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L3_106_000M1_scaffold_4773

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_106_000M1_scaffold_4773_1
Kyrpidia tusciae, Kyrpidia, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(3..83)
DNA (81bp) protein (27aa)
translation elongation factor Tu (EC:2.7.7.4)
Elongation factor Tu n=1 Tax=Kyrpidia tusciae (strain DSM 2912 / NBRC 15312 / T2) RepID=D5WRR8_KYRT2
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; TaxID=562970 species="Bacteria; Firmicutes; Bacilli; Bacillales; Alicyclobacillaceae; Kyrpidia.;" source="Kyrpidia tusciae (strain DSM 2912 / NBRC 15312 / T2) (Bacillus; tusciae).;"
L3_106_000M1_scaffold_4773_2
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(394..2001)
DNA (1608bp) protein (536aa)
VanW family protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5BI91_9CLOT
VanW family protein {ECO:0000313|EMBL:CCX51161.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
von Willebrand factor A
L3_106_000M1_scaffold_4773_3
[Clostridium] methylpentosum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2282..2848)
DNA (567bp) protein (189aa)
Uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EDE3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEG30529.1}; TaxID=537013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] methylpentosum DSM 5476.;"
hypothetical protein
L3_106_000M1_scaffold_4773_4
Caloranaerobacter azorensis, Caloranaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3010..3648)
DNA (639bp) protein (213aa)
Redox-sensing transcriptional repressor Rex n=1 Tax=Mahella australiensis (strain DSM 15567 / CIP 107919 / 50-1 BON) RepID=F3ZY65_MAHA5
Redox-sensing transcriptional repressor Rex {ECO:0000256|HAMAP-Rule:MF_01131}; TaxID=1156417 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caloranaerobacter.;" source="Caloranaerobacter azorensis H53214.;"
CoA-binding domain-containing protein
L3_106_000M1_scaffold_4773_5
Clostridium sp. CAG:505, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3710..5650)
DNA (1941bp) protein (647aa)
Aconitate hydratase n=2 Tax=Firmicutes RepID=R7B9L5_9CLOT
Aconitate hydratase {ECO:0000313|EMBL:CDD61760.1}; TaxID=1262814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:505.;"
aconitate hydratase
L3_106_000M1_scaffold_4773_6
Thermobrachium celere, Thermobrachium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5841..6098
DNA (258bp) protein (86aa)
Uncharacterized protein n=1 Tax=Thermobrachium celere DSM 8682 RepID=R7RTE4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDF59324.1}; TaxID=941824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Thermobrachium.;" source="Thermobrachium celere DSM 8682.;"
hypothetical protein
L3_106_000M1_scaffold_4773_7
Firmicutes bacterium CAG:41, Firmicutes, Bacteria

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6161..6358
DNA (198bp) protein (66aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:41 RepID=R6MTX4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB99319.1}; TaxID=1263021 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:41.;"
membrane protein
L3_106_000M1_scaffold_4773_8
Desulfitobacterium metallireducens, Desulfitobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6618..7070
DNA (453bp) protein (151aa)
Transcriptional regulator, MarR family n=1 Tax=Desulfitobacterium metallireducens DSM 15288 RepID=G6GIX7_9FIRM
MarR family transcriptional regulator
MarR family transcriptional regulator {ECO:0000313|EMBL:AHF08174.1}; TaxID=871968 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfitobacterium.;" source="Desulfitobacterium metallireducens DSM 15288.;"
L3_106_000M1_scaffold_4773_9
Clostridium bornimense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7095..8912
DNA (1818bp) protein (606aa)
ftsH3; ATP-dependent zinc metalloprotease FtsH (EC:3.4.24.-)
ATP-dependent zinc metalloprotease FtsH {ECO:0000256|HAMAP-Rule:MF_01458, ECO:0000313|EMBL:CDM67984.1}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_01458, ECO:0000313|EMBL:CDM67984.1};; TaxID=1216932 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium bornimense.;"
ATP-dependent zinc metalloprotease FtsH n=1 Tax=Desulfitobacterium metallireducens DSM 15288 RepID=G6GIX6_9FIRM
L3_106_000M1_scaffold_4773_10
Clostridiales bacterium oral taxon 876, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9306..10394)
DNA (1089bp) protein (363aa)
NADP-dependent alcohol dehydrogenase n=1 Tax=Clostridiales bacterium oral taxon 876 str. F0540 RepID=U2CY39_9FIRM
NADP-dependent alcohol dehydrogenase {ECO:0000313|EMBL:ERI89480.1}; TaxID=1321778 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium oral taxon 876 str. F0540.;"
alcohol dehydrogenase
L3_106_000M1_scaffold_4773_11
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10850..11374)
DNA (525bp) protein (175aa)
Acetyltransferases, including N-acetylases of ribosomal proteins (EC:2.3.1.128)
Acetyltransferase, GNAT family n=2 Tax=Oscillibacter RepID=U2REC3_9FIRM
Acetyltransferase, GNAT family {ECO:0000313|EMBL:ERK66879.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
L3_106_000M1_scaffold_4773_12
Acidaminococcus fermentans, Acidaminococcus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(11653..12195)
DNA (543bp) protein (181aa)
Rubrerythrin n=1 Tax=Caloramator australicus RC3 RepID=G0V3L2_9CLOT
rubrerythrin
Rubrerythrin {ECO:0000313|EMBL:ADB46711.1}; TaxID=591001 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Acidaminococcus.;" source="Acidaminococcus fermentans (strain ATCC 25085 / DSM 20731 / VR4).;"
L3_106_000M1_scaffold_4773_13
Desulfosporosinus sp. OT, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(12299..12799)
DNA (501bp) protein (167aa)
hypothetical protein n=1 Tax=Dehalobacter sp. FTH1 RepID=UPI00035CBF5A
Thioesterase superfamily protein {ECO:0000313|EMBL:EGW41312.1}; TaxID=913865 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus sp. OT.;"
uncharacterized protein, possibly involved in aromatic compounds catabolism
L3_106_000M1_scaffold_4773_14
unknown

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12925..13005
DNA (81bp) protein (27aa)

This feature has no annotations

Displaying 14 items

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