp) protein (224aa)
Flagellar biosynthetic protein FliP n=1 Tax=Oscillibacter sp. 1-3 RepID=R9MB98_9FIRM
Flagellar biosynthetic protein FliP {ECO:0000313|EMBL:EOS65147.1}; TaxID=1235797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. 1-3.;"
fliP; flagellar biosynthetic protein FliP
L3_106_000M1_scaffold_1115_28
Oscillibacter sp. 1-3, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26874..27239)
DNA (366bp) protein (122aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. 1-3 RepID=R9M381_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS65146.1}; TaxID=1235797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. 1-3.;"
L3_106_000M1_scaffold_1115_29
Oscillibacter sp. 1-3, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27249..27617)
DNA (369bp) protein (123aa)
Two-component system, chemotaxis family, response regulator CheY n=1 Tax=Oscillibacter sp. 1-3 RepID=R9M2D6_9FIRM
Two-component system, chemotaxis family, response regulator CheY {ECO:0000313|EMBL:EOS65145.1}; TaxID=1235797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. 1-3.;"
cheY; chemotaxis protein CheY
L3_106_000M1_scaffold_1115_30
Oscillibacter sp. 1-3, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27672..29048)
DNA (1377bp) protein (459aa)
Flagellar motor switch protein FliN n=1 Tax=Oscillibacter sp. 1-3 RepID=R9M254_9FIRM
Flagellar motor switch protein FliN {ECO:0000313|EMBL:EOS65144.1}; TaxID=1235797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. 1-3.;"
chemotaxis protein CheC
Displaying items 1-30 of 55 in total

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